RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
COPS7A-221ENST00000546229 IFNL2Q8IZJ0 200 aa17.39■□□□□ 0.37
COPS7A-221ENST00000546229 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
COPS7A-221ENST00000546229 BRCA1P38398 1863 aaKnown RBP17.39■□□□□ 0.37
COPS7A-221ENST00000546229 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
COPS7A-221ENST00000546229 TMOD3Q9NYL9 352 aa17.38■□□□□ 0.37
COPS7A-221ENST00000546229 PXDNLA1KZ92 1463 aa17.37■□□□□ 0.37
COPS7A-221ENST00000546229 GRIN3BO60391 1043 aa17.37■□□□□ 0.37
COPS7A-221ENST00000546229 PHF14O94880 888 aa17.37■□□□□ 0.37
COPS7A-221ENST00000546229 HSPA5P11021 654 aaKnown RBP17.37■□□□□ 0.37
COPS7A-221ENST00000546229 HMGB2P26583 209 aaKnown RBP17.37■□□□□ 0.37
COPS7A-221ENST00000546229 SCN11AQ9UI33 1791 aa17.36■□□□□ 0.37
COPS7A-221ENST00000546229 C10orf71Q711Q0 1435 aa17.36■□□□□ 0.37
COPS7A-221ENST00000546229 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
COPS7A-221ENST00000546229 PANK3Q9H999 370 aa17.35■□□□□ 0.37
COPS7A-221ENST00000546229 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
COPS7A-221ENST00000546229 GNPATO15228 680 aa17.34■□□□□ 0.37
COPS7A-221ENST00000546229 GIGYF1O75420 1035 aaPredicted RBP17.34■□□□□ 0.37
COPS7A-221ENST00000546229 MRC1P22897 1456 aa17.34■□□□□ 0.37
COPS7A-221ENST00000546229 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.36
COPS7A-221ENST00000546229 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
COPS7A-221ENST00000546229 ATP6V1AP38606 617 aa17.33■□□□□ 0.36
COPS7A-221ENST00000546229 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
COPS7A-221ENST00000546229 AEBP1Q8IUX7 1158 aa17.33■□□□□ 0.36
COPS7A-221ENST00000546229 CNTNAP4Q9C0A0 1308 aa17.32■□□□□ 0.36
COPS7A-221ENST00000546229 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
COPS7A-221ENST00000546229 DCAF5Q96JK2 942 aa17.31■□□□□ 0.36
COPS7A-221ENST00000546229 MMP10P09238 476 aa17.29■□□□□ 0.36
COPS7A-221ENST00000546229 RC3H1Q5TC82 1133 aaKnown RBP17.29■□□□□ 0.36
COPS7A-221ENST00000546229 POLR3GLQ9BT43 218 aa17.29■□□□□ 0.36
COPS7A-221ENST00000546229 IL13P35225 146 aa17.28■□□□□ 0.36
COPS7A-221ENST00000546229 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
COPS7A-221ENST00000546229 ZNF530Q6P9A1 599 aaPredicted RBP17.28■□□□□ 0.36
COPS7A-221ENST00000546229 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
COPS7A-221ENST00000546229 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
COPS7A-221ENST00000546229 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
COPS7A-221ENST00000546229 KCPQ6ZWJ8 1503 aa17.27■□□□□ 0.36
COPS7A-221ENST00000546229 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
COPS7A-221ENST00000546229 GYS1P13807 737 aa17.27■□□□□ 0.36
COPS7A-221ENST00000546229 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
COPS7A-221ENST00000546229 ADRA2BP18089 450 aa17.26■□□□□ 0.35
COPS7A-221ENST00000546229 AMOTQ4VCS5 1084 aa17.26■□□□□ 0.35
COPS7A-221ENST00000546229 PLEKHO1Q53GL0 409 aaPredicted RBP17.26■□□□□ 0.35
COPS7A-221ENST00000546229 ARHGEF1Q92888 912 aaKnown RBP17.26■□□□□ 0.35
COPS7A-221ENST00000546229 WWC3Q9ULE0 1092 aa17.26■□□□□ 0.35
COPS7A-221ENST00000546229 RPS6KA4O75676 772 aa17.25■□□□□ 0.35
COPS7A-221ENST00000546229 RTCBQ9Y3I0 505 aaKnown RBP17.25■□□□□ 0.35
COPS7A-221ENST00000546229 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
COPS7A-221ENST00000546229 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
COPS7A-221ENST00000546229 MORC1Q86VD1 984 aa17.23■□□□□ 0.35
COPS7A-221ENST00000546229 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
COPS7A-221ENST00000546229 CABP4P57796 275 aa17.22■□□□□ 0.35
COPS7A-221ENST00000546229 TRAPPC3LQ5T215 181 aa17.22■□□□□ 0.35
COPS7A-221ENST00000546229 SULT6B1Q6IMI4 303 aa17.22■□□□□ 0.35
COPS7A-221ENST00000546229 NLGN1Q8N2Q7 840 aa17.22■□□□□ 0.35
COPS7A-221ENST00000546229 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
COPS7A-221ENST00000546229 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
COPS7A-221ENST00000546229 KIF3CO14782 793 aa17.21■□□□□ 0.35
COPS7A-221ENST00000546229 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.35
COPS7A-221ENST00000546229 KCNA3P22001 575 aa17.21■□□□□ 0.35
COPS7A-221ENST00000546229 CRKLP46109 303 aaKnown RBP17.21■□□□□ 0.35
COPS7A-221ENST00000546229 TGFB2P61812 414 aa17.21■□□□□ 0.35
COPS7A-221ENST00000546229 AFDNP55196 1824 aaKnown RBP17.2■□□□□ 0.34
COPS7A-221ENST00000546229 MTHFSP49914 203 aa17.2■□□□□ 0.34
COPS7A-221ENST00000546229 DDR1Q08345 913 aa17.2■□□□□ 0.34
COPS7A-221ENST00000546229 INTS5Q6P9B9 1019 aaKnown RBP17.2■□□□□ 0.34
COPS7A-221ENST00000546229 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
COPS7A-221ENST00000546229 GPBP1L1Q9HC44 474 aaPredicted RBP17.2■□□□□ 0.34
COPS7A-221ENST00000546229 DLEC1Q9Y238 1755 aa17.2■□□□□ 0.34
COPS7A-221ENST00000546229 PTCD1O75127 700 aaKnown RBP17.19■□□□□ 0.34
COPS7A-221ENST00000546229 SRP68Q9UHB9 627 aaKnown RBP17.19■□□□□ 0.34
COPS7A-221ENST00000546229 A0A0G2JLW4 131 aa17.18■□□□□ 0.34
COPS7A-221ENST00000546229 DPEP1P16444 411 aa17.18■□□□□ 0.34
COPS7A-221ENST00000546229 FKBP8Q14318 412 aa17.18■□□□□ 0.34
COPS7A-221ENST00000546229 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
COPS7A-221ENST00000546229 KNSTRNQ9Y448 316 aa17.18■□□□□ 0.34
COPS7A-221ENST00000546229 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
COPS7A-221ENST00000546229 ZNF526Q8TF50 670 aaPredicted RBP17.17■□□□□ 0.34
COPS7A-221ENST00000546229 SLC52A2Q9HAB3 445 aa17.17■□□□□ 0.34
COPS7A-221ENST00000546229 SOS1Q07889 1333 aaPredicted RBP17.17■□□□□ 0.34
COPS7A-221ENST00000546229 RFC4P35249 363 aa17.16■□□□□ 0.34
COPS7A-221ENST00000546229 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
COPS7A-221ENST00000546229 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
COPS7A-221ENST00000546229 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
COPS7A-221ENST00000546229 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
COPS7A-221ENST00000546229 HSPA6P17066 643 aa17.15■□□□□ 0.34
COPS7A-221ENST00000546229 SBF1O95248 1867 aa17.15■□□□□ 0.34
COPS7A-221ENST00000546229 POLRMTO00411 1230 aaKnown RBP17.14■□□□□ 0.33
COPS7A-221ENST00000546229 RNMTO43148 476 aaKnown RBP17.14■□□□□ 0.33
COPS7A-221ENST00000546229 DNAJC10Q8IXB1 793 aa17.14■□□□□ 0.33
COPS7A-221ENST00000546229 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
COPS7A-221ENST00000546229 CYP19A1P11511 503 aaPredicted RBP17.13■□□□□ 0.33
COPS7A-221ENST00000546229 TM4SF1P30408 202 aa17.13■□□□□ 0.33
COPS7A-221ENST00000546229 PARP3Q9Y6F1 533 aa17.13■□□□□ 0.33
COPS7A-221ENST00000546229 HMOX1P09601 288 aa17.12■□□□□ 0.33
COPS7A-221ENST00000546229 MTHFSDQ2M296 383 aaKnown RBP17.12■□□□□ 0.33
COPS7A-221ENST00000546229 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
COPS7A-221ENST00000546229 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
COPS7A-221ENST00000546229 COL15A1P39059 1388 aa17.12■□□□□ 0.33
COPS7A-221ENST00000546229 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms