RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 MSL1Q68DK7 614 aa16.11■□□□□ 0.17
UBC-214ENST00000546271 AK7Q96M32 723 aa16.11■□□□□ 0.17
UBC-214ENST00000546271 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
UBC-214ENST00000546271 SYT17Q9BSW7 474 aa16.11■□□□□ 0.17
UBC-214ENST00000546271 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
UBC-214ENST00000546271 ZNF831Q5JPB2 1677 aa16.11■□□□□ 0.17
UBC-214ENST00000546271 LOC102724428A0A0B4J2F2 783 aa16.1■□□□□ 0.17
UBC-214ENST00000546271 YY1P25490 414 aa16.1■□□□□ 0.17
UBC-214ENST00000546271 HMGB2P26583 209 aaKnown RBP16.1■□□□□ 0.17
UBC-214ENST00000546271 SIK1P57059 783 aa16.1■□□□□ 0.17
UBC-214ENST00000546271 CABP4P57796 275 aa16.1■□□□□ 0.17
UBC-214ENST00000546271 AKAP4Q5JQC9 854 aa16.1■□□□□ 0.17
UBC-214ENST00000546271 COL23A1Q86Y22 540 aaPredicted RBP16.1■□□□□ 0.17
UBC-214ENST00000546271 CHD4Q14839 1912 aa16.09■□□□□ 0.17
UBC-214ENST00000546271 PHF14O94880 888 aa16.09■□□□□ 0.17
UBC-214ENST00000546271 MAP3K5Q99683 1374 aa16.09■□□□□ 0.17
UBC-214ENST00000546271 MTHFSDQ2M296 383 aaKnown RBP16.08■□□□□ 0.16
UBC-214ENST00000546271 TJP1Q07157 1748 aa16.08■□□□□ 0.16
UBC-214ENST00000546271 C4AP0C0L4 1744 aa16.07■□□□□ 0.16
UBC-214ENST00000546271 ATP6V1AP38606 617 aa16.06■□□□□ 0.16
UBC-214ENST00000546271 ITPK1Q13572 414 aa16.06■□□□□ 0.16
UBC-214ENST00000546271 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
UBC-214ENST00000546271 NFATC2IPQ8NCF5 419 aa16.06■□□□□ 0.16
UBC-214ENST00000546271 LINC00116Q8NCU8 138 aa16.06■□□□□ 0.16
UBC-214ENST00000546271 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
UBC-214ENST00000546271 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
UBC-214ENST00000546271 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
UBC-214ENST00000546271 LGR6Q9HBX8 967 aa16.05■□□□□ 0.16
UBC-214ENST00000546271 RNMTO43148 476 aaKnown RBP16.04■□□□□ 0.16
UBC-214ENST00000546271 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
UBC-214ENST00000546271 SLC4A9Q96Q91 983 aa16.04■□□□□ 0.16
UBC-214ENST00000546271 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
UBC-214ENST00000546271 RSPH6AQ9H0K4 717 aa16.04■□□□□ 0.16
UBC-214ENST00000546271 CICQ96RK0 1608 aaPredicted RBP16.04■□□□□ 0.16
UBC-214ENST00000546271 GNPATO15228 680 aa16.03■□□□□ 0.16
UBC-214ENST00000546271 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
UBC-214ENST00000546271 AMIGO3Q86WK7 504 aa16.03■□□□□ 0.16
UBC-214ENST00000546271 SLC52A2Q9HAB3 445 aa16.03■□□□□ 0.16
UBC-214ENST00000546271 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.02■□□□□ 0.16
UBC-214ENST00000546271 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.16
UBC-214ENST00000546271 ZEB1P37275 1124 aaPredicted RBP16.02■□□□□ 0.16
UBC-214ENST00000546271 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.16
UBC-214ENST00000546271 NLGN2Q8NFZ4 835 aa16.02■□□□□ 0.16
UBC-214ENST00000546271 GAS2L2Q8NHY3 880 aa16.02■□□□□ 0.16
UBC-214ENST00000546271 MRC1P22897 1456 aa16.02■□□□□ 0.15
UBC-214ENST00000546271 ADAMTS7Q9UKP4 1686 aa16.02■□□□□ 0.15
UBC-214ENST00000546271 GPR162Q16538 588 aa16.01■□□□□ 0.15
UBC-214ENST00000546271 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
UBC-214ENST00000546271 PTCD1O75127 700 aaKnown RBP16■□□□□ 0.15
UBC-214ENST00000546271 SSFA2P28290 1259 aa16■□□□□ 0.15
UBC-214ENST00000546271 GNAT3A8MTJ3 354 aa15.99■□□□□ 0.15
UBC-214ENST00000546271 FCHSD2O94868 740 aa15.99■□□□□ 0.15
UBC-214ENST00000546271 RALBP1Q15311 655 aa15.99■□□□□ 0.15
UBC-214ENST00000546271 MYH14Q7Z406 1995 aaKnown RBP15.98■□□□□ 0.15
UBC-214ENST00000546271 UBR2Q8IWV8 1755 aa15.98■□□□□ 0.15
UBC-214ENST00000546271 IL17REQ8NFR9 667 aa15.98■□□□□ 0.15
UBC-214ENST00000546271 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
UBC-214ENST00000546271 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
UBC-214ENST00000546271 SLC39A6Q13433 755 aa15.97■□□□□ 0.15
UBC-214ENST00000546271 RC3H1Q5TC82 1133 aaKnown RBP15.97■□□□□ 0.15
UBC-214ENST00000546271 N4BP2Q86UW6 1770 aaPredicted RBP15.96■□□□□ 0.15
UBC-214ENST00000546271 RTCBQ9Y3I0 505 aaKnown RBP15.96■□□□□ 0.15
UBC-214ENST00000546271 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.14
UBC-214ENST00000546271 KIAA1551Q9HCM1 1747 aa15.95■□□□□ 0.14
UBC-214ENST00000546271 TEFQ10587 303 aa15.95■□□□□ 0.14
UBC-214ENST00000546271 KCPQ6ZWJ8 1503 aa15.94■□□□□ 0.14
UBC-214ENST00000546271 RPS6KA4O75676 772 aa15.94■□□□□ 0.14
UBC-214ENST00000546271 CEMIPQ8WUJ3 1361 aa15.94■□□□□ 0.14
UBC-214ENST00000546271 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
UBC-214ENST00000546271 TRAPPC3LQ5T215 181 aa15.93■□□□□ 0.14
UBC-214ENST00000546271 DNAJC10Q8IXB1 793 aa15.93■□□□□ 0.14
UBC-214ENST00000546271 CD2APQ9Y5K6 639 aa15.93■□□□□ 0.14
UBC-214ENST00000546271 MYBBP1AQ9BQG0 1328 aaKnown RBP15.93■□□□□ 0.14
UBC-214ENST00000546271 ADRA2BP18089 450 aa15.92■□□□□ 0.14
UBC-214ENST00000546271 ARHGEF1Q92888 912 aaKnown RBP15.92■□□□□ 0.14
UBC-214ENST00000546271 WWC3Q9ULE0 1092 aa15.92■□□□□ 0.14
UBC-214ENST00000546271 MMP10P09238 476 aa15.91■□□□□ 0.14
UBC-214ENST00000546271 YBX3P16989 372 aaKnown RBP eCLIP15.91■□□□□ 0.144e-14■□□□□ 10.8
UBC-214ENST00000546271 RFC4P35249 363 aa15.91■□□□□ 0.14
UBC-214ENST00000546271 INTS5Q6P9B9 1019 aaKnown RBP15.91■□□□□ 0.14
UBC-214ENST00000546271 TTC5Q8N0Z6 440 aa15.91■□□□□ 0.14
UBC-214ENST00000546271 VSIG10Q8N0Z9 540 aa15.91■□□□□ 0.14
UBC-214ENST00000546271 RTF1Q92541 710 aaKnown RBP15.91■□□□□ 0.14
UBC-214ENST00000546271 PLEKHF1Q96S99 279 aa15.91■□□□□ 0.14
UBC-214ENST00000546271 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
UBC-214ENST00000546271 NEFMP07197 916 aa15.9■□□□□ 0.14
UBC-214ENST00000546271 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
UBC-214ENST00000546271 ZNF790Q6PG37 636 aa15.9■□□□□ 0.14
UBC-214ENST00000546271 MCM10Q7L590 875 aa15.9■□□□□ 0.14
UBC-214ENST00000546271 ZNF784Q8NCA9 323 aaPredicted RBP15.89■□□□□ 0.13
UBC-214ENST00000546271 ZNF496Q96IT1 587 aaPredicted RBP15.89■□□□□ 0.13
UBC-214ENST00000546271 PNNQ9H307 717 aaKnown RBP15.89■□□□□ 0.13
UBC-214ENST00000546271 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
UBC-214ENST00000546271 BRCA1P38398 1863 aaKnown RBP15.88■□□□□ 0.13
UBC-214ENST00000546271 BTBD11A6QL63 1104 aa15.88■□□□□ 0.13
UBC-214ENST00000546271 DCTN1Q14203 1278 aa15.88■□□□□ 0.13
UBC-214ENST00000546271 PRKRIP1Q9H875 184 aaPredicted RBP15.88■□□□□ 0.13
UBC-214ENST00000546271 HEG1Q9ULI3 1381 aa15.87■□□□□ 0.13
UBC-214ENST00000546271 C10orf71Q711Q0 1435 aa15.87■□□□□ 0.13
UBC-214ENST00000546271 SCN7AQ01118 1682 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms