RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 NLGN1Q8N2Q7 840 aa20.61■□□□□ 0.89
RTN3-214ENST00000545432 ATG3Q9NT62 314 aa20.61■□□□□ 0.89
RTN3-214ENST00000545432 PHKG2P15735 406 aa20.6■□□□□ 0.89
RTN3-214ENST00000545432 RC3H1Q5TC82 1133 aaKnown RBP20.6■□□□□ 0.89
RTN3-214ENST00000545432 EYA1Q99502 592 aa20.6■□□□□ 0.89
RTN3-214ENST00000545432 TMOD3Q9NYL9 352 aa20.6■□□□□ 0.89
RTN3-214ENST00000545432 KIAA1551Q9HCM1 1747 aa20.6■□□□□ 0.89
RTN3-214ENST00000545432 IFNL2Q8IZJ0 200 aa20.59■□□□□ 0.89
RTN3-214ENST00000545432 C10orf71Q711Q0 1435 aa20.59■□□□□ 0.89
RTN3-214ENST00000545432 KDRP35968 1356 aa20.59■□□□□ 0.89
RTN3-214ENST00000545432 SLC4A9Q96Q91 983 aa20.58■□□□□ 0.89
RTN3-214ENST00000545432 A0A0G2JLW4 131 aa20.57■□□□□ 0.88
RTN3-214ENST00000545432 ADRA2BP18089 450 aa20.57■□□□□ 0.88
RTN3-214ENST00000545432 KCNA3P22001 575 aa20.57■□□□□ 0.88
RTN3-214ENST00000545432 TRAPPC3LQ5T215 181 aa20.57■□□□□ 0.88
RTN3-214ENST00000545432 RBM46Q8TBY0 533 aaKnown RBP20.57■□□□□ 0.88
RTN3-214ENST00000545432 CDCA8Q53HL2 280 aa20.56■□□□□ 0.88
RTN3-214ENST00000545432 ARHGEF1Q92888 912 aaKnown RBP20.56■□□□□ 0.88
RTN3-214ENST00000545432 NMRK2Q9NPI5 230 aa20.56■□□□□ 0.88
RTN3-214ENST00000545432 BCS1LQ9Y276 419 aa20.56■□□□□ 0.88
RTN3-214ENST00000545432 GYS1P13807 737 aa20.55■□□□□ 0.88
RTN3-214ENST00000545432 JMYQ8N9B5 988 aa20.55■□□□□ 0.88
RTN3-214ENST00000545432 RTCBQ9Y3I0 505 aaKnown RBP20.55■□□□□ 0.88
RTN3-214ENST00000545432 ERVV-2B6SEH9 535 aa20.54■□□□□ 0.88
RTN3-214ENST00000545432 DPEP1P16444 411 aa20.54■□□□□ 0.88
RTN3-214ENST00000545432 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
RTN3-214ENST00000545432 CNTNAP4Q9C0A0 1308 aa20.53■□□□□ 0.88
RTN3-214ENST00000545432 RPS6KA4O75676 772 aa20.53■□□□□ 0.88
RTN3-214ENST00000545432 ARHGAP27Q6ZUM4 889 aa20.53■□□□□ 0.88
RTN3-214ENST00000545432 CCDC87Q9NVE4 849 aa20.53■□□□□ 0.88
RTN3-214ENST00000545432 POLKQ9UBT6 870 aa20.53■□□□□ 0.88
RTN3-214ENST00000545432 ANKRD26Q9UPS8 1709 aa20.53■□□□□ 0.88
RTN3-214ENST00000545432 KIF20BQ96Q89 1820 aa20.52■□□□□ 0.88
RTN3-214ENST00000545432 FSTL1Q12841 308 aa20.51■□□□□ 0.87
RTN3-214ENST00000545432 FCHSD2O94868 740 aa20.5■□□□□ 0.87
RTN3-214ENST00000545432 KLRG1Q96E93 195 aa20.5■□□□□ 0.87
RTN3-214ENST00000545432 N4BP2Q86UW6 1770 aaPredicted RBP20.49■□□□□ 0.87
RTN3-214ENST00000545432 C9orf131Q5VYM1 1079 aa20.49■□□□□ 0.87
RTN3-214ENST00000545432 DCAF5Q96JK2 942 aa20.49■□□□□ 0.87
RTN3-214ENST00000545432 BRCA1P38398 1863 aaKnown RBP20.48■□□□□ 0.87
RTN3-214ENST00000545432 PARP3Q9Y6F1 533 aa20.48■□□□□ 0.87
RTN3-214ENST00000545432 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
RTN3-214ENST00000545432 PPM1GO15355 546 aaPredicted RBP20.47■□□□□ 0.87
RTN3-214ENST00000545432 EIF4A2Q14240 407 aaKnown RBP20.47■□□□□ 0.87
RTN3-214ENST00000545432 PIM2Q9P1W9 311 aa20.47■□□□□ 0.87
RTN3-214ENST00000545432 HSP90AB1P08238 724 aaKnown RBP20.46■□□□□ 0.87
RTN3-214ENST00000545432 RFC4P35249 363 aa20.46■□□□□ 0.87
RTN3-214ENST00000545432 COL13A1Q5TAT6 717 aaPredicted RBP20.44■□□□□ 0.86
RTN3-214ENST00000545432 RBM42Q9BTD8 480 aaKnown RBP20.44■□□□□ 0.86
RTN3-214ENST00000545432 WDR90Q96KV7 1748 aa20.44■□□□□ 0.86
RTN3-214ENST00000545432 ARFGEF1Q9Y6D6 1849 aa20.43■□□□□ 0.86
RTN3-214ENST00000545432 MYH14Q7Z406 1995 aaKnown RBP20.43■□□□□ 0.86
RTN3-214ENST00000545432 COL5A3P25940 1745 aaPredicted RBP20.43■□□□□ 0.86
RTN3-214ENST00000545432 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
RTN3-214ENST00000545432 TM4SF1P30408 202 aa20.42■□□□□ 0.86
RTN3-214ENST00000545432 HTRA3P83110 453 aa20.42■□□□□ 0.86
RTN3-214ENST00000545432 DALRD3Q5D0E6 543 aaKnown RBP20.42■□□□□ 0.86
RTN3-214ENST00000545432 KDM6AO15550 1401 aaPredicted RBP20.42■□□□□ 0.86
RTN3-214ENST00000545432 DDR1Q08345 913 aa20.41■□□□□ 0.86
RTN3-214ENST00000545432 C16orf71Q8IYS4 520 aaPredicted RBP20.41■□□□□ 0.86
RTN3-214ENST00000545432 USP42Q9H9J4 1324 aaKnown RBP20.41■□□□□ 0.86
RTN3-214ENST00000545432 FKBP8Q14318 412 aa20.4■□□□□ 0.86
RTN3-214ENST00000545432 AMOTQ4VCS5 1084 aa20.4■□□□□ 0.86
RTN3-214ENST00000545432 PLEKHO1Q53GL0 409 aaPredicted RBP20.4■□□□□ 0.86
RTN3-214ENST00000545432 KCPQ6ZWJ8 1503 aa20.39■□□□□ 0.85
RTN3-214ENST00000545432 ZC3H4Q9UPT8 1303 aaKnown RBP20.39■□□□□ 0.85
RTN3-214ENST00000545432 CRKLP46109 303 aaKnown RBP20.39■□□□□ 0.85
RTN3-214ENST00000545432 RRAGCQ9HB90 399 aa20.39■□□□□ 0.85
RTN3-214ENST00000545432 RNF181Q9P0P0 153 aa20.39■□□□□ 0.85
RTN3-214ENST00000545432 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
RTN3-214ENST00000545432 CABP4P57796 275 aa20.38■□□□□ 0.85
RTN3-214ENST00000545432 SRP68Q9UHB9 627 aaKnown RBP20.38■□□□□ 0.85
RTN3-214ENST00000545432 INTS5Q6P9B9 1019 aaKnown RBP20.37■□□□□ 0.85
RTN3-214ENST00000545432 SMC1BQ8NDV3 1235 aa20.36■□□□□ 0.85
RTN3-214ENST00000545432 CHRNA5P30532 468 aa20.35■□□□□ 0.85
RTN3-214ENST00000545432 ZNF530Q6P9A1 599 aaPredicted RBP20.35■□□□□ 0.85
RTN3-214ENST00000545432 PTCD1O75127 700 aaKnown RBP20.34■□□□□ 0.85
RTN3-214ENST00000545432 MTHFSP49914 203 aa20.34■□□□□ 0.85
RTN3-214ENST00000545432 NFATC2IPQ8NCF5 419 aa20.34■□□□□ 0.85
RTN3-214ENST00000545432 ADAMTS7Q9UKP4 1686 aa20.34■□□□□ 0.85
RTN3-214ENST00000545432 SBF1O95248 1867 aa20.34■□□□□ 0.85
RTN3-214ENST00000545432 PRELPP51888 382 aa20.33■□□□□ 0.85
RTN3-214ENST00000545432 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
RTN3-214ENST00000545432 PCNTO95613 3336 aa20.3■□□□□ 0.84
RTN3-214ENST00000545432 TNRC6CQ9HCJ0 1690 aaKnown RBP20.3■□□□□ 0.84
RTN3-214ENST00000545432 TNS4Q8IZW8 715 aa20.3■□□□□ 0.84
RTN3-214ENST00000545432 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
RTN3-214ENST00000545432 VEGFAP15692 232 aaPredicted RBP20.29■□□□□ 0.84
RTN3-214ENST00000545432 LMNB1P20700 586 aa20.29■□□□□ 0.84
RTN3-214ENST00000545432 TJP1Q07157 1748 aa20.28■□□□□ 0.84
RTN3-214ENST00000545432 TNNT2P45379 298 aaPredicted RBP20.28■□□□□ 0.84
RTN3-214ENST00000545432 C1orf141Q5JVX7 400 aa20.28■□□□□ 0.84
RTN3-214ENST00000545432 USPL1Q5W0Q7 1092 aa20.28■□□□□ 0.84
RTN3-214ENST00000545432 AEBP1Q8IUX7 1158 aa20.28■□□□□ 0.84
RTN3-214ENST00000545432 TIMELESSQ9UNS1 1208 aa20.28■□□□□ 0.84
RTN3-214ENST00000545432 POTECB2RU33 542 aa20.27■□□□□ 0.84
RTN3-214ENST00000545432 CYP19A1P11511 503 aaPredicted RBP20.27■□□□□ 0.84
RTN3-214ENST00000545432 NFIXQ14938 502 aa20.27■□□□□ 0.84
RTN3-214ENST00000545432 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
RTN3-214ENST00000545432 ZPR1O75312 459 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms