RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 SART3Q15020 963 aaKnown RBP10.01□□□□□ -0.81
ATXN3-216ENST00000545170 CCDC150Q8NCX0 1101 aa10.01□□□□□ -0.81
ATXN3-216ENST00000545170 TBC1D2Q9BYX2 928 aa10.01□□□□□ -0.81
ATXN3-216ENST00000545170 ZNF622Q969S3 477 aaKnown RBP eCLIP10.01□□□□□ -0.81
ATXN3-216ENST00000545170 RNF216Q9NWF9 866 aaPredicted RBP10.01□□□□□ -0.81
ATXN3-216ENST00000545170 PPP6R1Q9UPN7 881 aa10.01□□□□□ -0.81
ATXN3-216ENST00000545170 KIF27Q86VH2 1401 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 PCK1P35558 622 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 LRSAM1Q6UWE0 723 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 ZEB2O60315 1214 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 ZSCAN31Q96LW9 406 aaPredicted RBP10□□□□□ -0.81
ATXN3-216ENST00000545170 ALS2CR12Q96Q35 445 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 ATP11AP98196 1134 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 JADE2Q9NQC1 790 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 GABPB1Q06547 395 aaPredicted RBP10□□□□□ -0.81
ATXN3-216ENST00000545170 CHD1LQ86WJ1 897 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 GOLGA1Q92805 767 aa10□□□□□ -0.81
ATXN3-216ENST00000545170 CCDC7Q96M83 1385 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 UBTFL1P0CB47 393 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-216ENST00000545170 LACTBP83111 547 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-216ENST00000545170 CEP128Q6ZU80 1094 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 TAOK3Q9H2K8 898 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 BCAR3O75815 825 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 RFC1P35251 1148 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-216ENST00000545170 SOGA3Q5TF21 947 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 POTEDQ86YR6 584 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 DNAI1Q9UI46 699 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 LUC7L2Q9Y383 392 aaKnown RBP9.99□□□□□ -0.81
ATXN3-216ENST00000545170 A0A1W2PRG0 241 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 PHACTR2O75167 634 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 GTF2E1P29083 439 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-216ENST00000545170 FAM160A1Q05DH4 1040 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 PDE3AQ14432 1141 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 DNAJC21Q5F1R6 531 aaKnown RBP9.99□□□□□ -0.81
ATXN3-216ENST00000545170 VPS37DQ86XT2 251 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 PAF1Q8N7H5 531 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 YEATS4O95619 227 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 CCDC50Q8IVM0 306 aa9.99□□□□□ -0.81
ATXN3-216ENST00000545170 CTNNBL1Q8WYA6 563 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-216ENST00000545170 ATP6V1AP38606 617 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 STX1AQ16623 288 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 KLHL10Q6JEL2 608 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 APBB1IPQ7Z5R6 666 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-216ENST00000545170 JAKMIP1Q96N16 626 aaKnown RBP9.98□□□□□ -0.81
ATXN3-216ENST00000545170 INPP5BP32019 993 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 CTAGE15A4D2H0 777 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 CTAGE8P0CG41 777 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 CKAP4Q07065 602 aaKnown RBP9.98□□□□□ -0.81
ATXN3-216ENST00000545170 CCDC129Q6ZRS4 1044 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 CTAGE6Q86UF2 777 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 CTAGE4Q8IX94 777 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 SELENOSQ9BQE4 189 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 NOB1Q9ULX3 412 aaKnown RBP9.98□□□□□ -0.81
ATXN3-216ENST00000545170 CCDC155Q8N6L0 562 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 BRD4O60885 1362 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-216ENST00000545170 ZNF853P0CG23 659 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 SAMD1Q6SPF0 538 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-216ENST00000545170 FAM76AQ8TAV0 307 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 TMEM132AQ24JP5 1023 aa9.98□□□□□ -0.81
ATXN3-216ENST00000545170 CWC25Q9NXE8 425 aaPredicted RBP9.98□□□□□ -0.81
ATXN3-216ENST00000545170 FSD2A1L4K1 749 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 GBP1P32455 592 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
ATXN3-216ENST00000545170 FKBP15Q5T1M5 1219 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 CTAGE5O15320 804 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 PPP1R12BO60237 982 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-216ENST00000545170 KLHL40Q2TBA0 621 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.97□□□□□ -0.81
ATXN3-216ENST00000545170 B4GALNT4Q76KP1 1039 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 CACNA2D4Q7Z3S7 1137 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 CPLX4Q7Z7G2 160 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 RPUSD2Q8IZ73 545 aaKnown RBP9.97□□□□□ -0.81
ATXN3-216ENST00000545170 GBP7Q8N8V2 638 aaPredicted RBP9.97□□□□□ -0.81
ATXN3-216ENST00000545170 BICRAQ9NZM4 1560 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 BAG4O95429 457 aaKnown RBP9.97□□□□□ -0.81
ATXN3-216ENST00000545170 DDX58O95786 925 aaKnown RBP9.97□□□□□ -0.81
ATXN3-216ENST00000545170 C1orf141Q5JVX7 400 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 SKAP1Q86WV1 359 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 ANAPC15P60006 121 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 GNAI1P63096 354 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 LARP1Q6PKG0 1096 aaKnown RBP9.97□□□□□ -0.81
ATXN3-216ENST00000545170 FERMT3Q86UX7 667 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 PPFIBP2Q8ND30 876 aa9.97□□□□□ -0.81
ATXN3-216ENST00000545170 DIAPH1O60610 1272 aaKnown RBP9.96□□□□□ -0.81
ATXN3-216ENST00000545170 TACC1O75410 805 aa9.96□□□□□ -0.81
ATXN3-216ENST00000545170 TTC12Q9H892 705 aaPredicted RBP9.96□□□□□ -0.81
ATXN3-216ENST00000545170 HOMER2Q9NSB8 354 aa9.96□□□□□ -0.81
ATXN3-216ENST00000545170 NOL7Q9UMY1 257 aaKnown RBP9.96□□□□□ -0.81
ATXN3-216ENST00000545170 RABGAP1Q9Y3P9 1069 aa9.96□□□□□ -0.81
ATXN3-216ENST00000545170 SURF6O75683 361 aaKnown RBP9.96□□□□□ -0.81
ATXN3-216ENST00000545170 ZWINTO95229 277 aa9.96□□□□□ -0.81
ATXN3-216ENST00000545170 TMCO4Q5TGY1 634 aa9.96□□□□□ -0.81
ATXN3-216ENST00000545170 ZMAT2Q96NC0 199 aaKnown RBP9.96□□□□□ -0.81
ATXN3-216ENST00000545170 GDPD2Q9HCC8 539 aa9.96□□□□□ -0.81
ATXN3-216ENST00000545170 SKILP12757 684 aa9.96□□□□□ -0.81
ATXN3-216ENST00000545170 CASTP20810 708 aaKnown RBP9.96□□□□□ -0.81
ATXN3-216ENST00000545170 HDXQ7Z353 690 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 HOOK3Q86VS8 718 aa9.96□□□□□ -0.82
ATXN3-216ENST00000545170 AFAP1L1Q8TED9 768 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms