RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-225ENST00000545930 ARSIQ5FYB1 569 aa12.88□□□□□ -0.35
DDB1-225ENST00000545930 MEX3CQ5U5Q3 659 aaKnown RBP12.88□□□□□ -0.35
DDB1-225ENST00000545930 ANKRD24Q8TF21 1146 aa12.88□□□□□ -0.35
DDB1-225ENST00000545930 C2orf72A6NCS6 295 aa12.87□□□□□ -0.35
DDB1-225ENST00000545930 SLC34A2O95436 690 aa12.87□□□□□ -0.35
DDB1-225ENST00000545930 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
DDB1-225ENST00000545930 TMC2Q8TDI7 906 aa12.87□□□□□ -0.35
DDB1-225ENST00000545930 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
DDB1-225ENST00000545930 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
DDB1-225ENST00000545930 PTGER2P43116 358 aa12.86□□□□□ -0.35
DDB1-225ENST00000545930 LTV1Q96GA3 475 aaPredicted RBP12.86□□□□□ -0.35
DDB1-225ENST00000545930 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
DDB1-225ENST00000545930 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
DDB1-225ENST00000545930 ADAMTS8Q9UP79 889 aa12.86□□□□□ -0.35
DDB1-225ENST00000545930 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
DDB1-225ENST00000545930 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
DDB1-225ENST00000545930 COL18A1P39060 1754 aa12.85□□□□□ -0.35
DDB1-225ENST00000545930 EYA1Q99502 592 aa12.85□□□□□ -0.35
DDB1-225ENST00000545930 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
DDB1-225ENST00000545930 TOM1L2Q6ZVM7 507 aa12.84□□□□□ -0.35
DDB1-225ENST00000545930 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
DDB1-225ENST00000545930 NLRP2Q9NX02 1062 aa12.84□□□□□ -0.35
DDB1-225ENST00000545930 HS6ST3Q8IZP7 471 aa12.83□□□□□ -0.36
DDB1-225ENST00000545930 FNBP4Q8N3X1 1017 aaPredicted RBP12.83□□□□□ -0.36
DDB1-225ENST00000545930 RUNDC1Q96C34 613 aa12.83□□□□□ -0.36
DDB1-225ENST00000545930 C8orf37Q96NL8 207 aa12.83□□□□□ -0.36
DDB1-225ENST00000545930 RGPD5Q99666 1765 aa12.83□□□□□ -0.36
DDB1-225ENST00000545930 IGSF1Q8N6C5 1336 aa12.83□□□□□ -0.36
DDB1-225ENST00000545930 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
DDB1-225ENST00000545930 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 SULT6B1Q6IMI4 303 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 UNC5CLQ8IV45 518 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 CARD10Q9BWT7 1032 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 LMO7Q8WWI1 1683 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 CAMTA1Q9Y6Y1 1673 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 MAPK8IP3Q9UPT6 1336 aa12.82□□□□□ -0.36
DDB1-225ENST00000545930 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
DDB1-225ENST00000545930 RAPGEF4Q8WZA2 1011 aa12.81□□□□□ -0.36
DDB1-225ENST00000545930 THRAP3Q9Y2W1 955 aaKnown RBP12.81□□□□□ -0.36
DDB1-225ENST00000545930 NWD2Q9ULI1 1742 aa12.81□□□□□ -0.36
DDB1-225ENST00000545930 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
DDB1-225ENST00000545930 SLIT2O94813 1529 aa12.8□□□□□ -0.36
DDB1-225ENST00000545930 HMOX1P09601 288 aa12.8□□□□□ -0.36
DDB1-225ENST00000545930 CDCA7Q9BWT1 371 aaPredicted RBP12.8□□□□□ -0.36
DDB1-225ENST00000545930 RSPH6AQ9H0K4 717 aa12.8□□□□□ -0.36
DDB1-225ENST00000545930 USP21Q9UK80 565 aa12.8□□□□□ -0.36
DDB1-225ENST00000545930 CRB1P82279 1406 aa12.79□□□□□ -0.36
DDB1-225ENST00000545930 TATP17735 454 aaPredicted RBP12.79□□□□□ -0.36
DDB1-225ENST00000545930 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
DDB1-225ENST00000545930 AMOTQ4VCS5 1084 aa12.79□□□□□ -0.36
DDB1-225ENST00000545930 RNF166Q96A37 237 aaPredicted RBP12.79□□□□□ -0.36
DDB1-225ENST00000545930 KDRP35968 1356 aa12.79□□□□□ -0.36
DDB1-225ENST00000545930 VPS72Q15906 364 aa12.78□□□□□ -0.36
DDB1-225ENST00000545930 PLEKHO1Q53GL0 409 aaPredicted RBP12.78□□□□□ -0.36
DDB1-225ENST00000545930 ZNF772Q68DY9 489 aaPredicted RBP12.78□□□□□ -0.36
DDB1-225ENST00000545930 LARP1Q6PKG0 1096 aaKnown RBP12.78□□□□□ -0.36
DDB1-225ENST00000545930 PLEKHF1Q96S99 279 aa12.78□□□□□ -0.36
DDB1-225ENST00000545930 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
DDB1-225ENST00000545930 LRP6O75581 1613 aa12.77□□□□□ -0.36
DDB1-225ENST00000545930 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.36
DDB1-225ENST00000545930 RGPD1P0DJD0 1748 aa12.77□□□□□ -0.36
DDB1-225ENST00000545930 PBX2P40425 430 aa12.77□□□□□ -0.37
DDB1-225ENST00000545930 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
DDB1-225ENST00000545930 GAS2L2Q8NHY3 880 aa12.77□□□□□ -0.37
DDB1-225ENST00000545930 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
DDB1-225ENST00000545930 AFF2P51816 1311 aa12.77□□□□□ -0.37
DDB1-225ENST00000545930 IL2RBP14784 551 aa12.76□□□□□ -0.37
DDB1-225ENST00000545930 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
DDB1-225ENST00000545930 USHBP1Q8N6Y0 703 aa12.76□□□□□ -0.37
DDB1-225ENST00000545930 SPG7Q9UQ90 795 aa12.76□□□□□ -0.37
DDB1-225ENST00000545930 PCDHGA4Q9Y5G9 962 aa12.76□□□□□ -0.37
DDB1-225ENST00000545930 NCAPD2Q15021 1401 aa12.76□□□□□ -0.37
DDB1-225ENST00000545930 APAF1O14727 1248 aa12.75□□□□□ -0.37
DDB1-225ENST00000545930 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
DDB1-225ENST00000545930 HNRNPUQ00839 825 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDB1-225ENST00000545930 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
DDB1-225ENST00000545930 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
DDB1-225ENST00000545930 SPATA31A5Q5VU36 1347 aa12.75□□□□□ -0.37
DDB1-225ENST00000545930 AEBP1Q8IUX7 1158 aa12.75□□□□□ -0.37
DDB1-225ENST00000545930 SPATA31A7Q8IWB4 1347 aa12.75□□□□□ -0.37
DDB1-225ENST00000545930 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDB1-225ENST00000545930 RYDENQ9NUL5 291 aaKnown RBP12.75□□□□□ -0.37
DDB1-225ENST00000545930 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.74□□□□□ -0.37
DDB1-225ENST00000545930 BCL9LQ86UU0 1499 aa12.74□□□□□ -0.37
DDB1-225ENST00000545930 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
DDB1-225ENST00000545930 HTATSF1O43719 755 aaKnown RBP12.74□□□□□ -0.37
DDB1-225ENST00000545930 PPP1R37O75864 691 aa12.74□□□□□ -0.37
DDB1-225ENST00000545930 NUDT7P0C024 238 aa12.74□□□□□ -0.37
DDB1-225ENST00000545930 NFE2L2Q16236 605 aa12.74□□□□□ -0.37
DDB1-225ENST00000545930 BARGINQ6ZT62 677 aa12.74□□□□□ -0.37
DDB1-225ENST00000545930 QTRT2Q9H974 415 aaKnown RBP12.74□□□□□ -0.37
DDB1-225ENST00000545930 USP35Q9P2H5 1018 aa12.74□□□□□ -0.37
DDB1-225ENST00000545930 EXOC5O00471 708 aa12.73□□□□□ -0.37
DDB1-225ENST00000545930 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
DDB1-225ENST00000545930 RIPK4P57078 832 aa12.73□□□□□ -0.37
DDB1-225ENST00000545930 RTF1Q92541 710 aaKnown RBP12.73□□□□□ -0.37
DDB1-225ENST00000545930 NRAPQ86VF7 1730 aa12.73□□□□□ -0.37
DDB1-225ENST00000545930 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms