RNA–Protein interactions for RNA: ENST00000546769.1

PKP2-205, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-205ENST00000546769 ANKRD50Q9ULJ7 1429 aa11.08□□□□□ -0.64
PKP2-205ENST00000546769 NPHP3Q7Z494 1330 aa11.08□□□□□ -0.64
PKP2-205ENST00000546769 NR1I2O75469 434 aa11.07□□□□□ -0.64
PKP2-205ENST00000546769 ZMYND10O75800 440 aa11.07□□□□□ -0.64
PKP2-205ENST00000546769 MDM2Q00987 491 aaPredicted RBP11.07□□□□□ -0.64
PKP2-205ENST00000546769 PUS10Q3MIT2 529 aaKnown RBP11.07□□□□□ -0.64
PKP2-205ENST00000546769 BARGINQ6ZT62 677 aa11.07□□□□□ -0.64
PKP2-205ENST00000546769 ZC3H15Q8WU90 426 aaKnown RBP11.07□□□□□ -0.64
PKP2-205ENST00000546769 ORAI2Q96SN7 254 aa11.07□□□□□ -0.64
PKP2-205ENST00000546769 DISP2A7MBM2 1401 aa11.07□□□□□ -0.64
PKP2-205ENST00000546769 USP32Q8NFA0 1604 aa11.06□□□□□ -0.64
PKP2-205ENST00000546769 CD46P15529 392 aa11.06□□□□□ -0.64
PKP2-205ENST00000546769 FUT2Q10981 343 aa11.06□□□□□ -0.64
PKP2-205ENST00000546769 KANK4Q5T7N3 995 aaPredicted RBP11.06□□□□□ -0.64
PKP2-205ENST00000546769 SCUBE3Q8IX30 993 aa11.06□□□□□ -0.64
PKP2-205ENST00000546769 SEPT12Q8IYM1 358 aa11.06□□□□□ -0.64
PKP2-205ENST00000546769 GGCXP38435 758 aa11.05□□□□□ -0.64
PKP2-205ENST00000546769 KRT27Q7Z3Y8 459 aa11.05□□□□□ -0.64
PKP2-205ENST00000546769 TMUB1Q9BVT8 246 aa11.05□□□□□ -0.64
PKP2-205ENST00000546769 CDC42BPGQ6DT37 1551 aa11.04□□□□□ -0.64
PKP2-205ENST00000546769 VPS72Q15906 364 aa11.04□□□□□ -0.64
PKP2-205ENST00000546769 MORN1Q5T089 497 aa11.04□□□□□ -0.64
PKP2-205ENST00000546769 PLCH1Q4KWH8 1693 aa11.04□□□□□ -0.64
PKP2-205ENST00000546769 LRPPRCP42704 1394 aaKnown RBP11.03□□□□□ -0.64
PKP2-205ENST00000546769 HFM1A2PYH4 1435 aa11.03□□□□□ -0.64
PKP2-205ENST00000546769 ADH1BP00325 375 aa11.03□□□□□ -0.64
PKP2-205ENST00000546769 IRX2Q9BZI1 471 aaPredicted RBP11.03□□□□□ -0.64
PKP2-205ENST00000546769 CHIC2Q9UKJ5 165 aa11.03□□□□□ -0.64
PKP2-205ENST00000546769 TNS1Q9HBL0 1735 aaKnown RBP11.03□□□□□ -0.64
PKP2-205ENST00000546769 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
PKP2-205ENST00000546769 PRKD2Q9BZL6 878 aa11.02□□□□□ -0.65
PKP2-205ENST00000546769 GPCPD1Q9NPB8 672 aa11.02□□□□□ -0.65
PKP2-205ENST00000546769 NEXMIFQ5QGS0 1516 aa11.01□□□□□ -0.65
PKP2-205ENST00000546769 RNF223E7ERA6 249 aa11.01□□□□□ -0.65
PKP2-205ENST00000546769 R3HDM1Q15032 1099 aaKnown RBP11.01□□□□□ -0.65
PKP2-205ENST00000546769 ADGRB2O60241 1585 aa11□□□□□ -0.65
PKP2-205ENST00000546769 S1PR4O95977 384 aa11□□□□□ -0.65
PKP2-205ENST00000546769 CLCN1P35523 988 aa11□□□□□ -0.65
PKP2-205ENST00000546769 KRI1Q8N9T8 703 aaKnown RBP11□□□□□ -0.65
PKP2-205ENST00000546769 V9GY48 417 aaPredicted RBP11□□□□□ -0.65
PKP2-205ENST00000546769 PARD3Q8TEW0 1356 aa11□□□□□ -0.65
PKP2-205ENST00000546769 ROBO2Q9HCK4 1378 aa11□□□□□ -0.65
PKP2-205ENST00000546769 NINLQ9Y2I6 1382 aa11□□□□□ -0.65
PKP2-205ENST00000546769 KIF1AQ12756 1690 aa10.99□□□□□ -0.65
PKP2-205ENST00000546769 THAP11Q96EK4 314 aa10.99□□□□□ -0.65
PKP2-205ENST00000546769 FAM217BQ9NTX9 383 aaPredicted RBP10.99□□□□□ -0.65
PKP2-205ENST00000546769 SLC27A5Q9Y2P5 690 aa10.99□□□□□ -0.65
PKP2-205ENST00000546769 SPSB2Q99619 263 aa10.98□□□□□ -0.65
PKP2-205ENST00000546769 REPIN1Q9BWE0 567 aaKnown RBP10.98□□□□□ -0.65
PKP2-205ENST00000546769 SPATA31A3Q5VYP0 1347 aa10.98□□□□□ -0.65
PKP2-205ENST00000546769 CCDC144AA2RUR9 1427 aa10.98□□□□□ -0.65
PKP2-205ENST00000546769 NRAPQ86VF7 1730 aa10.98□□□□□ -0.65
PKP2-205ENST00000546769 ABCA3Q99758 1704 aa10.98□□□□□ -0.65
PKP2-205ENST00000546769 ESCO1Q5FWF5 840 aa10.97□□□□□ -0.65
PKP2-205ENST00000546769 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
PKP2-205ENST00000546769 RREB1Q92766 1687 aa10.97□□□□□ -0.65
PKP2-205ENST00000546769 FOXO3O43524 673 aa10.96□□□□□ -0.65
PKP2-205ENST00000546769 ANKLE1Q8NAG6 615 aa10.96□□□□□ -0.65
PKP2-205ENST00000546769 KIF1BO60333 1816 aa10.95□□□□□ -0.66
PKP2-205ENST00000546769 PPEF1O14829 653 aaPredicted RBP10.95□□□□□ -0.66
PKP2-205ENST00000546769 KDM4AO75164 1064 aa10.95□□□□□ -0.66
PKP2-205ENST00000546769 AMHR2Q16671 573 aa10.95□□□□□ -0.66
PKP2-205ENST00000546769 GRIPAP1Q4V328 841 aa10.95□□□□□ -0.66
PKP2-205ENST00000546769 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
PKP2-205ENST00000546769 EMID1Q96A84 441 aaPredicted RBP10.95□□□□□ -0.66
PKP2-205ENST00000546769 SALL2Q9Y467 1007 aaPredicted RBP10.95□□□□□ -0.66
PKP2-205ENST00000546769 THSD7AQ9UPZ6 1657 aa10.95□□□□□ -0.66
PKP2-205ENST00000546769 SLC24A1O60721 1099 aa10.94□□□□□ -0.66
PKP2-205ENST00000546769 CAMKK2Q96RR4 588 aa10.94□□□□□ -0.66
PKP2-205ENST00000546769 NUP188Q5SRE5 1749 aa10.94□□□□□ -0.66
PKP2-205ENST00000546769 CHD4Q14839 1912 aa10.94□□□□□ -0.66
PKP2-205ENST00000546769 SENP3-EIF4A1A0A087X0R7 540 aa10.93□□□□□ -0.66
PKP2-205ENST00000546769 FMNL1O95466 1100 aaPredicted RBP10.93□□□□□ -0.66
PKP2-205ENST00000546769 XPCQ01831 940 aaPredicted RBP10.93□□□□□ -0.66
PKP2-205ENST00000546769 CCDC9Q9Y3X0 531 aaKnown RBP10.93□□□□□ -0.66
PKP2-205ENST00000546769 TNS3Q68CZ2 1445 aa10.92□□□□□ -0.66
PKP2-205ENST00000546769 FMN2Q9NZ56 1722 aa10.92□□□□□ -0.66
PKP2-205ENST00000546769 ROCK1Q13464 1354 aa10.92□□□□□ -0.66
PKP2-205ENST00000546769 CLTCL1P53675 1640 aa10.92□□□□□ -0.66
PKP2-205ENST00000546769 USP46P62068 366 aa10.92□□□□□ -0.66
PKP2-205ENST00000546769 EZH2Q15910 746 aaKnown RBP10.92□□□□□ -0.66
PKP2-205ENST00000546769 BRICD5Q6PL45 260 aa10.92□□□□□ -0.66
PKP2-205ENST00000546769 RNF19BQ6ZMZ0 732 aa10.92□□□□□ -0.66
PKP2-205ENST00000546769 ZNF784Q8NCA9 323 aaPredicted RBP10.92□□□□□ -0.66
PKP2-205ENST00000546769 CAMTA1Q9Y6Y1 1673 aa10.92□□□□□ -0.66
PKP2-205ENST00000546769 COL14A1Q05707 1796 aaKnown RBP10.91□□□□□ -0.66
PKP2-205ENST00000546769 FAM160A2Q8N612 972 aaPredicted RBP10.91□□□□□ -0.66
PKP2-205ENST00000546769 SPON1Q9HCB6 807 aa10.91□□□□□ -0.66
PKP2-205ENST00000546769 NAIPQ13075 1403 aa10.91□□□□□ -0.66
PKP2-205ENST00000546769 SBNO1A3KN83 1393 aa10.9□□□□□ -0.66
PKP2-205ENST00000546769 NUP155O75694 1391 aa10.9□□□□□ -0.66
PKP2-205ENST00000546769 HOXA2O43364 376 aa10.9□□□□□ -0.66
PKP2-205ENST00000546769 C1QTNF8P60827 252 aa10.9□□□□□ -0.66
PKP2-205ENST00000546769 MYT1Q01538 1121 aa10.9□□□□□ -0.66
PKP2-205ENST00000546769 TTLL12Q14166 644 aaPredicted RBP10.9□□□□□ -0.66
PKP2-205ENST00000546769 PPP1R1BQ9UD71 204 aaPredicted RBP10.9□□□□□ -0.66
PKP2-205ENST00000546769 TECPR2O15040 1411 aa10.9□□□□□ -0.66
PKP2-205ENST00000546769 ARHGEF10O15013 1369 aa10.9□□□□□ -0.67
PKP2-205ENST00000546769 SSTR3P32745 418 aaPredicted RBP10.89□□□□□ -0.67
PKP2-205ENST00000546769 SLC19A1P41440 591 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms