RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 CAVIN4Q5BKX8 364 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 FERMT1Q9BQL6 677 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 CTNNA3Q9UI47 895 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 PRC1O43663 620 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 ZNF444Q8N0Y2 327 aaPredicted RBP9.45□□□□□ -0.9
ABCA13-207ENST00000544596 PDRG1Q9NUG6 133 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
ABCA13-207ENST00000544596 CAMK4Q16566 473 aa9.44□□□□□ -0.9
ABCA13-207ENST00000544596 SLC4A8Q2Y0W8 1093 aa9.44□□□□□ -0.9
ABCA13-207ENST00000544596 RANBP6O60518 1105 aaKnown RBP9.44□□□□□ -0.9
ABCA13-207ENST00000544596 BICD1Q96G01 975 aa9.44□□□□□ -0.9
ABCA13-207ENST00000544596 SMTNL1A8MU46 457 aa9.44□□□□□ -0.9
ABCA13-207ENST00000544596 HLTFQ14527 1009 aaKnown RBP eCLIP9.44□□□□□ -0.9
ABCA13-207ENST00000544596 RFX1P22670 979 aa9.44□□□□□ -0.9
ABCA13-207ENST00000544596 SYCP3Q8IZU3 236 aa9.44□□□□□ -0.9
ABCA13-207ENST00000544596 SRCIN1Q9C0H9 1055 aa9.44□□□□□ -0.9
ABCA13-207ENST00000544596 SYNCQ9H7C4 482 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 ACTN2P35609 894 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 PSMC4P43686 418 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 CPLX3Q8WVH0 158 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 UBXN4Q92575 508 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 EHMT1Q9H9B1 1298 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 VAT1LQ9HCJ6 419 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 CCDC175P0C221 793 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 RPGRQ92834 1020 aaKnown RBP9.43□□□□□ -0.9
ABCA13-207ENST00000544596 NUP62CLQ9H1M0 184 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 WDR33Q9C0J8 1336 aaKnown RBP9.43□□□□□ -0.9
ABCA13-207ENST00000544596 USP47Q96K76 1375 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 PTCD1O75127 700 aaKnown RBP9.43□□□□□ -0.9
ABCA13-207ENST00000544596 SULT6B1Q6IMI4 303 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 IL1RAPL2Q9NP60 686 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 IKBKGQ9Y6K9 419 aa9.43□□□□□ -0.9
ABCA13-207ENST00000544596 EXOSC9Q06265 439 aaKnown RBP9.42□□□□□ -0.9
ABCA13-207ENST00000544596 TMEM266Q2M3C6 531 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 CKAP2LQ8IYA6 745 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 JPH4Q96JJ6 628 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 BTBD11A6QL63 1104 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 SRGAP3O43295 1099 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 NOB1Q9ULX3 412 aaKnown RBP9.42□□□□□ -0.9
ABCA13-207ENST00000544596 BCAR3O75815 825 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 KIF4BQ2VIQ3 1234 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 C6orf229H3BNL8 230 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 SLU7O95391 586 aaKnown RBP9.42□□□□□ -0.9
ABCA13-207ENST00000544596 NOP2P46087 812 aaKnown RBP9.42□□□□□ -0.9
ABCA13-207ENST00000544596 CETN1Q12798 172 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 DPH6Q7L8W6 267 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 TAOK3Q9H2K8 898 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 RAD54L2Q9Y4B4 1467 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 TAF12Q16514 161 aa9.42□□□□□ -0.9
ABCA13-207ENST00000544596 NUP88Q99567 741 aaPredicted RBP9.42□□□□□ -0.9
ABCA13-207ENST00000544596 PRKRIP1Q9H875 184 aaPredicted RBP9.42□□□□□ -0.9
ABCA13-207ENST00000544596 C16orf71Q8IYS4 520 aaPredicted RBP9.41□□□□□ -0.9
ABCA13-207ENST00000544596 ZNF652Q9Y2D9 606 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 CASQ1P31415 396 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 UTP14AQ9BVJ6 771 aaKnown RBP9.41□□□□□ -0.9
ABCA13-207ENST00000544596 STARD3NLO95772 234 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 PRKCSHP14314 528 aaPredicted RBP9.41□□□□□ -0.9
ABCA13-207ENST00000544596 ZC3H6P61129 1189 aaKnown RBP9.41□□□□□ -0.9
ABCA13-207ENST00000544596 MXRA7P84157 204 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 RAB34Q9BZG1 259 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 CECR2Q9BXF3 1484 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 UQCRHP07919 91 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 GUCY1B3Q02153 619 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 UQCRHLA0A096LP55 91 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 PAFAH1B1P43034 410 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 NLRP5P59047 1200 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 KIF5CO60282 957 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 CTCFLQ8NI51 663 aaPredicted RBP9.41□□□□□ -0.9
ABCA13-207ENST00000544596 PDZRN3Q9UPQ7 1066 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 CFAP58Q5T655 872 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 IPO4Q8TEX9 1081 aaKnown RBP9.41□□□□□ -0.9
ABCA13-207ENST00000544596 LRRC45Q96CN5 670 aa9.41□□□□□ -0.9
ABCA13-207ENST00000544596 PAIP2Q9BPZ3 127 aaKnown RBP9.41□□□□□ -0.9
ABCA13-207ENST00000544596 BAG4O95429 457 aaKnown RBP9.4□□□□□ -0.9
ABCA13-207ENST00000544596 WWC3Q9ULE0 1092 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 TERF1P54274 439 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 C6orf163Q5TEZ5 329 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 TSR2Q969E8 191 aaKnown RBP9.4□□□□□ -0.9
ABCA13-207ENST00000544596 NAPBQ9H115 298 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 CCDC18Q5T9S5 1454 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 IDEP14735 1019 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 ZNF622Q969S3 477 aaKnown RBP eCLIP9.4□□□□□ -0.9
ABCA13-207ENST00000544596 SOGA1O94964 1423 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 CCDC160A6NGH7 325 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 CCDC40Q4G0X9 1142 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 FERMT3Q86UX7 667 aa9.4□□□□□ -0.9
ABCA13-207ENST00000544596 BIN2Q9UBW5 565 aaPredicted RBP9.4□□□□□ -0.9
ABCA13-207ENST00000544596 FGFR1OPO95684 399 aaKnown RBP9.4□□□□□ -0.91
ABCA13-207ENST00000544596 URI1O94763 535 aaPredicted RBP9.4□□□□□ -0.91
ABCA13-207ENST00000544596 IFIT1P09914 478 aaKnown RBP9.4□□□□□ -0.91
ABCA13-207ENST00000544596 CCT4P50991 539 aaKnown RBP9.4□□□□□ -0.91
ABCA13-207ENST00000544596 ZBED9Q6R2W3 1325 aa9.39□□□□□ -0.91
ABCA13-207ENST00000544596 MYO15BQ96JP2 1530 aa9.39□□□□□ -0.91
ABCA13-207ENST00000544596 USO1O60763 962 aaKnown RBP9.39□□□□□ -0.91
ABCA13-207ENST00000544596 ATP2C2O75185 946 aa9.39□□□□□ -0.91
ABCA13-207ENST00000544596 MAP9Q49MG5 647 aa9.39□□□□□ -0.91
ABCA13-207ENST00000544596 GBP3Q9H0R5 595 aa9.39□□□□□ -0.91
ABCA13-207ENST00000544596 A0A1W2PRG0 241 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms