RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 TAS1R3Q7RTX0 852 aa11.8□□□□□ -0.52
CPNE8-204ENST00000546603 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
CPNE8-204ENST00000546603 MKRN1Q9UHC7 482 aaKnown RBP11.8□□□□□ -0.52
CPNE8-204ENST00000546603 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
CPNE8-204ENST00000546603 TMEM229AB2RXF0 380 aa11.78□□□□□ -0.52
CPNE8-204ENST00000546603 VSIG8P0DPA2 414 aa11.78□□□□□ -0.52
CPNE8-204ENST00000546603 ITGA6P23229 1130 aa11.78□□□□□ -0.52
CPNE8-204ENST00000546603 SLC4A9Q96Q91 983 aa11.78□□□□□ -0.52
CPNE8-204ENST00000546603 BACH1O14867 736 aa11.77□□□□□ -0.53
CPNE8-204ENST00000546603 SMTNP53814 917 aa11.77□□□□□ -0.53
CPNE8-204ENST00000546603 PPARGC1BQ86YN6 1023 aaKnown RBP11.77□□□□□ -0.53
CPNE8-204ENST00000546603 SERTAD1Q9UHV2 236 aa11.77□□□□□ -0.53
CPNE8-204ENST00000546603 DYRK1BQ9Y463 629 aa11.77□□□□□ -0.53
CPNE8-204ENST00000546603 LARGE2Q8N3Y3 721 aa11.76□□□□□ -0.53
CPNE8-204ENST00000546603 NANOS1Q8WY41 292 aaKnown RBP11.76□□□□□ -0.53
CPNE8-204ENST00000546603 TIMMDC1Q9NPL8 285 aa11.76□□□□□ -0.53
CPNE8-204ENST00000546603 DNAAF2Q9NVR5 837 aaKnown RBP11.76□□□□□ -0.53
CPNE8-204ENST00000546603 ERBB4Q15303 1308 aa11.76□□□□□ -0.53
CPNE8-204ENST00000546603 ZBTB7BO15156 539 aaPredicted RBP11.75□□□□□ -0.53
CPNE8-204ENST00000546603 CLDN10P78369 228 aa11.75□□□□□ -0.53
CPNE8-204ENST00000546603 LCE2CQ5TA81 110 aa11.75□□□□□ -0.53
CPNE8-204ENST00000546603 OGFOD1Q8N543 542 aa11.75□□□□□ -0.53
CPNE8-204ENST00000546603 RHBDD1Q8TEB9 315 aa11.75□□□□□ -0.53
CPNE8-204ENST00000546603 LMOD1P29536 600 aaPredicted RBP11.74□□□□□ -0.53
CPNE8-204ENST00000546603 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.74□□□□□ -0.53
CPNE8-204ENST00000546603 A6NJY4 79 aa11.73□□□□□ -0.53
CPNE8-204ENST00000546603 WIPF1O43516 503 aa11.73□□□□□ -0.53
CPNE8-204ENST00000546603 CCDC102BQ68D86 513 aa11.73□□□□□ -0.53
CPNE8-204ENST00000546603 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
CPNE8-204ENST00000546603 TPCN2Q8NHX9 752 aa11.73□□□□□ -0.53
CPNE8-204ENST00000546603 ZNF358Q9NW07 568 aa11.73□□□□□ -0.53
CPNE8-204ENST00000546603 RBM19Q9Y4C8 960 aaKnown RBP11.73□□□□□ -0.53
CPNE8-204ENST00000546603 CDK2AP1O14519 115 aa11.72□□□□□ -0.53
CPNE8-204ENST00000546603 RASA1P20936 1047 aa11.72□□□□□ -0.53
CPNE8-204ENST00000546603 MTFR1Q15390 333 aa11.72□□□□□ -0.53
CPNE8-204ENST00000546603 C4orf17Q53FE4 359 aa11.72□□□□□ -0.53
CPNE8-204ENST00000546603 GMCL1Q96IK5 515 aa11.72□□□□□ -0.53
CPNE8-204ENST00000546603 GAS2L1Q99501 681 aaPredicted RBP11.72□□□□□ -0.53
CPNE8-204ENST00000546603 GMPRP36959 345 aa11.71□□□□□ -0.53
CPNE8-204ENST00000546603 PHKA2P46019 1235 aa11.71□□□□□ -0.53
CPNE8-204ENST00000546603 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
CPNE8-204ENST00000546603 RIPOR1Q6ZS17 1223 aa11.71□□□□□ -0.53
CPNE8-204ENST00000546603 SV2AQ7L0J3 742 aa11.71□□□□□ -0.53
CPNE8-204ENST00000546603 VWA5B2Q8N398 1253 aa11.71□□□□□ -0.53
CPNE8-204ENST00000546603 VRTNQ9H8Y1 702 aa11.71□□□□□ -0.53
CPNE8-204ENST00000546603 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.53
CPNE8-204ENST00000546603 CDC14CA4D256 554 aa11.7□□□□□ -0.54
CPNE8-204ENST00000546603 F11P03951 625 aa11.7□□□□□ -0.54
CPNE8-204ENST00000546603 KANK4Q5T7N3 995 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-204ENST00000546603 SIX5Q8N196 739 aa11.7□□□□□ -0.54
CPNE8-204ENST00000546603 NIFKQ9BYG3 293 aaKnown RBP11.7□□□□□ -0.54
CPNE8-204ENST00000546603 A0A1B0GTH6 734 aa11.69□□□□□ -0.54
CPNE8-204ENST00000546603 H7C1W4 665 aa11.69□□□□□ -0.54
CPNE8-204ENST00000546603 CFAP70Q5T0N1 1121 aa11.69□□□□□ -0.54
CPNE8-204ENST00000546603 TRIM22Q8IYM9 498 aa11.69□□□□□ -0.54
CPNE8-204ENST00000546603 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
CPNE8-204ENST00000546603 M0R2N6 131 aa11.68□□□□□ -0.54
CPNE8-204ENST00000546603 ERICH6Q7L0X2 663 aa11.68□□□□□ -0.54
CPNE8-204ENST00000546603 SCHIP1Q9P0W5 487 aaPredicted RBP11.68□□□□□ -0.54
CPNE8-204ENST00000546603 IQSEC3Q9UPP2 1182 aaPredicted RBP11.68□□□□□ -0.54
CPNE8-204ENST00000546603 CUEDC1Q9NWM3 386 aaPredicted RBP11.67□□□□□ -0.54
CPNE8-204ENST00000546603 GPR161Q8N6U8 529 aaKnown RBP11.66□□□□□ -0.54
CPNE8-204ENST00000546603 FAM196BA6NMK8 535 aa11.65□□□□□ -0.54
CPNE8-204ENST00000546603 PLA2G4AP47712 749 aa11.65□□□□□ -0.54
CPNE8-204ENST00000546603 EPHA4P54764 986 aa11.65□□□□□ -0.54
CPNE8-204ENST00000546603 DBN1Q16643 649 aa11.65□□□□□ -0.54
CPNE8-204ENST00000546603 FOXR1Q6PIV2 292 aa11.65□□□□□ -0.54
CPNE8-204ENST00000546603 TNS4Q8IZW8 715 aa11.65□□□□□ -0.54
CPNE8-204ENST00000546603 CABP1Q9NZU7 370 aa11.65□□□□□ -0.54
CPNE8-204ENST00000546603 DKK1O94907 266 aa11.64□□□□□ -0.55
CPNE8-204ENST00000546603 SEC13P55735 322 aa11.64□□□□□ -0.55
CPNE8-204ENST00000546603 INSM1Q01101 510 aaPredicted RBP11.64□□□□□ -0.55
CPNE8-204ENST00000546603 FOXK2Q01167 660 aa11.64□□□□□ -0.55
CPNE8-204ENST00000546603 PTK7Q13308 1070 aa11.64□□□□□ -0.55
CPNE8-204ENST00000546603 ZNF837Q96EG3 531 aaPredicted RBP11.64□□□□□ -0.55
CPNE8-204ENST00000546603 CCDC97Q96F63 343 aaPredicted RBP11.64□□□□□ -0.55
CPNE8-204ENST00000546603 SERPINA10Q9UK55 444 aa11.64□□□□□ -0.55
CPNE8-204ENST00000546603 CSB-PGBD3P0DP91 1061 aa11.63□□□□□ -0.55
CPNE8-204ENST00000546603 RFX1P22670 979 aa11.63□□□□□ -0.55
CPNE8-204ENST00000546603 MSX1P28360 303 aa11.63□□□□□ -0.55
CPNE8-204ENST00000546603 CRTC2Q53ET0 693 aaPredicted RBP11.63□□□□□ -0.55
CPNE8-204ENST00000546603 ZNF295-AS1Q8N0V1 137 aa11.63□□□□□ -0.55
CPNE8-204ENST00000546603 PGBD3Q8N328 593 aa11.63□□□□□ -0.55
CPNE8-204ENST00000546603 C1orf216Q8TAB5 229 aa11.63□□□□□ -0.55
CPNE8-204ENST00000546603 AIDAQ96BJ3 306 aa11.63□□□□□ -0.55
CPNE8-204ENST00000546603 GPAMQ9HCL2 828 aa11.63□□□□□ -0.55
CPNE8-204ENST00000546603 SFI1A8K8P3 1242 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L15C9J2P7 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L10C9JJH3 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L13C9JLJ4 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L12C9JPN9 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L11C9JVI0 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L21D6R901 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L18D6R9N7 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L22D6RA61 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L17D6RBQ6 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L19D6RCP7 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L20D6RJB6 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 USP17L24Q0WX57 530 aa11.62□□□□□ -0.55
CPNE8-204ENST00000546603 NBPF1Q3BBV0 1214 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms