RNA–Protein interactions for RNA: ENST00000546181.2

NECAP1-209, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 1,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-209ENST00000546181 YBX3P16989 372 aaKnown RBP eCLIP15.92■□□□□ 0.14
NECAP1-209ENST00000546181 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
NECAP1-209ENST00000546181 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
NECAP1-209ENST00000546181 POTEHQ6S545 545 aa15.91■□□□□ 0.14
NECAP1-209ENST00000546181 LINC00116Q8NCU8 138 aa15.91■□□□□ 0.14
NECAP1-209ENST00000546181 PANK3Q9H999 370 aa15.91■□□□□ 0.14
NECAP1-209ENST00000546181 ASAP1Q9ULH1 1129 aa15.91■□□□□ 0.14
NECAP1-209ENST00000546181 CLSPNQ9HAW4 1339 aa15.91■□□□□ 0.14
NECAP1-209ENST00000546181 PHKG2P15735 406 aa15.9■□□□□ 0.14
NECAP1-209ENST00000546181 AK7Q96M32 723 aa15.9■□□□□ 0.14
NECAP1-209ENST00000546181 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
NECAP1-209ENST00000546181 ITPK1Q13572 414 aa15.89■□□□□ 0.13
NECAP1-209ENST00000546181 SMARCC1Q92922 1105 aaPredicted RBP15.89■□□□□ 0.13
NECAP1-209ENST00000546181 TMOD3Q9NYL9 352 aa15.89■□□□□ 0.13
NECAP1-209ENST00000546181 WWC3Q9ULE0 1092 aa15.89■□□□□ 0.13
NECAP1-209ENST00000546181 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
NECAP1-209ENST00000546181 LOC102724428A0A0B4J2F2 783 aa15.88■□□□□ 0.13
NECAP1-209ENST00000546181 SIK1P57059 783 aa15.88■□□□□ 0.13
NECAP1-209ENST00000546181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.87■□□□□ 0.13
NECAP1-209ENST00000546181 IFNL2Q8IZJ0 200 aa15.87■□□□□ 0.13
NECAP1-209ENST00000546181 ATG3Q9NT62 314 aa15.87■□□□□ 0.13
NECAP1-209ENST00000546181 AEBP1Q8IUX7 1158 aa15.86■□□□□ 0.13
NECAP1-209ENST00000546181 CCER1Q8TC90 406 aaPredicted RBP15.86■□□□□ 0.13
NECAP1-209ENST00000546181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.86■□□□□ 0.13
NECAP1-209ENST00000546181 IGSF1Q8N6C5 1336 aa15.86■□□□□ 0.13
NECAP1-209ENST00000546181 ATP6V1AP38606 617 aa15.85■□□□□ 0.13
NECAP1-209ENST00000546181 FLAD1Q8NFF5 587 aa15.85■□□□□ 0.13
NECAP1-209ENST00000546181 GNPATO15228 680 aa15.84■□□□□ 0.13
NECAP1-209ENST00000546181 SLC4A9Q96Q91 983 aa15.84■□□□□ 0.13
NECAP1-209ENST00000546181 KDM6AO15550 1401 aaPredicted RBP15.84■□□□□ 0.13
NECAP1-209ENST00000546181 KDRP35968 1356 aa15.83■□□□□ 0.12
NECAP1-209ENST00000546181 COL5A3P25940 1745 aaPredicted RBP15.82■□□□□ 0.12
NECAP1-209ENST00000546181 SSFA2P28290 1259 aa15.82■□□□□ 0.12
NECAP1-209ENST00000546181 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
NECAP1-209ENST00000546181 CD2APQ9Y5K6 639 aa15.82■□□□□ 0.12
NECAP1-209ENST00000546181 C1QTNF8P60827 252 aa15.81■□□□□ 0.12
NECAP1-209ENST00000546181 ZNF530Q6P9A1 599 aaPredicted RBP15.81■□□□□ 0.12
NECAP1-209ENST00000546181 SENP3-EIF4A1A0A087X0R7 540 aa15.8■□□□□ 0.12
NECAP1-209ENST00000546181 GRIN3BO60391 1043 aa15.8■□□□□ 0.12
NECAP1-209ENST00000546181 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
NECAP1-209ENST00000546181 PLEKHO1Q53GL0 409 aaPredicted RBP15.79■□□□□ 0.12
NECAP1-209ENST00000546181 N4BP2Q86UW6 1770 aaPredicted RBP15.78■□□□□ 0.12
NECAP1-209ENST00000546181 C4AP0C0L4 1744 aa15.78■□□□□ 0.12
NECAP1-209ENST00000546181 KIAA1551Q9HCM1 1747 aa15.78■□□□□ 0.12
NECAP1-209ENST00000546181 ATP10DQ9P241 1426 aa15.77■□□□□ 0.12
NECAP1-209ENST00000546181 ZNF831Q5JPB2 1677 aa15.77■□□□□ 0.12
NECAP1-209ENST00000546181 CICQ96RK0 1608 aaPredicted RBP15.77■□□□□ 0.12
NECAP1-209ENST00000546181 ERVV-2B6SEH9 535 aa15.77■□□□□ 0.12
NECAP1-209ENST00000546181 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
NECAP1-209ENST00000546181 MMP10P09238 476 aa15.77■□□□□ 0.12
NECAP1-209ENST00000546181 SULT6B1Q6IMI4 303 aa15.77■□□□□ 0.12
NECAP1-209ENST00000546181 DCAF5Q96JK2 942 aa15.77■□□□□ 0.12
NECAP1-209ENST00000546181 KNSTRNQ9Y448 316 aa15.77■□□□□ 0.12
NECAP1-209ENST00000546181 KIF7Q2M1P5 1343 aa15.76■□□□□ 0.11
NECAP1-209ENST00000546181 PTCD1O75127 700 aaKnown RBP15.76■□□□□ 0.11
NECAP1-209ENST00000546181 HMGB2P26583 209 aaKnown RBP15.76■□□□□ 0.11
NECAP1-209ENST00000546181 CABP4P57796 275 aa15.76■□□□□ 0.11
NECAP1-209ENST00000546181 SCN11AQ9UI33 1791 aa15.76■□□□□ 0.11
NECAP1-209ENST00000546181 TJP1Q07157 1748 aa15.76■□□□□ 0.11
NECAP1-209ENST00000546181 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
NECAP1-209ENST00000546181 IL13P35225 146 aa15.75■□□□□ 0.11
NECAP1-209ENST00000546181 MTHFSP49914 203 aa15.75■□□□□ 0.11
NECAP1-209ENST00000546181 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
NECAP1-209ENST00000546181 ZNF526Q8TF50 670 aaPredicted RBP15.75■□□□□ 0.11
NECAP1-209ENST00000546181 RTCBQ9Y3I0 505 aaKnown RBP15.75■□□□□ 0.11
NECAP1-209ENST00000546181 VIRMAQ69YN4 1812 aaKnown RBP15.75■□□□□ 0.11
NECAP1-209ENST00000546181 KIF13BQ9NQT8 1826 aa15.75■□□□□ 0.11
NECAP1-209ENST00000546181 PXDNLA1KZ92 1463 aa15.74■□□□□ 0.11
NECAP1-209ENST00000546181 HSP90AB1P08238 724 aaKnown RBP15.74■□□□□ 0.11
NECAP1-209ENST00000546181 AMOTQ4VCS5 1084 aa15.74■□□□□ 0.11
NECAP1-209ENST00000546181 C1orf141Q5JVX7 400 aa15.74■□□□□ 0.11
NECAP1-209ENST00000546181 TRAPPC3LQ5T215 181 aa15.74■□□□□ 0.11
NECAP1-209ENST00000546181 NFATC2IPQ8NCF5 419 aa15.74■□□□□ 0.11
NECAP1-209ENST00000546181 ARHGEF1Q92888 912 aaKnown RBP15.74■□□□□ 0.11
NECAP1-209ENST00000546181 CNGB1Q14028 1251 aaPredicted RBP15.73■□□□□ 0.11
NECAP1-209ENST00000546181 ADCY9O60503 1353 aa15.73■□□□□ 0.11
NECAP1-209ENST00000546181 CNTNAP4Q9C0A0 1308 aa15.72■□□□□ 0.11
NECAP1-209ENST00000546181 HMOX1P09601 288 aa15.72■□□□□ 0.11
NECAP1-209ENST00000546181 GYS1P13807 737 aa15.72■□□□□ 0.11
NECAP1-209ENST00000546181 A0A0G2JLW4 131 aa15.71■□□□□ 0.11
NECAP1-209ENST00000546181 RPS6KA4O75676 772 aa15.71■□□□□ 0.11
NECAP1-209ENST00000546181 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
NECAP1-209ENST00000546181 LGR6Q9HBX8 967 aa15.71■□□□□ 0.11
NECAP1-209ENST00000546181 SRP68Q9UHB9 627 aaKnown RBP15.71■□□□□ 0.11
NECAP1-209ENST00000546181 C10orf71Q711Q0 1435 aa15.7■□□□□ 0.1
NECAP1-209ENST00000546181 CRKLP46109 303 aaKnown RBP15.7■□□□□ 0.1
NECAP1-209ENST00000546181 RC3H1Q5TC82 1133 aaKnown RBP15.7■□□□□ 0.1
NECAP1-209ENST00000546181 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
NECAP1-209ENST00000546181 RFC4P35249 363 aa15.69■□□□□ 0.1
NECAP1-209ENST00000546181 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
NECAP1-209ENST00000546181 SLC39A6Q13433 755 aa15.68■□□□□ 0.1
NECAP1-209ENST00000546181 NLGN1Q8N2Q7 840 aa15.68■□□□□ 0.1
NECAP1-209ENST00000546181 GPBP1L1Q9HC44 474 aaPredicted RBP15.68■□□□□ 0.1
NECAP1-209ENST00000546181 CEP350Q5VT06 3117 aa15.67■□□□□ 0.1
NECAP1-209ENST00000546181 PER1O15534 1290 aaPredicted RBP15.67■□□□□ 0.1
NECAP1-209ENST00000546181 DPEP1P16444 411 aa15.67■□□□□ 0.1
NECAP1-209ENST00000546181 FKBP8Q14318 412 aa15.67■□□□□ 0.1
NECAP1-209ENST00000546181 DNAJC10Q8IXB1 793 aa15.67■□□□□ 0.1
NECAP1-209ENST00000546181 BCS1LQ9Y276 419 aa15.67■□□□□ 0.1
NECAP1-209ENST00000546181 MRC1P22897 1456 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms