RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 FLAD1Q8NFF5 587 aa20.6■□□□□ 0.89
SSH1-204ENST00000546697 RSPH6AQ9H0K4 717 aa20.6■□□□□ 0.89
SSH1-204ENST00000546697 TFCP2L1Q9NZI6 479 aa20.6■□□□□ 0.89
SSH1-204ENST00000546697 COL5A3P25940 1745 aaPredicted RBP20.59■□□□□ 0.89
SSH1-204ENST00000546697 SLC4A9Q96Q91 983 aa20.59■□□□□ 0.89
SSH1-204ENST00000546697 CABP4P57796 275 aa20.58■□□□□ 0.89
SSH1-204ENST00000546697 SLC52A2Q9HAB3 445 aa20.58■□□□□ 0.89
SSH1-204ENST00000546697 NUDCQ9Y266 331 aa20.58■□□□□ 0.89
SSH1-204ENST00000546697 VIRMAQ69YN4 1812 aaKnown RBP20.57■□□□□ 0.88
SSH1-204ENST00000546697 RNMTO43148 476 aaKnown RBP20.57■□□□□ 0.88
SSH1-204ENST00000546697 FCHSD2O94868 740 aa20.57■□□□□ 0.88
SSH1-204ENST00000546697 ITPK1Q13572 414 aa20.57■□□□□ 0.88
SSH1-204ENST00000546697 RALBP1Q15311 655 aa20.57■□□□□ 0.88
SSH1-204ENST00000546697 NFATC2IPQ8NCF5 419 aa20.57■□□□□ 0.88
SSH1-204ENST00000546697 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
SSH1-204ENST00000546697 CEMIPQ8WUJ3 1361 aa20.57■□□□□ 0.88
SSH1-204ENST00000546697 U2SURPO15042 1029 aaKnown RBP20.56■□□□□ 0.88
SSH1-204ENST00000546697 RC3H1Q5TC82 1133 aaKnown RBP20.56■□□□□ 0.88
SSH1-204ENST00000546697 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
SSH1-204ENST00000546697 LINC00116Q8NCU8 138 aa20.56■□□□□ 0.88
SSH1-204ENST00000546697 SSFA2P28290 1259 aa20.55■□□□□ 0.88
SSH1-204ENST00000546697 LGR6Q9HBX8 967 aa20.55■□□□□ 0.88
SSH1-204ENST00000546697 CNTNAP4Q9C0A0 1308 aa20.54■□□□□ 0.88
SSH1-204ENST00000546697 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
SSH1-204ENST00000546697 ATP6V1AP38606 617 aa20.54■□□□□ 0.88
SSH1-204ENST00000546697 ATF5Q9Y2D1 282 aaPredicted RBP20.54■□□□□ 0.88
SSH1-204ENST00000546697 AMIGO3Q86WK7 504 aa20.53■□□□□ 0.88
SSH1-204ENST00000546697 UBR2Q8IWV8 1755 aa20.53■□□□□ 0.88
SSH1-204ENST00000546697 KCPQ6ZWJ8 1503 aa20.53■□□□□ 0.88
SSH1-204ENST00000546697 PRKAR2BP31323 418 aa20.52■□□□□ 0.88
SSH1-204ENST00000546697 CNGB1Q14028 1251 aaPredicted RBP20.52■□□□□ 0.88
SSH1-204ENST00000546697 PHACTR3Q96KR7 559 aa20.52■□□□□ 0.88
SSH1-204ENST00000546697 TJP1Q07157 1748 aa20.52■□□□□ 0.88
SSH1-204ENST00000546697 GNAT3A8MTJ3 354 aa20.51■□□□□ 0.87
SSH1-204ENST00000546697 IL17REQ8NFR9 667 aa20.51■□□□□ 0.87
SSH1-204ENST00000546697 AK7Q96M32 723 aa20.51■□□□□ 0.87
SSH1-204ENST00000546697 PPP1R1BQ9UD71 204 aaPredicted RBP20.51■□□□□ 0.87
SSH1-204ENST00000546697 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
SSH1-204ENST00000546697 ARXQ96QS3 562 aa20.5■□□□□ 0.87
SSH1-204ENST00000546697 U2AF1L5P0DN76 240 aaPredicted RBP20.49■□□□□ 0.87
SSH1-204ENST00000546697 ADRA2BP18089 450 aa20.49■□□□□ 0.87
SSH1-204ENST00000546697 U2AF1Q01081 240 aaKnown RBP eCLIP20.49■□□□□ 0.87
SSH1-204ENST00000546697 VSIG10Q8N0Z9 540 aa20.49■□□□□ 0.87
SSH1-204ENST00000546697 MYH14Q7Z406 1995 aaKnown RBP20.48■□□□□ 0.87
SSH1-204ENST00000546697 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.48■□□□□ 0.87
SSH1-204ENST00000546697 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
SSH1-204ENST00000546697 PLEKHF1Q96S99 279 aa20.47■□□□□ 0.87
SSH1-204ENST00000546697 SYT17Q9BSW7 474 aa20.47■□□□□ 0.87
SSH1-204ENST00000546697 RPS6KA4O75676 772 aa20.46■□□□□ 0.87
SSH1-204ENST00000546697 POLD1P28340 1107 aa20.46■□□□□ 0.87
SSH1-204ENST00000546697 RBM42Q9BTD8 480 aaKnown RBP20.46■□□□□ 0.87
SSH1-204ENST00000546697 FHDC1Q9C0D6 1143 aaPredicted RBP20.46■□□□□ 0.87
SSH1-204ENST00000546697 MYBBP1AQ9BQG0 1328 aaKnown RBP20.46■□□□□ 0.87
SSH1-204ENST00000546697 GNPATO15228 680 aa20.44■□□□□ 0.86
SSH1-204ENST00000546697 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
SSH1-204ENST00000546697 UTRNP46939 3433 aa20.43■□□□□ 0.86
SSH1-204ENST00000546697 RTCBQ9Y3I0 505 aaKnown RBP20.43■□□□□ 0.86
SSH1-204ENST00000546697 C4AP0C0L4 1744 aa20.41■□□□□ 0.86
SSH1-204ENST00000546697 CRKLP46109 303 aaKnown RBP20.41■□□□□ 0.86
SSH1-204ENST00000546697 TEFQ10587 303 aa20.41■□□□□ 0.86
SSH1-204ENST00000546697 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
SSH1-204ENST00000546697 INTS5Q6P9B9 1019 aaKnown RBP20.41■□□□□ 0.86
SSH1-204ENST00000546697 ZNF790Q6PG37 636 aa20.41■□□□□ 0.86
SSH1-204ENST00000546697 PNNQ9H307 717 aaKnown RBP20.41■□□□□ 0.86
SSH1-204ENST00000546697 PRKRIP1Q9H875 184 aaPredicted RBP20.41■□□□□ 0.86
SSH1-204ENST00000546697 CYP19A1P11511 503 aaPredicted RBP20.4■□□□□ 0.86
SSH1-204ENST00000546697 TRAPPC3LQ5T215 181 aa20.4■□□□□ 0.86
SSH1-204ENST00000546697 ARHGEF1Q92888 912 aaKnown RBP20.39■□□□□ 0.85
SSH1-204ENST00000546697 GOLGB1Q14789 3259 aaKnown RBP20.38■□□□□ 0.85
SSH1-204ENST00000546697 HEG1Q9ULI3 1381 aa20.38■□□□□ 0.85
SSH1-204ENST00000546697 DNAJC10Q8IXB1 793 aa20.38■□□□□ 0.85
SSH1-204ENST00000546697 DLG5Q8TDM6 1919 aa20.37■□□□□ 0.85
SSH1-204ENST00000546697 SOS1Q07889 1333 aaPredicted RBP20.37■□□□□ 0.85
SSH1-204ENST00000546697 MSH5O43196 834 aa20.37■□□□□ 0.85
SSH1-204ENST00000546697 PHF14O94880 888 aa20.37■□□□□ 0.85
SSH1-204ENST00000546697 SMIM5Q71RC9 77 aa20.37■□□□□ 0.85
SSH1-204ENST00000546697 ZNF496Q96IT1 587 aaPredicted RBP20.37■□□□□ 0.85
SSH1-204ENST00000546697 CCDC87Q9NVE4 849 aa20.37■□□□□ 0.85
SSH1-204ENST00000546697 CD2APQ9Y5K6 639 aa20.37■□□□□ 0.85
SSH1-204ENST00000546697 NFE2L2Q16236 605 aa20.36■□□□□ 0.85
SSH1-204ENST00000546697 NLGN1Q8N2Q7 840 aa20.36■□□□□ 0.85
SSH1-204ENST00000546697 TEX13AQ9BXU3 409 aaPredicted RBP20.36■□□□□ 0.85
SSH1-204ENST00000546697 USP42Q9H9J4 1324 aaKnown RBP20.35■□□□□ 0.85
SSH1-204ENST00000546697 KIF13BQ9NQT8 1826 aa20.35■□□□□ 0.85
SSH1-204ENST00000546697 GYS1P13807 737 aa20.35■□□□□ 0.85
SSH1-204ENST00000546697 MSL1Q68DK7 614 aa20.35■□□□□ 0.85
SSH1-204ENST00000546697 TTC5Q8N0Z6 440 aa20.35■□□□□ 0.85
SSH1-204ENST00000546697 RTF1Q92541 710 aaKnown RBP20.35■□□□□ 0.85
SSH1-204ENST00000546697 BTBD11A6QL63 1104 aa20.33■□□□□ 0.85
SSH1-204ENST00000546697 NEFMP07197 916 aa20.33■□□□□ 0.85
SSH1-204ENST00000546697 MCM10Q7L590 875 aa20.33■□□□□ 0.85
SSH1-204ENST00000546697 FMNL2Q96PY5 1086 aa20.33■□□□□ 0.85
SSH1-204ENST00000546697 RFC4P35249 363 aa20.32■□□□□ 0.84
SSH1-204ENST00000546697 STARD3NLO95772 234 aa20.31■□□□□ 0.84
SSH1-204ENST00000546697 EIF5P55010 431 aaKnown RBP20.31■□□□□ 0.84
SSH1-204ENST00000546697 TAF7Q15545 349 aaPredicted RBP20.31■□□□□ 0.84
SSH1-204ENST00000546697 ZBTB1Q9Y2K1 713 aa20.31■□□□□ 0.84
SSH1-204ENST00000546697 KDM3BQ7LBC6 1761 aa20.31■□□□□ 0.84
SSH1-204ENST00000546697 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
SSH1-204ENST00000546697 COL15A1P39059 1388 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms