RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 WNK3Q9BYP7 1800 aa10.1□□□□□ -0.79
CPSF7-224ENST00000544990 FAM208AQ9UK61 1670 aaKnown RBP10.1□□□□□ -0.79
CPSF7-224ENST00000544990 EXOC5O00471 708 aa10.1□□□□□ -0.79
CPSF7-224ENST00000544990 HOXC9P31274 260 aa10.1□□□□□ -0.79
CPSF7-224ENST00000544990 BAG6P46379 1132 aa10.1□□□□□ -0.79
CPSF7-224ENST00000544990 RRS1Q15050 365 aaKnown RBP10.1□□□□□ -0.79
CPSF7-224ENST00000544990 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.1□□□□□ -0.79
CPSF7-224ENST00000544990 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
CPSF7-224ENST00000544990 LTV1Q96GA3 475 aaPredicted RBP10.1□□□□□ -0.79
CPSF7-224ENST00000544990 RTL1A6NKG5 1358 aa10.1□□□□□ -0.79
CPSF7-224ENST00000544990 RGPD1P0DJD0 1748 aa10.1□□□□□ -0.79
CPSF7-224ENST00000544990 MAP2P11137 1827 aaKnown RBP10.1□□□□□ -0.79
CPSF7-224ENST00000544990 KNSTRNQ9Y448 316 aa10.09□□□□□ -0.79
CPSF7-224ENST00000544990 KIF24Q5T7B8 1368 aa10.09□□□□□ -0.79
CPSF7-224ENST00000544990 KIF7Q2M1P5 1343 aa10.08□□□□□ -0.8
CPSF7-224ENST00000544990 SMG6Q86US8 1419 aaKnown RBP10.08□□□□□ -0.8
CPSF7-224ENST00000544990 ANKRD26Q9UPS8 1709 aa10.08□□□□□ -0.8
CPSF7-224ENST00000544990 IL2RBP14784 551 aa10.08□□□□□ -0.8
CPSF7-224ENST00000544990 CAMK2BQ13554 666 aa10.08□□□□□ -0.8
CPSF7-224ENST00000544990 ARIH1Q9Y4X5 557 aaPredicted RBP10.08□□□□□ -0.8
CPSF7-224ENST00000544990 LRRC37A3O60309 1634 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 NSD2O96028 1365 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 FLT4P35916 1363 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 SEMA3EO15041 775 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 TRIM37O94972 964 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 POTEHQ6S545 545 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 DEFB132Q7Z7B7 95 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 OVOS2A0A0G2JMS6 1433 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 DISP2A7MBM2 1401 aa10.07□□□□□ -0.8
CPSF7-224ENST00000544990 INSRP06213 1382 aa10.06□□□□□ -0.8
CPSF7-224ENST00000544990 PPM1GO15355 546 aaPredicted RBP10.06□□□□□ -0.8
CPSF7-224ENST00000544990 HSP90AB2PQ58FF8 381 aa10.06□□□□□ -0.8
CPSF7-224ENST00000544990 RGPD2P0DJD1 1756 aa10.06□□□□□ -0.8
CPSF7-224ENST00000544990 TESPA1A2RU30 521 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-224ENST00000544990 APBA3O96018 575 aa10.05□□□□□ -0.8
CPSF7-224ENST00000544990 TNNT2P45379 298 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-224ENST00000544990 MORC1Q86VD1 984 aa10.05□□□□□ -0.8
CPSF7-224ENST00000544990 MARCH10Q8NA82 808 aaPredicted RBP10.05□□□□□ -0.8
CPSF7-224ENST00000544990 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
CPSF7-224ENST00000544990 EMILIN1Q9Y6C2 1016 aa10.05□□□□□ -0.8
CPSF7-224ENST00000544990 KAT6BQ8WYB5 2073 aa10.04□□□□□ -0.8
CPSF7-224ENST00000544990 EN1Q05925 392 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-224ENST00000544990 TMEM121BQ9BXQ6 578 aaPredicted RBP10.04□□□□□ -0.8
CPSF7-224ENST00000544990 POLKQ9UBT6 870 aa10.04□□□□□ -0.8
CPSF7-224ENST00000544990 SBF2Q86WG5 1849 aa10.04□□□□□ -0.8
CPSF7-224ENST00000544990 TNS2Q63HR2 1409 aa10.04□□□□□ -0.8
CPSF7-224ENST00000544990 PEAK1Q9H792 1746 aa10.04□□□□□ -0.8
CPSF7-224ENST00000544990 TNS1Q9HBL0 1735 aaKnown RBP10.04□□□□□ -0.8
CPSF7-224ENST00000544990 WASHC2AQ641Q2 1341 aa10.04□□□□□ -0.8
CPSF7-224ENST00000544990 EP400Q96L91 3159 aa10.04□□□□□ -0.8
CPSF7-224ENST00000544990 BCL9O00512 1426 aa10.03□□□□□ -0.8
CPSF7-224ENST00000544990 DSG2Q14126 1118 aa10.03□□□□□ -0.8
CPSF7-224ENST00000544990 NBPF6Q5VWK0 638 aa10.03□□□□□ -0.8
CPSF7-224ENST00000544990 RAPGEF4Q8WZA2 1011 aa10.03□□□□□ -0.8
CPSF7-224ENST00000544990 NBPF4Q96M43 638 aa10.03□□□□□ -0.8
CPSF7-224ENST00000544990 C7P10643 843 aa10.02□□□□□ -0.81
CPSF7-224ENST00000544990 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
CPSF7-224ENST00000544990 FOXK1P85037 733 aa10.02□□□□□ -0.81
CPSF7-224ENST00000544990 ZCRB1Q8TBF4 217 aaKnown RBP10.02□□□□□ -0.81
CPSF7-224ENST00000544990 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.81
CPSF7-224ENST00000544990 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
CPSF7-224ENST00000544990 PER1O15534 1290 aaPredicted RBP10.01□□□□□ -0.81
CPSF7-224ENST00000544990 EZH2Q15910 746 aaKnown RBP10.01□□□□□ -0.81
CPSF7-224ENST00000544990 USHBP1Q8N6Y0 703 aa10.01□□□□□ -0.81
CPSF7-224ENST00000544990 CAMKK2Q96RR4 588 aa10.01□□□□□ -0.81
CPSF7-224ENST00000544990 SPDYE16A6NNV3 312 aaPredicted RBP10□□□□□ -0.81
CPSF7-224ENST00000544990 PLSCR1O15162 318 aa10□□□□□ -0.81
CPSF7-224ENST00000544990 PLPP6Q8IY26 295 aa10□□□□□ -0.81
CPSF7-224ENST00000544990 C2orf72A6NCS6 295 aa9.99□□□□□ -0.81
CPSF7-224ENST00000544990 CC2D1BQ5T0F9 858 aaKnown RBP9.99□□□□□ -0.81
CPSF7-224ENST00000544990 EYA1Q99502 592 aa9.99□□□□□ -0.81
CPSF7-224ENST00000544990 MEGF6O75095 1541 aa9.98□□□□□ -0.81
CPSF7-224ENST00000544990 EIF4A2Q14240 407 aaKnown RBP9.98□□□□□ -0.81
CPSF7-224ENST00000544990 NBPF14Q5TI25 921 aa9.98□□□□□ -0.81
CPSF7-224ENST00000544990 ACSBG1Q96GR2 724 aa9.98□□□□□ -0.81
CPSF7-224ENST00000544990 NPC1L1Q9UHC9 1359 aa9.98□□□□□ -0.81
CPSF7-224ENST00000544990 RGPD3A6NKT7 1758 aaPredicted RBP9.98□□□□□ -0.81
CPSF7-224ENST00000544990 RGPD4Q7Z3J3 1758 aa9.98□□□□□ -0.81
CPSF7-224ENST00000544990 NHSQ6T4R5 1651 aa9.97□□□□□ -0.81
CPSF7-224ENST00000544990 SRCAPQ6ZRS2 3230 aa9.97□□□□□ -0.81
CPSF7-224ENST00000544990 DPYSL4O14531 572 aa9.97□□□□□ -0.81
CPSF7-224ENST00000544990 KCNQ2O43526 872 aa9.97□□□□□ -0.81
CPSF7-224ENST00000544990 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
CPSF7-224ENST00000544990 SPG7Q9UQ90 795 aa9.97□□□□□ -0.81
CPSF7-224ENST00000544990 PCDH11XQ9BZA7 1347 aa9.97□□□□□ -0.81
CPSF7-224ENST00000544990 PCDH11YQ9BZA8 1340 aa9.97□□□□□ -0.81
CPSF7-224ENST00000544990 RREB1Q92766 1687 aa9.96□□□□□ -0.81
CPSF7-224ENST00000544990 ZEB1P37275 1124 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-224ENST00000544990 MTHFSP49914 203 aa9.96□□□□□ -0.82
CPSF7-224ENST00000544990 MAP3K9P80192 1104 aa9.96□□□□□ -0.82
CPSF7-224ENST00000544990 CNGB1Q14028 1251 aaPredicted RBP9.96□□□□□ -0.82
CPSF7-224ENST00000544990 PTF1AQ7RTS3 328 aa9.96□□□□□ -0.82
CPSF7-224ENST00000544990 NCAPD2Q15021 1401 aa9.96□□□□□ -0.82
CPSF7-224ENST00000544990 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.82
CPSF7-224ENST00000544990 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
CPSF7-224ENST00000544990 SYTL4Q96C24 671 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-224ENST00000544990 COLQQ9Y215 455 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-224ENST00000544990 IGSF1Q8N6C5 1336 aa9.95□□□□□ -0.82
CPSF7-224ENST00000544990 BTAF1O14981 1849 aa9.95□□□□□ -0.82
CPSF7-224ENST00000544990 NUP188Q5SRE5 1749 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms