RNA–Protein interactions for RNA: ENST00000544675.1

NDUFA9-208, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 4

Gene NDUFA9, Length 857 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-208ENST00000544675 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
NDUFA9-208ENST00000544675 SLC4A9Q96Q91 983 aa9.48□□□□□ -0.89
NDUFA9-208ENST00000544675 UCN2Q96RP3 112 aa9.48□□□□□ -0.89
NDUFA9-208ENST00000544675 ATP9BO43861 1147 aa9.47□□□□□ -0.89
NDUFA9-208ENST00000544675 GTF2E1P29083 439 aaPredicted RBP9.47□□□□□ -0.89
NDUFA9-208ENST00000544675 NCOA4Q13772 614 aa9.47□□□□□ -0.89
NDUFA9-208ENST00000544675 TRIM22Q8IYM9 498 aa9.47□□□□□ -0.89
NDUFA9-208ENST00000544675 TMEM229AB2RXF0 380 aa9.46□□□□□ -0.9
NDUFA9-208ENST00000544675 H7C1W4 665 aa9.46□□□□□ -0.9
NDUFA9-208ENST00000544675 GNASQ5JWF2 1037 aa9.46□□□□□ -0.9
NDUFA9-208ENST00000544675 TRIM50Q86XT4 487 aa9.46□□□□□ -0.9
NDUFA9-208ENST00000544675 VWA5B2Q8N398 1253 aa9.46□□□□□ -0.9
NDUFA9-208ENST00000544675 RHBDD1Q8TEB9 315 aa9.46□□□□□ -0.9
NDUFA9-208ENST00000544675 TIMMDC1Q9NPL8 285 aa9.46□□□□□ -0.9
NDUFA9-208ENST00000544675 A0A1B0GTH6 734 aa9.45□□□□□ -0.9
NDUFA9-208ENST00000544675 MTFR1Q15390 333 aa9.45□□□□□ -0.9
NDUFA9-208ENST00000544675 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
NDUFA9-208ENST00000544675 GLMNQ92990 594 aa9.45□□□□□ -0.9
NDUFA9-208ENST00000544675 CUEDC1Q9NWM3 386 aaPredicted RBP9.45□□□□□ -0.9
NDUFA9-208ENST00000544675 NACADO15069 1562 aa9.45□□□□□ -0.9
NDUFA9-208ENST00000544675 USP17L3A6NCW0 530 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 USP17L4A6NCW7 530 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 F11P03951 625 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 SMTNP53814 917 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 GTF2IP78347 998 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 TLR1Q15399 786 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 TMEM214Q6NUQ4 689 aaKnown RBP9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 TBC1D9Q6ZT07 1266 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 USP17L1Q7RTZ2 530 aa9.44□□□□□ -0.9
NDUFA9-208ENST00000544675 KRT76Q01546 638 aa9.43□□□□□ -0.9
NDUFA9-208ENST00000544675 LBRQ14739 615 aaKnown RBP9.43□□□□□ -0.9
NDUFA9-208ENST00000544675 ZNF837Q96EG3 531 aaPredicted RBP9.43□□□□□ -0.9
NDUFA9-208ENST00000544675 COL25A1Q9BXS0 654 aaPredicted RBP9.43□□□□□ -0.9
NDUFA9-208ENST00000544675 CDC14CA4D256 554 aa9.42□□□□□ -0.9
NDUFA9-208ENST00000544675 FAM181BA6NEQ2 426 aa9.42□□□□□ -0.9
NDUFA9-208ENST00000544675 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
NDUFA9-208ENST00000544675 BACH1O14867 736 aa9.42□□□□□ -0.9
NDUFA9-208ENST00000544675 STAU1O95793 577 aaKnown RBP9.42□□□□□ -0.9
NDUFA9-208ENST00000544675 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
NDUFA9-208ENST00000544675 DBN1Q16643 649 aa9.42□□□□□ -0.9
NDUFA9-208ENST00000544675 C4orf17Q53FE4 359 aa9.42□□□□□ -0.9
NDUFA9-208ENST00000544675 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
NDUFA9-208ENST00000544675 C1orf216Q8TAB5 229 aa9.41□□□□□ -0.9
NDUFA9-208ENST00000544675 IQSEC3Q9UPP2 1182 aaPredicted RBP9.41□□□□□ -0.9
NDUFA9-208ENST00000544675 EIF4G1Q04637 1599 aaKnown RBP9.41□□□□□ -0.9
NDUFA9-208ENST00000544675 A6NJY4 79 aa9.4□□□□□ -0.9
NDUFA9-208ENST00000544675 SLURP2P0DP57 97 aa9.4□□□□□ -0.9
NDUFA9-208ENST00000544675 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
NDUFA9-208ENST00000544675 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
NDUFA9-208ENST00000544675 NIFKQ9BYG3 293 aaKnown RBP9.4□□□□□ -0.9
NDUFA9-208ENST00000544675 ZBTB7BO15156 539 aaPredicted RBP9.39□□□□□ -0.91
NDUFA9-208ENST00000544675 RNFT1Q5M7Z0 435 aa9.39□□□□□ -0.91
NDUFA9-208ENST00000544675 RIPOR1Q6ZS17 1223 aa9.39□□□□□ -0.91
NDUFA9-208ENST00000544675 LARGE2Q8N3Y3 721 aa9.39□□□□□ -0.91
NDUFA9-208ENST00000544675 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
NDUFA9-208ENST00000544675 CNTNAP3BQ96NU0 1288 aa9.39□□□□□ -0.91
NDUFA9-208ENST00000544675 GAS2L1Q99501 681 aaPredicted RBP9.39□□□□□ -0.91
NDUFA9-208ENST00000544675 CNTNAP3Q9BZ76 1288 aa9.39□□□□□ -0.91
NDUFA9-208ENST00000544675 M0R2N6 131 aa9.38□□□□□ -0.91
NDUFA9-208ENST00000544675 CRISPLD1Q9H336 500 aa9.38□□□□□ -0.91
NDUFA9-208ENST00000544675 ZNF358Q9NW07 568 aa9.38□□□□□ -0.91
NDUFA9-208ENST00000544675 MAFBQ9Y5Q3 323 aaPredicted RBP9.38□□□□□ -0.91
NDUFA9-208ENST00000544675 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 EPHA4P54764 986 aa9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 SRSF11Q05519 484 aaKnown RBP9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 GAS6Q14393 721 aa9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 SIX5Q8N196 739 aa9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 PPP1R12CQ9BZL4 782 aa9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 NUCKS1Q9H1E3 243 aaKnown RBP9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 SCHIP1Q9P0W5 487 aaPredicted RBP9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 TFIP11Q9UBB9 837 aaKnown RBP9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 MKRN1Q9UHC7 482 aaKnown RBP9.37□□□□□ -0.91
NDUFA9-208ENST00000544675 MSX1P28360 303 aa9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 PHKA2P46019 1235 aa9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 CLDN10P78369 228 aa9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 FOXK2Q01167 660 aa9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 PSME1Q06323 249 aa9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 CFHR5Q9BXR6 569 aa9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 DNAAF2Q9NVR5 837 aaKnown RBP9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 ZDHHC3Q9NYG2 299 aa9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 SERTAD1Q9UHV2 236 aa9.36□□□□□ -0.91
NDUFA9-208ENST00000544675 CCDC102BQ68D86 513 aa9.35□□□□□ -0.91
NDUFA9-208ENST00000544675 OGFOD1Q8N543 542 aa9.35□□□□□ -0.91
NDUFA9-208ENST00000544675 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
NDUFA9-208ENST00000544675 TRERF1Q96PN7 1200 aa9.35□□□□□ -0.91
NDUFA9-208ENST00000544675 MBIPQ9NS73 344 aa9.35□□□□□ -0.91
NDUFA9-208ENST00000544675 ERCC6Q03468 1493 aa9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 DKK1O94907 266 aa9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 THBS1P07996 1170 aa9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 UBAP2LQ14157 1087 aaKnown RBP9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 PGBD3Q8N328 593 aa9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 TPCN2Q8NHX9 752 aa9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 KIAA1024Q9UPX6 916 aa9.34□□□□□ -0.91
NDUFA9-208ENST00000544675 PLA2G4AP47712 749 aa9.33□□□□□ -0.92
NDUFA9-208ENST00000544675 EFHC2Q5JST6 749 aa9.33□□□□□ -0.92
NDUFA9-208ENST00000544675 ATP4AP20648 1035 aa9.32□□□□□ -0.92
NDUFA9-208ENST00000544675 TEAD4Q15561 434 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms