RNA–Protein interactions for RNA: ENST00000546033.1

PTP4A1P2-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 2, humanhuman

BASIC

Gene PTP4A1P2, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P2-201ENST00000546033 U2AF1Q01081 240 aaKnown RBP eCLIP20.52■□□□□ 0.88
PTP4A1P2-201ENST00000546033 RALBP1Q15311 655 aa20.52■□□□□ 0.88
PTP4A1P2-201ENST00000546033 FLAD1Q8NFF5 587 aa20.52■□□□□ 0.88
PTP4A1P2-201ENST00000546033 AK7Q96M32 723 aa20.52■□□□□ 0.88
PTP4A1P2-201ENST00000546033 TUBGCP6Q96RT7 1819 aa20.52■□□□□ 0.88
PTP4A1P2-201ENST00000546033 PNPLA7Q6ZV29 1317 aa20.52■□□□□ 0.87
PTP4A1P2-201ENST00000546033 MSH5O43196 834 aa20.51■□□□□ 0.87
PTP4A1P2-201ENST00000546033 NFATC2IPQ8NCF5 419 aa20.51■□□□□ 0.87
PTP4A1P2-201ENST00000546033 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
PTP4A1P2-201ENST00000546033 C4BP0C0L5 1744 aa20.5■□□□□ 0.87
PTP4A1P2-201ENST00000546033 RNMTO43148 476 aaKnown RBP20.49■□□□□ 0.87
PTP4A1P2-201ENST00000546033 FCHSD2O94868 740 aa20.48■□□□□ 0.87
PTP4A1P2-201ENST00000546033 NEFMP07197 916 aa20.48■□□□□ 0.87
PTP4A1P2-201ENST00000546033 POLD1P28340 1107 aa20.48■□□□□ 0.87
PTP4A1P2-201ENST00000546033 PRKAR2BP31323 418 aa20.48■□□□□ 0.87
PTP4A1P2-201ENST00000546033 RSPH6AQ9H0K4 717 aa20.48■□□□□ 0.87
PTP4A1P2-201ENST00000546033 SLC52A2Q9HAB3 445 aa20.48■□□□□ 0.87
PTP4A1P2-201ENST00000546033 GNAT3A8MTJ3 354 aa20.47■□□□□ 0.87
PTP4A1P2-201ENST00000546033 PTGER2P43116 358 aa20.47■□□□□ 0.87
PTP4A1P2-201ENST00000546033 LGR6Q9HBX8 967 aa20.47■□□□□ 0.87
PTP4A1P2-201ENST00000546033 MAP3K5Q99683 1374 aa20.46■□□□□ 0.87
PTP4A1P2-201ENST00000546033 ZNF831Q5JPB2 1677 aa20.45■□□□□ 0.86
PTP4A1P2-201ENST00000546033 COL23A1Q86Y22 540 aaPredicted RBP20.45■□□□□ 0.86
PTP4A1P2-201ENST00000546033 LINC00116Q8NCU8 138 aa20.45■□□□□ 0.86
PTP4A1P2-201ENST00000546033 UBR3Q6ZT12 1888 aa20.44■□□□□ 0.86
PTP4A1P2-201ENST00000546033 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
PTP4A1P2-201ENST00000546033 ITPK1Q13572 414 aa20.44■□□□□ 0.86
PTP4A1P2-201ENST00000546033 MRC1P22897 1456 aa20.43■□□□□ 0.86
PTP4A1P2-201ENST00000546033 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
PTP4A1P2-201ENST00000546033 SSFA2P28290 1259 aa20.43■□□□□ 0.86
PTP4A1P2-201ENST00000546033 TEFQ10587 303 aa20.43■□□□□ 0.86
PTP4A1P2-201ENST00000546033 ARXQ96QS3 562 aa20.43■□□□□ 0.86
PTP4A1P2-201ENST00000546033 PNNQ9H307 717 aaKnown RBP20.43■□□□□ 0.86
PTP4A1P2-201ENST00000546033 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
PTP4A1P2-201ENST00000546033 GNPATO15228 680 aa20.42■□□□□ 0.86
PTP4A1P2-201ENST00000546033 PHF14O94880 888 aa20.42■□□□□ 0.86
PTP4A1P2-201ENST00000546033 PHACTR3Q96KR7 559 aa20.42■□□□□ 0.86
PTP4A1P2-201ENST00000546033 SGIP1Q9BQI5 828 aa20.42■□□□□ 0.86
PTP4A1P2-201ENST00000546033 RTF1Q92541 710 aaKnown RBP20.41■□□□□ 0.86
PTP4A1P2-201ENST00000546033 MYBBP1AQ9BQG0 1328 aaKnown RBP20.41■□□□□ 0.86
PTP4A1P2-201ENST00000546033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.4■□□□□ 0.86
PTP4A1P2-201ENST00000546033 RC3H1Q5TC82 1133 aaKnown RBP20.4■□□□□ 0.86
PTP4A1P2-201ENST00000546033 SLC4A9Q96Q91 983 aa20.4■□□□□ 0.86
PTP4A1P2-201ENST00000546033 RTCBQ9Y3I0 505 aaKnown RBP20.4■□□□□ 0.86
PTP4A1P2-201ENST00000546033 COL5A3P25940 1745 aaPredicted RBP20.39■□□□□ 0.86
PTP4A1P2-201ENST00000546033 TTC5Q8N0Z6 440 aa20.39■□□□□ 0.85
PTP4A1P2-201ENST00000546033 COL24A1Q17RW2 1714 aa20.39■□□□□ 0.85
PTP4A1P2-201ENST00000546033 CNTNAP4Q9C0A0 1308 aa20.38■□□□□ 0.85
PTP4A1P2-201ENST00000546033 SLC39A6Q13433 755 aa20.38■□□□□ 0.85
PTP4A1P2-201ENST00000546033 IL17REQ8NFR9 667 aa20.38■□□□□ 0.85
PTP4A1P2-201ENST00000546033 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
PTP4A1P2-201ENST00000546033 TRAPPC3LQ5T215 181 aa20.37■□□□□ 0.85
PTP4A1P2-201ENST00000546033 MAPK8IP3Q9UPT6 1336 aa20.36■□□□□ 0.85
PTP4A1P2-201ENST00000546033 ADRA2BP18089 450 aa20.36■□□□□ 0.85
PTP4A1P2-201ENST00000546033 MSL1Q68DK7 614 aa20.36■□□□□ 0.85
PTP4A1P2-201ENST00000546033 HTATSF1O43719 755 aaKnown RBP20.35■□□□□ 0.85
PTP4A1P2-201ENST00000546033 RPS6KA4O75676 772 aa20.35■□□□□ 0.85
PTP4A1P2-201ENST00000546033 KLHL34Q8N239 644 aa20.35■□□□□ 0.85
PTP4A1P2-201ENST00000546033 SYT17Q9BSW7 474 aa20.35■□□□□ 0.85
PTP4A1P2-201ENST00000546033 MYH14Q7Z406 1995 aaKnown RBP20.35■□□□□ 0.85
PTP4A1P2-201ENST00000546033 CICQ96RK0 1608 aaPredicted RBP20.35■□□□□ 0.85
PTP4A1P2-201ENST00000546033 CEMIPQ8WUJ3 1361 aa20.34■□□□□ 0.85
PTP4A1P2-201ENST00000546033 CRKLP46109 303 aaKnown RBP20.34■□□□□ 0.85
PTP4A1P2-201ENST00000546033 AMIGO3Q86WK7 504 aa20.34■□□□□ 0.85
PTP4A1P2-201ENST00000546033 VSIG10Q8N0Z9 540 aa20.34■□□□□ 0.85
PTP4A1P2-201ENST00000546033 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
PTP4A1P2-201ENST00000546033 TJP1Q07157 1748 aa20.33■□□□□ 0.85
PTP4A1P2-201ENST00000546033 PRKRIP1Q9H875 184 aaPredicted RBP20.33■□□□□ 0.85
PTP4A1P2-201ENST00000546033 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
PTP4A1P2-201ENST00000546033 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
PTP4A1P2-201ENST00000546033 RFC4P35249 363 aa20.32■□□□□ 0.84
PTP4A1P2-201ENST00000546033 ZNF790Q6PG37 636 aa20.32■□□□□ 0.84
PTP4A1P2-201ENST00000546033 SMIM5Q71RC9 77 aa20.32■□□□□ 0.84
PTP4A1P2-201ENST00000546033 DNAJC10Q8IXB1 793 aa20.32■□□□□ 0.84
PTP4A1P2-201ENST00000546033 UBR2Q8IWV8 1755 aa20.31■□□□□ 0.84
PTP4A1P2-201ENST00000546033 MCM10Q7L590 875 aa20.31■□□□□ 0.84
PTP4A1P2-201ENST00000546033 KCPQ6ZWJ8 1503 aa20.31■□□□□ 0.84
PTP4A1P2-201ENST00000546033 DLG5Q8TDM6 1919 aa20.31■□□□□ 0.84
PTP4A1P2-201ENST00000546033 WDR43Q15061 677 aaKnown RBP eCLIP20.3■□□□□ 0.84
PTP4A1P2-201ENST00000546033 ARHGEF1Q92888 912 aaKnown RBP20.3■□□□□ 0.84
PTP4A1P2-201ENST00000546033 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
PTP4A1P2-201ENST00000546033 PLEKHF1Q96S99 279 aa20.3■□□□□ 0.84
PTP4A1P2-201ENST00000546033 TEX13AQ9BXU3 409 aaPredicted RBP20.3■□□□□ 0.84
PTP4A1P2-201ENST00000546033 CCDC87Q9NVE4 849 aa20.3■□□□□ 0.84
PTP4A1P2-201ENST00000546033 STARD3NLO95772 234 aa20.29■□□□□ 0.84
PTP4A1P2-201ENST00000546033 NFE2L2Q16236 605 aa20.29■□□□□ 0.84
PTP4A1P2-201ENST00000546033 NLGN1Q8N2Q7 840 aa20.29■□□□□ 0.84
PTP4A1P2-201ENST00000546033 CYP19A1P11511 503 aaPredicted RBP20.28■□□□□ 0.84
PTP4A1P2-201ENST00000546033 ZNF496Q96IT1 587 aaPredicted RBP20.28■□□□□ 0.84
PTP4A1P2-201ENST00000546033 HEG1Q9ULI3 1381 aa20.27■□□□□ 0.84
PTP4A1P2-201ENST00000546033 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
PTP4A1P2-201ENST00000546033 INTS5Q6P9B9 1019 aaKnown RBP20.26■□□□□ 0.83
PTP4A1P2-201ENST00000546033 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
PTP4A1P2-201ENST00000546033 CD2APQ9Y5K6 639 aa20.25■□□□□ 0.83
PTP4A1P2-201ENST00000546033 C4AP0C0L4 1744 aa20.24■□□□□ 0.83
PTP4A1P2-201ENST00000546033 ZPR1O75312 459 aa20.24■□□□□ 0.83
PTP4A1P2-201ENST00000546033 NPM2Q86SE8 214 aaKnown RBP20.24■□□□□ 0.83
PTP4A1P2-201ENST00000546033 PNISRQ8TF01 805 aaKnown RBP20.24■□□□□ 0.83
PTP4A1P2-201ENST00000546033 MMP10P09238 476 aa20.23■□□□□ 0.83
PTP4A1P2-201ENST00000546033 LMOD3Q0VAK6 560 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms