RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 ATP6V1AP38606 617 aa35.7■■■■□ 3.31
SRSF9-202ENST00000546942 LINC00116Q8NCU8 138 aa35.69■■■■□ 3.3
SRSF9-202ENST00000546942 MSL1Q68DK7 614 aa35.68■■■■□ 3.3
SRSF9-202ENST00000546942 SMIM5Q71RC9 77 aa35.68■■■■□ 3.3
SRSF9-202ENST00000546942 ITPK1Q13572 414 aa35.67■■■■□ 3.3
SRSF9-202ENST00000546942 RBM42Q9BTD8 480 aaKnown RBP35.67■■■■□ 3.3
SRSF9-202ENST00000546942 PHF14O94880 888 aa35.66■■■■□ 3.3
SRSF9-202ENST00000546942 FLAD1Q8NFF5 587 aa35.66■■■■□ 3.3
SRSF9-202ENST00000546942 COL24A1Q17RW2 1714 aa35.66■■■■□ 3.3
SRSF9-202ENST00000546942 U2SURPO15042 1029 aaKnown RBP35.64■■■■□ 3.3
SRSF9-202ENST00000546942 AMIGO3Q86WK7 504 aa35.64■■■■□ 3.3
SRSF9-202ENST00000546942 UBR3Q6ZT12 1888 aa35.63■■■■□ 3.29
SRSF9-202ENST00000546942 NFATC2IPQ8NCF5 419 aa35.63■■■■□ 3.29
SRSF9-202ENST00000546942 AKAP4Q5JQC9 854 aa35.61■■■■□ 3.29
SRSF9-202ENST00000546942 SCN11AQ9UI33 1791 aa35.61■■■■□ 3.29
SRSF9-202ENST00000546942 COL3A1P02461 1466 aaPredicted RBP35.6■■■■□ 3.29
SRSF9-202ENST00000546942 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.59■■■■□ 3.29
SRSF9-202ENST00000546942 GNPATO15228 680 aa35.58■■■■□ 3.29
SRSF9-202ENST00000546942 SLC4A9Q96Q91 983 aa35.58■■■■□ 3.29
SRSF9-202ENST00000546942 MTHFSDQ2M296 383 aaKnown RBP35.57■■■■□ 3.28
SRSF9-202ENST00000546942 LGR6Q9HBX8 967 aa35.57■■■■□ 3.28
SRSF9-202ENST00000546942 VIRMAQ69YN4 1812 aaKnown RBP35.56■■■■□ 3.28
SRSF9-202ENST00000546942 PTCD1O75127 700 aaKnown RBP35.56■■■■□ 3.28
SRSF9-202ENST00000546942 MAP3K5Q99683 1374 aa35.55■■■■□ 3.28
SRSF9-202ENST00000546942 SSFA2P28290 1259 aa35.54■■■■□ 3.28
SRSF9-202ENST00000546942 CFAP53Q96M91 514 aa35.54■■■■□ 3.28
SRSF9-202ENST00000546942 YY1P25490 414 aa35.52■■■■□ 3.28
SRSF9-202ENST00000546942 RNMTO43148 476 aaKnown RBP35.51■■■■□ 3.28
SRSF9-202ENST00000546942 PPP2R1AP30153 589 aa35.51■■■■□ 3.28
SRSF9-202ENST00000546942 ZNF831Q5JPB2 1677 aa35.49■■■■□ 3.27
SRSF9-202ENST00000546942 NLGN2Q8NFZ4 835 aa35.49■■■■□ 3.27
SRSF9-202ENST00000546942 SLC52A2Q9HAB3 445 aa35.49■■■■□ 3.27
SRSF9-202ENST00000546942 COL5A3P25940 1745 aaPredicted RBP35.48■■■■□ 3.27
SRSF9-202ENST00000546942 PELP1Q8IZL8 1130 aaKnown RBP35.47■■■■□ 3.27
SRSF9-202ENST00000546942 RTCBQ9Y3I0 505 aaKnown RBP35.47■■■■□ 3.27
SRSF9-202ENST00000546942 UTRNP46939 3433 aa35.46■■■■□ 3.27
SRSF9-202ENST00000546942 GPR162Q16538 588 aa35.45■■■■□ 3.27
SRSF9-202ENST00000546942 TRAPPC3LQ5T215 181 aa35.45■■■■□ 3.27
SRSF9-202ENST00000546942 SLC39A6Q13433 755 aa35.43■■■■□ 3.26
SRSF9-202ENST00000546942 RC3H1Q5TC82 1133 aaKnown RBP35.43■■■■□ 3.26
SRSF9-202ENST00000546942 NUDCQ9Y266 331 aa35.43■■■■□ 3.26
SRSF9-202ENST00000546942 MYH14Q7Z406 1995 aaKnown RBP35.42■■■■□ 3.26
SRSF9-202ENST00000546942 CNTNAP4Q9C0A0 1308 aa35.41■■■■□ 3.26
SRSF9-202ENST00000546942 GAS2L2Q8NHY3 880 aa35.4■■■■□ 3.26
SRSF9-202ENST00000546942 U2AF1L5P0DN76 240 aaPredicted RBP35.39■■■■□ 3.26
SRSF9-202ENST00000546942 PRKAR2BP31323 418 aa35.39■■■■□ 3.26
SRSF9-202ENST00000546942 U2AF1Q01081 240 aaKnown RBP eCLIP35.39■■■■□ 3.26
SRSF9-202ENST00000546942 TJP1Q07157 1748 aa35.39■■■■□ 3.26
SRSF9-202ENST00000546942 MRC1P22897 1456 aa35.39■■■■□ 3.26
SRSF9-202ENST00000546942 GOLGB1Q14789 3259 aaKnown RBP35.38■■■■□ 3.25
SRSF9-202ENST00000546942 RPS6KA4O75676 772 aa35.38■■■■□ 3.25
SRSF9-202ENST00000546942 CRKLP46109 303 aaKnown RBP35.38■■■■□ 3.25
SRSF9-202ENST00000546942 ARHGEF1Q92888 912 aaKnown RBP35.38■■■■□ 3.25
SRSF9-202ENST00000546942 PHACTR3Q96KR7 559 aa35.38■■■■□ 3.25
SRSF9-202ENST00000546942 ADAMTS7Q9UKP4 1686 aa35.37■■■■□ 3.25
SRSF9-202ENST00000546942 GNAT3A8MTJ3 354 aa35.37■■■■□ 3.25
SRSF9-202ENST00000546942 RSPH6AQ9H0K4 717 aa35.37■■■■□ 3.25
SRSF9-202ENST00000546942 RFC4P35249 363 aa35.35■■■■□ 3.25
SRSF9-202ENST00000546942 CD2APQ9Y5K6 639 aa35.35■■■■□ 3.25
SRSF9-202ENST00000546942 DNAJC10Q8IXB1 793 aa35.34■■■■□ 3.25
SRSF9-202ENST00000546942 ADRA2BP18089 450 aa35.33■■■■□ 3.25
SRSF9-202ENST00000546942 IL17REQ8NFR9 667 aa35.33■■■■□ 3.25
SRSF9-202ENST00000546942 CHD4Q14839 1912 aa35.33■■■■□ 3.25
SRSF9-202ENST00000546942 TEFQ10587 303 aa35.32■■■■□ 3.24
SRSF9-202ENST00000546942 MMP10P09238 476 aa35.31■■■■□ 3.24
SRSF9-202ENST00000546942 KCPQ6ZWJ8 1503 aa35.29■■■■□ 3.24
SRSF9-202ENST00000546942 C4AP0C0L4 1744 aa35.29■■■■□ 3.24
SRSF9-202ENST00000546942 CICQ96RK0 1608 aaPredicted RBP35.28■■■■□ 3.24
SRSF9-202ENST00000546942 INTS5Q6P9B9 1019 aaKnown RBP35.28■■■■□ 3.24
SRSF9-202ENST00000546942 TTC5Q8N0Z6 440 aa35.28■■■■□ 3.24
SRSF9-202ENST00000546942 NLGN1Q8N2Q7 840 aa35.28■■■■□ 3.24
SRSF9-202ENST00000546942 CCDC87Q9NVE4 849 aa35.27■■■■□ 3.24
SRSF9-202ENST00000546942 FCHSD2O94868 740 aa35.26■■■■□ 3.24
SRSF9-202ENST00000546942 GYS1P13807 737 aa35.26■■■■□ 3.24
SRSF9-202ENST00000546942 YBX3P16989 372 aaKnown RBP eCLIP35.26■■■■□ 3.24
SRSF9-202ENST00000546942 SRP68Q9UHB9 627 aaKnown RBP35.25■■■■□ 3.23
SRSF9-202ENST00000546942 CYP19A1P11511 503 aaPredicted RBP35.24■■■■□ 3.23
SRSF9-202ENST00000546942 DDX10Q13206 875 aaKnown RBP35.24■■■■□ 3.23
SRSF9-202ENST00000546942 WWC3Q9ULE0 1092 aa35.24■■■■□ 3.23
SRSF9-202ENST00000546942 SIPA1L3O60292 1781 aaPredicted RBP35.23■■■■□ 3.23
SRSF9-202ENST00000546942 UBR2Q8IWV8 1755 aa35.23■■■■□ 3.23
SRSF9-202ENST00000546942 ZNF790Q6PG37 636 aa35.2■■■■□ 3.23
SRSF9-202ENST00000546942 VSIG10Q8N0Z9 540 aa35.2■■■■□ 3.23
SRSF9-202ENST00000546942 RTF1Q92541 710 aaKnown RBP35.19■■■■□ 3.22
SRSF9-202ENST00000546942 ZNF496Q96IT1 587 aaPredicted RBP35.19■■■■□ 3.22
SRSF9-202ENST00000546942 PARP3Q9Y6F1 533 aa35.19■■■■□ 3.22
SRSF9-202ENST00000546942 USP42Q9H9J4 1324 aaKnown RBP35.18■■■■□ 3.22
SRSF9-202ENST00000546942 GRIN3BO60391 1043 aa35.18■■■■□ 3.22
SRSF9-202ENST00000546942 MCM10Q7L590 875 aa35.18■■■■□ 3.22
SRSF9-202ENST00000546942 CEMIPQ8WUJ3 1361 aa35.17■■■■□ 3.22
SRSF9-202ENST00000546942 ZBTB1Q9Y2K1 713 aa35.17■■■■□ 3.22
SRSF9-202ENST00000546942 SOS1Q07889 1333 aaPredicted RBP35.16■■■■□ 3.22
SRSF9-202ENST00000546942 BTBD11A6QL63 1104 aa35.16■■■■□ 3.22
SRSF9-202ENST00000546942 ZPR1O75312 459 aa35.16■■■■□ 3.22
SRSF9-202ENST00000546942 FKBP8Q14318 412 aa35.16■■■■□ 3.22
SRSF9-202ENST00000546942 CANXP27824 592 aaKnown RBP35.15■■■■□ 3.22
SRSF9-202ENST00000546942 DCTN1Q14203 1278 aa35.15■■■■□ 3.22
SRSF9-202ENST00000546942 STARD3NLO95772 234 aa35.14■■■■□ 3.22
SRSF9-202ENST00000546942 KCNQ3O43525 872 aa35.13■■■■□ 3.21
SRSF9-202ENST00000546942 NEFMP07197 916 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms