RNA–Protein interactions for RNA: ENST00000546260.5

SOD2-216, Transcript of superoxide dismutase 2, humanhuman

TSL 5

Gene SOD2, Length 4,302 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-216ENST00000546260 NCOA3Q9Y6Q9 1424 aa12.17□□□□□ -0.46
SOD2-216ENST00000546260 CT47B1P0C2W7 299 aaPredicted RBP12.17□□□□□ -0.46
SOD2-216ENST00000546260 ZNF75DP51815 510 aa12.17□□□□□ -0.46
SOD2-216ENST00000546260 SDF4Q9BRK5 362 aa12.17□□□□□ -0.46
SOD2-216ENST00000546260 DHX8Q14562 1220 aaKnown RBP12.17□□□□□ -0.46
SOD2-216ENST00000546260 TSHZ3Q63HK5 1081 aa12.17□□□□□ -0.46
SOD2-216ENST00000546260 DACT1Q9NYF0 836 aa12.17□□□□□ -0.46
SOD2-216ENST00000546260 BCORL1Q5H9F3 1711 aa12.17□□□□□ -0.46
SOD2-216ENST00000546260 INSRP06213 1382 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 PLEKHD1A6NEE1 506 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 GBP6Q6ZN66 633 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 NOC3LQ8WTT2 800 aaKnown RBP12.16□□□□□ -0.46
SOD2-216ENST00000546260 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 USP16Q9Y5T5 823 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 KIAA0754O94854 1291 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
SOD2-216ENST00000546260 SF3A1Q15459 793 aaKnown RBP12.16□□□□□ -0.46
SOD2-216ENST00000546260 TESK2Q96S53 571 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 ERLIN1O75477 346 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 EVCP57679 992 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 ST5P78524 1137 aa12.16□□□□□ -0.46
SOD2-216ENST00000546260 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
SOD2-216ENST00000546260 CACTINQ8WUQ7 758 aaKnown RBP12.16□□□□□ -0.46
SOD2-216ENST00000546260 GUCY2CP25092 1073 aa12.15□□□□□ -0.46
SOD2-216ENST00000546260 ISM2Q6H9L7 571 aa12.15□□□□□ -0.46
SOD2-216ENST00000546260 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
SOD2-216ENST00000546260 JAKMIP3Q5VZ66 844 aa12.15□□□□□ -0.46
SOD2-216ENST00000546260 TMC6Q7Z403 805 aa12.15□□□□□ -0.46
SOD2-216ENST00000546260 CARD6Q9BX69 1037 aa12.15□□□□□ -0.46
SOD2-216ENST00000546260 TULP2O00295 520 aa12.15□□□□□ -0.47
SOD2-216ENST00000546260 CCP110O43303 1012 aa12.15□□□□□ -0.47
SOD2-216ENST00000546260 KINO60870 393 aaKnown RBP12.15□□□□□ -0.47
SOD2-216ENST00000546260 NAT10Q9H0A0 1025 aaKnown RBP12.15□□□□□ -0.47
SOD2-216ENST00000546260 SUPT6HQ7KZ85 1726 aaKnown RBP12.15□□□□□ -0.47
SOD2-216ENST00000546260 EHBP1L1Q8N3D4 1523 aa12.14□□□□□ -0.47
SOD2-216ENST00000546260 PLEKHM2Q8IWE5 1019 aa12.14□□□□□ -0.47
SOD2-216ENST00000546260 CXorf56Q9H5V9 222 aa12.14□□□□□ -0.47
SOD2-216ENST00000546260 ABCA5Q8WWZ7 1642 aa12.14□□□□□ -0.47
SOD2-216ENST00000546260 MAP4K4O95819 1239 aaPredicted RBP12.14□□□□□ -0.47
SOD2-216ENST00000546260 NF2P35240 595 aa12.14□□□□□ -0.47
SOD2-216ENST00000546260 OTUD7AQ8TE49 926 aaPredicted RBP12.14□□□□□ -0.47
SOD2-216ENST00000546260 NEBLO76041 1014 aa12.14□□□□□ -0.47
SOD2-216ENST00000546260 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
SOD2-216ENST00000546260 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 F13A1P00488 732 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 CYP2E1P05181 493 aaPredicted RBP12.13□□□□□ -0.47
SOD2-216ENST00000546260 SRLQ86TD4 932 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 PLEKHA4Q9H4M7 779 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 RBM6P78332 1123 aaKnown RBP12.13□□□□□ -0.47
SOD2-216ENST00000546260 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
SOD2-216ENST00000546260 POLKQ9UBT6 870 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 SUFUQ9UMX1 484 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 CDR1P51861 262 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 TICAM2Q86XR7 235 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 KCNG1Q9UIX4 513 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.13□□□□□ -0.47
SOD2-216ENST00000546260 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
SOD2-216ENST00000546260 GSPT1P15170 499 aaKnown RBP12.13□□□□□ -0.47
SOD2-216ENST00000546260 ACTN2P35609 894 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 CEP57L1Q8IYX8 460 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 FBXO18Q8NFZ0 1043 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 RABEP2Q9H5N1 569 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 RAI14Q9P0K7 980 aa12.13□□□□□ -0.47
SOD2-216ENST00000546260 LCMT1Q9UIC8 334 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 GJB2P29033 226 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 ERCC4Q92889 916 aaPredicted RBP12.12□□□□□ -0.47
SOD2-216ENST00000546260 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
SOD2-216ENST00000546260 LIG3P49916 1009 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 GSDMDP57764 484 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 GNG11P61952 73 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 ARID5BQ14865 1188 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 FAM107BQ9H098 131 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 TRAK1Q9UPV9 953 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
SOD2-216ENST00000546260 SYT1P21579 422 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 MAGEA9P43362 315 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 STK3Q13188 491 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 MCTP2Q6DN12 878 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 DDX11Q96FC9 970 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
SOD2-216ENST00000546260 EFCAB5A4FU69 1503 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 TMPOP42166 694 aaKnown RBP12.11□□□□□ -0.47
SOD2-216ENST00000546260 SMARCC1Q92922 1105 aaPredicted RBP12.11□□□□□ -0.47
SOD2-216ENST00000546260 SLC52A1Q9NWF4 448 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 AK9Q5TCS8 1911 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 ABCC5O15440 1437 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 FAM173BQ6P4H8 233 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 DDX19AQ9NUU7 478 aaKnown RBP12.11□□□□□ -0.47
SOD2-216ENST00000546260 CADPSQ9ULU8 1353 aa12.11□□□□□ -0.47
SOD2-216ENST00000546260 EIF3CLB5ME19 914 aaKnown RBP12.1□□□□□ -0.47
SOD2-216ENST00000546260 INTS4Q96HW7 963 aaKnown RBP12.1□□□□□ -0.47
SOD2-216ENST00000546260 EIF3CQ99613 913 aaKnown RBP12.1□□□□□ -0.47
SOD2-216ENST00000546260 CAMSAP2Q08AD1 1489 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 ERLIN2O94905 339 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 SERPINC1P01008 464 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 LIG1P18858 919 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 BIRC2Q13490 618 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 CFAP43Q8NDM7 1665 aa12.1□□□□□ -0.47
SOD2-216ENST00000546260 KDM6BO15054 1643 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms