RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 INHAP05111 366 aa10.43□□□□□ -0.74
SNHG1-224ENST00000545688 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
SNHG1-224ENST00000545688 NCOA4Q13772 614 aa10.43□□□□□ -0.74
SNHG1-224ENST00000545688 C4orf17Q53FE4 359 aa10.43□□□□□ -0.74
SNHG1-224ENST00000545688 GNASQ5JWF2 1037 aa10.43□□□□□ -0.74
SNHG1-224ENST00000545688 PROSER2Q86WR7 435 aaPredicted RBP10.43□□□□□ -0.74
SNHG1-224ENST00000545688 DEPDC4Q8N2C3 294 aa10.43□□□□□ -0.74
SNHG1-224ENST00000545688 PCDHGA11Q9Y5H2 935 aa10.43□□□□□ -0.74
SNHG1-224ENST00000545688 USP17L5A8MUK1 530 aa10.42□□□□□ -0.74
SNHG1-224ENST00000545688 TMEM229AB2RXF0 380 aa10.42□□□□□ -0.74
SNHG1-224ENST00000545688 FNBP4Q8N3X1 1017 aaPredicted RBP10.42□□□□□ -0.74
SNHG1-224ENST00000545688 UCN2Q96RP3 112 aa10.42□□□□□ -0.74
SNHG1-224ENST00000545688 NOD1Q9Y239 953 aa10.42□□□□□ -0.74
SNHG1-224ENST00000545688 GPR25O00155 361 aa10.41□□□□□ -0.74
SNHG1-224ENST00000545688 F11P03951 625 aa10.41□□□□□ -0.74
SNHG1-224ENST00000545688 GAS6Q14393 721 aa10.41□□□□□ -0.74
SNHG1-224ENST00000545688 PPARGC1BQ86YN6 1023 aaKnown RBP10.41□□□□□ -0.74
SNHG1-224ENST00000545688 GMCL1Q96IK5 515 aa10.41□□□□□ -0.74
SNHG1-224ENST00000545688 GPAMQ9HCL2 828 aa10.41□□□□□ -0.74
SNHG1-224ENST00000545688 SERTAD1Q9UHV2 236 aa10.41□□□□□ -0.74
SNHG1-224ENST00000545688 LZTS3O60299 673 aaPredicted RBP10.4□□□□□ -0.74
SNHG1-224ENST00000545688 GTF2IP78347 998 aa10.4□□□□□ -0.74
SNHG1-224ENST00000545688 RHBDD1Q8TEB9 315 aa10.4□□□□□ -0.74
SNHG1-224ENST00000545688 H7C1W4 665 aa10.39□□□□□ -0.75
SNHG1-224ENST00000545688 TBC1D9Q6ZT07 1266 aa10.39□□□□□ -0.75
SNHG1-224ENST00000545688 GTPBP3Q969Y2 492 aaKnown RBP10.39□□□□□ -0.75
SNHG1-224ENST00000545688 A0A1B0GTH6 734 aa10.38□□□□□ -0.75
SNHG1-224ENST00000545688 SMTNP53814 917 aa10.38□□□□□ -0.75
SNHG1-224ENST00000545688 NUCKS1Q9H1E3 243 aaKnown RBP10.38□□□□□ -0.75
SNHG1-224ENST00000545688 THBS1P07996 1170 aa10.37□□□□□ -0.75
SNHG1-224ENST00000545688 GLMNQ92990 594 aa10.37□□□□□ -0.75
SNHG1-224ENST00000545688 USP17L3A6NCW0 530 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 USP17L4A6NCW7 530 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 ATP9BO43861 1147 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 SLURP2P0DP57 97 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 PLA2G4AP47712 749 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 PSME1Q06323 249 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 FOXR1Q6PIV2 292 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 USP17L2Q6R6M4 530 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 USP17L1Q7RTZ2 530 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 WHAMMQ8TF30 809 aa10.36□□□□□ -0.75
SNHG1-224ENST00000545688 A6NJR5 290 aa10.35□□□□□ -0.75
SNHG1-224ENST00000545688 ADAMTS2O95450 1211 aa10.35□□□□□ -0.75
SNHG1-224ENST00000545688 MSX1P28360 303 aa10.35□□□□□ -0.75
SNHG1-224ENST00000545688 ZNF385CQ66K41 422 aaPredicted RBP10.35□□□□□ -0.75
SNHG1-224ENST00000545688 PLEKHM2Q8IWE5 1019 aa10.35□□□□□ -0.75
SNHG1-224ENST00000545688 SLC4A9Q96Q91 983 aa10.35□□□□□ -0.75
SNHG1-224ENST00000545688 RUBCNLQ9H714 662 aa10.35□□□□□ -0.75
SNHG1-224ENST00000545688 USP3Q9Y6I4 520 aa10.35□□□□□ -0.75
SNHG1-224ENST00000545688 A6NJY4 79 aa10.34□□□□□ -0.75
SNHG1-224ENST00000545688 MTFR1Q15390 333 aa10.34□□□□□ -0.75
SNHG1-224ENST00000545688 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.34□□□□□ -0.752e-85■□□□□ 9.7
SNHG1-224ENST00000545688 ZNF358Q9NW07 568 aa10.34□□□□□ -0.75
SNHG1-224ENST00000545688 SRSF11Q05519 484 aaKnown RBP10.33□□□□□ -0.76
SNHG1-224ENST00000545688 ZNF295-AS1Q8N0V1 137 aa10.33□□□□□ -0.76
SNHG1-224ENST00000545688 TRERF1Q96PN7 1200 aa10.33□□□□□ -0.76
SNHG1-224ENST00000545688 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
SNHG1-224ENST00000545688 MBIPQ9NS73 344 aa10.33□□□□□ -0.76
SNHG1-224ENST00000545688 IQSEC3Q9UPP2 1182 aaPredicted RBP10.33□□□□□ -0.76
SNHG1-224ENST00000545688 TRIM50Q86XT4 487 aa10.32□□□□□ -0.76
SNHG1-224ENST00000545688 SVOPQ8N4V2 548 aa10.32□□□□□ -0.76
SNHG1-224ENST00000545688 KIAA1024Q9UPX6 916 aa10.32□□□□□ -0.76
SNHG1-224ENST00000545688 CDK2AP1O14519 115 aa10.31□□□□□ -0.76
SNHG1-224ENST00000545688 BACH1O14867 736 aa10.31□□□□□ -0.76
SNHG1-224ENST00000545688 CSB-PGBD3P0DP91 1061 aa10.31□□□□□ -0.76
SNHG1-224ENST00000545688 CLDN10P78369 228 aa10.31□□□□□ -0.76
SNHG1-224ENST00000545688 PGBD3Q8N328 593 aa10.31□□□□□ -0.76
SNHG1-224ENST00000545688 ZBTB7BO15156 539 aaPredicted RBP10.3□□□□□ -0.76
SNHG1-224ENST00000545688 UBAP2LQ14157 1087 aaKnown RBP10.3□□□□□ -0.76
SNHG1-224ENST00000545688 AIDAQ96BJ3 306 aa10.3□□□□□ -0.76
SNHG1-224ENST00000545688 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
SNHG1-224ENST00000545688 IGF1RP08069 1367 aa10.29□□□□□ -0.76
SNHG1-224ENST00000545688 ATP4AP20648 1035 aa10.29□□□□□ -0.76
SNHG1-224ENST00000545688 ATP1A2P50993 1020 aa10.29□□□□□ -0.76
SNHG1-224ENST00000545688 LBRQ14739 615 aaKnown RBP10.29□□□□□ -0.76
SNHG1-224ENST00000545688 LYPD4Q6UWN0 246 aa10.29□□□□□ -0.76
SNHG1-224ENST00000545688 TPCN2Q8NHX9 752 aa10.29□□□□□ -0.76
SNHG1-224ENST00000545688 CALR3Q96L12 384 aaKnown RBP10.29□□□□□ -0.76
SNHG1-224ENST00000545688 CRISPLD1Q9H336 500 aa10.29□□□□□ -0.76
SNHG1-224ENST00000545688 CABP1Q9NZU7 370 aa10.29□□□□□ -0.76
SNHG1-224ENST00000545688 TFIP11Q9UBB9 837 aaKnown RBP10.29□□□□□ -0.76
SNHG1-224ENST00000545688 MX2P20592 715 aa10.28□□□□□ -0.76
SNHG1-224ENST00000545688 CCDC102BQ68D86 513 aa10.28□□□□□ -0.76
SNHG1-224ENST00000545688 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
SNHG1-224ENST00000545688 DNAAF2Q9NVR5 837 aaKnown RBP10.28□□□□□ -0.76
SNHG1-224ENST00000545688 SCHIP1Q9P0W5 487 aaPredicted RBP10.28□□□□□ -0.76
SNHG1-224ENST00000545688 EPHA4P54764 986 aa10.27□□□□□ -0.77
SNHG1-224ENST00000545688 EFHC2Q5JST6 749 aa10.27□□□□□ -0.77
SNHG1-224ENST00000545688 TNS4Q8IZW8 715 aa10.27□□□□□ -0.77
SNHG1-224ENST00000545688 ADAMTS8Q9UP79 889 aa10.27□□□□□ -0.77
SNHG1-224ENST00000545688 MAFBQ9Y5Q3 323 aaPredicted RBP10.27□□□□□ -0.77
SNHG1-224ENST00000545688 PARP3Q9Y6F1 533 aa10.27□□□□□ -0.77
SNHG1-224ENST00000545688 PALM3A6NDB9 673 aaPredicted RBP10.26□□□□□ -0.77
SNHG1-224ENST00000545688 ARHGEF15O94989 841 aa10.26□□□□□ -0.77
SNHG1-224ENST00000545688 CELA2BP08218 269 aaPredicted RBP10.26□□□□□ -0.77
SNHG1-224ENST00000545688 FOXK2Q01167 660 aa10.26□□□□□ -0.77
SNHG1-224ENST00000545688 C1orf216Q8TAB5 229 aa10.26□□□□□ -0.77
SNHG1-224ENST00000545688 CFHR5Q9BXR6 569 aa10.26□□□□□ -0.77
SNHG1-224ENST00000545688 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
SNHG1-224ENST00000545688 TBCELQ5QJ74 424 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms