RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 UBE2HP62256 183 aa15.02■□□□□ -0
PTCH1-212ENST00000546744 CCDC150Q8NCX0 1101 aa15.02■□□□□ -0
PTCH1-212ENST00000546744 FMNL2Q96PY5 1086 aa15.02■□□□□ -0
PTCH1-212ENST00000546744 CFAP74Q9C0B2 1584 aa15.02■□□□□ -0
PTCH1-212ENST00000546744 IRX3P78415 501 aaPredicted RBP15.02■□□□□ -0
PTCH1-212ENST00000546744 AMOTL1Q8IY63 956 aa15.02■□□□□ -0
PTCH1-212ENST00000546744 USP25Q9UHP3 1055 aa15.02■□□□□ -0
PTCH1-212ENST00000546744 SSFA2P28290 1259 aa15.02□□□□□ -0.01
PTCH1-212ENST00000546744 CLIP2Q9UDT6 1046 aa15.02□□□□□ -0.01
PTCH1-212ENST00000546744 ABCA9Q8IUA7 1624 aa15.02□□□□□ -0.01
PTCH1-212ENST00000546744 CFAP70Q5T0N1 1121 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 EPB41L2O43491 1005 aaKnown RBP15.01□□□□□ -0.01
PTCH1-212ENST00000546744 KIF5CO60282 957 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 ADCY5O95622 1261 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 RARSP54136 660 aaKnown RBP15.01□□□□□ -0.01
PTCH1-212ENST00000546744 IMMTQ16891 758 aaKnown RBP15.01□□□□□ -0.01
PTCH1-212ENST00000546744 GOLGA6L10A0A0M3HER8 536 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 CDKL5O76039 1030 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 FAM193AP78312 1265 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 ZSCAN23Q3MJ62 389 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 LUZP1Q86V48 1076 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 MAST1Q9Y2H9 1570 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 GAS2L2Q8NHY3 880 aa15.01□□□□□ -0.01
PTCH1-212ENST00000546744 SMC5Q8IY18 1101 aa15□□□□□ -0.01
PTCH1-212ENST00000546744 PDRG1Q9NUG6 133 aa15□□□□□ -0.01
PTCH1-212ENST00000546744 SLC52A1Q9NWF4 448 aa15□□□□□ -0.01
PTCH1-212ENST00000546744 NOL7Q9UMY1 257 aaKnown RBP14.99□□□□□ -0.01
PTCH1-212ENST00000546744 GTF2F1P35269 517 aaKnown RBP eCLIP14.99□□□□□ -0.01
PTCH1-212ENST00000546744 GTF2A1P52655 376 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-212ENST00000546744 DUSP27Q5VZP5 1158 aa14.99□□□□□ -0.01
PTCH1-212ENST00000546744 ZNF397Q8NF99 534 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-212ENST00000546744 HDAC1Q13547 482 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-212ENST00000546744 FBXW7Q969H0 707 aa14.99□□□□□ -0.01
PTCH1-212ENST00000546744 PLXNC1O60486 1568 aa14.99□□□□□ -0.01
PTCH1-212ENST00000546744 URI1O94763 535 aaPredicted RBP14.99□□□□□ -0.01
PTCH1-212ENST00000546744 PLEKHG5O94827 1062 aa14.99□□□□□ -0.01
PTCH1-212ENST00000546744 CEP135Q66GS9 1140 aa14.98□□□□□ -0.01
PTCH1-212ENST00000546744 SMARCC1Q92922 1105 aaPredicted RBP14.98□□□□□ -0.01
PTCH1-212ENST00000546744 ZFYVE16Q7Z3T8 1539 aa14.98□□□□□ -0.01
PTCH1-212ENST00000546744 DYDC1Q8WWB3 177 aa14.98□□□□□ -0.01
PTCH1-212ENST00000546744 CASQ1P31415 396 aa14.98□□□□□ -0.01
PTCH1-212ENST00000546744 DNAAF4Q8WXU2 420 aa14.97□□□□□ -0.01
PTCH1-212ENST00000546744 C16orf45Q96MC5 204 aaPredicted RBP14.97□□□□□ -0.01
PTCH1-212ENST00000546744 FCHSD2O94868 740 aa14.97□□□□□ -0.01
PTCH1-212ENST00000546744 EPS15P42566 896 aa14.97□□□□□ -0.01
PTCH1-212ENST00000546744 SNW1Q13573 536 aaKnown RBP14.97□□□□□ -0.01
PTCH1-212ENST00000546744 ARFGAP3Q9NP61 516 aa14.97□□□□□ -0.01
PTCH1-212ENST00000546744 CFAP100Q494V2 611 aa14.96□□□□□ -0.01
PTCH1-212ENST00000546744 CSB-PGBD3P0DP91 1061 aa14.96□□□□□ -0.01
PTCH1-212ENST00000546744 LIMCH1Q9UPQ0 1083 aa14.96□□□□□ -0.01
PTCH1-212ENST00000546744 ATAD2Q6PL18 1390 aa14.96□□□□□ -0.01
PTCH1-212ENST00000546744 ANAPC15P60006 121 aa14.96□□□□□ -0.01
PTCH1-212ENST00000546744 RAB3GAP1Q15042 981 aa14.96□□□□□ -0.01
PTCH1-212ENST00000546744 RIMBP3CA6NJZ7 1639 aa14.96□□□□□ -0.02
PTCH1-212ENST00000546744 RIMBP3BA6NNM3 1639 aa14.96□□□□□ -0.02
PTCH1-212ENST00000546744 RIMBP3Q9UFD9 1639 aa14.96□□□□□ -0.02
PTCH1-212ENST00000546744 STX1AQ16623 288 aa14.96□□□□□ -0.02
PTCH1-212ENST00000546744 RAB11FIP3O75154 756 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 C8orf34Q49A92 452 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 ANKRD18AQ8IVF6 992 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 TMEM132EQ6IEE7 984 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 TRIM22Q8IYM9 498 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 CTNNA3Q9UI47 895 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 SLU7O95391 586 aaKnown RBP14.95□□□□□ -0.02
PTCH1-212ENST00000546744 FAM200AQ8TCP9 573 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 EID1Q9Y6B2 187 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
PTCH1-212ENST00000546744 TOP1P11387 765 aaKnown RBP14.94□□□□□ -0.02
PTCH1-212ENST00000546744 PRKAR2BP31323 418 aa14.94□□□□□ -0.02
PTCH1-212ENST00000546744 CT47A1Q5JQC4 288 aaPredicted RBP14.94□□□□□ -0.02
PTCH1-212ENST00000546744 WASF1Q92558 559 aa14.94□□□□□ -0.02
PTCH1-212ENST00000546744 ZMYM3Q14202 1370 aa14.94□□□□□ -0.02
PTCH1-212ENST00000546744 ZNF165P49910 485 aa14.94□□□□□ -0.02
PTCH1-212ENST00000546744 KIF4BQ2VIQ3 1234 aa14.94□□□□□ -0.02
PTCH1-212ENST00000546744 TMEM57Q8N5G2 664 aa14.94□□□□□ -0.02
PTCH1-212ENST00000546744 SLC26A8Q96RN1 970 aa14.94□□□□□ -0.02
PTCH1-212ENST00000546744 INSRP06213 1382 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 RPGRIP1LQ68CZ1 1315 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 RALGAPBQ86X10 1494 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 MLH3Q9UHC1 1453 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 IL16Q14005 1332 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 GLRX3O76003 335 aaKnown RBP14.93□□□□□ -0.02
PTCH1-212ENST00000546744 ODF2Q5BJF6 829 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 TTC5Q8N0Z6 440 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 PANK2Q9BZ23 570 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 FBXO31Q5XUX0 539 aaPredicted RBP14.93□□□□□ -0.02
PTCH1-212ENST00000546744 MPNDQ8N594 471 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 JAKMIP1Q96N16 626 aaKnown RBP14.93□□□□□ -0.02
PTCH1-212ENST00000546744 RASSF4Q9H2L5 321 aa14.93□□□□□ -0.02
PTCH1-212ENST00000546744 HMGB1P09429 215 aaKnown RBP14.92□□□□□ -0.02
PTCH1-212ENST00000546744 MX1P20591 662 aa14.92□□□□□ -0.02
PTCH1-212ENST00000546744 CEP131Q9UPN4 1083 aa14.92□□□□□ -0.02
PTCH1-212ENST00000546744 MNAT1P51948 309 aa14.92□□□□□ -0.02
PTCH1-212ENST00000546744 IDI1Q13907 227 aa14.92□□□□□ -0.02
PTCH1-212ENST00000546744 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
PTCH1-212ENST00000546744 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
PTCH1-212ENST00000546744 EIF2S2P20042 333 aaKnown RBP14.92□□□□□ -0.02
PTCH1-212ENST00000546744 C20orf194Q5TEA3 1177 aa14.92□□□□□ -0.02
PTCH1-212ENST00000546744 EHBP1Q8NDI1 1231 aa14.92□□□□□ -0.02
PTCH1-212ENST00000546744 LMAN1P49257 510 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms