RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 GNPATO15228 680 aa17.67■□□□□ 0.42
CIT-214ENST00000544588 PTCD1O75127 700 aaKnown RBP17.67■□□□□ 0.42
CIT-214ENST00000544588 MTHFSDQ2M296 383 aaKnown RBP17.67■□□□□ 0.42
CIT-214ENST00000544588 NUDCQ9Y266 331 aa17.67■□□□□ 0.42
CIT-214ENST00000544588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.66■□□□□ 0.42
CIT-214ENST00000544588 PPP2R1AP30153 589 aa17.66■□□□□ 0.42
CIT-214ENST00000544588 LGR6Q9HBX8 967 aa17.66■□□□□ 0.42
CIT-214ENST00000544588 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
CIT-214ENST00000544588 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.42
CIT-214ENST00000544588 RNMTO43148 476 aaKnown RBP17.64■□□□□ 0.41
CIT-214ENST00000544588 AMIGO3Q86WK7 504 aa17.64■□□□□ 0.41
CIT-214ENST00000544588 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
CIT-214ENST00000544588 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
CIT-214ENST00000544588 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
CIT-214ENST00000544588 PKD1L3Q7Z443 1732 aa17.63■□□□□ 0.41
CIT-214ENST00000544588 CASZ1Q86V15 1759 aa17.62■□□□□ 0.41
CIT-214ENST00000544588 SSFA2P28290 1259 aa17.62■□□□□ 0.41
CIT-214ENST00000544588 PELP1Q8IZL8 1130 aaKnown RBP17.62■□□□□ 0.41
CIT-214ENST00000544588 SLC52A2Q9HAB3 445 aa17.62■□□□□ 0.41
CIT-214ENST00000544588 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
CIT-214ENST00000544588 PRKAR2BP31323 418 aa17.61■□□□□ 0.41
CIT-214ENST00000544588 TRAPPC3LQ5T215 181 aa17.61■□□□□ 0.41
CIT-214ENST00000544588 GAS2L2Q8NHY3 880 aa17.61■□□□□ 0.41
CIT-214ENST00000544588 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
CIT-214ENST00000544588 YY1P25490 414 aa17.59■□□□□ 0.41
CIT-214ENST00000544588 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
CIT-214ENST00000544588 GPR162Q16538 588 aa17.59■□□□□ 0.41
CIT-214ENST00000544588 GNAT3A8MTJ3 354 aa17.58■□□□□ 0.4
CIT-214ENST00000544588 TOGARAM1Q9Y4F4 1720 aa17.58■□□□□ 0.4
CIT-214ENST00000544588 TEFQ10587 303 aa17.57■□□□□ 0.4
CIT-214ENST00000544588 RC3H1Q5TC82 1133 aaKnown RBP17.57■□□□□ 0.4
CIT-214ENST00000544588 NLGN2Q8NFZ4 835 aa17.57■□□□□ 0.4
CIT-214ENST00000544588 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
CIT-214ENST00000544588 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
CIT-214ENST00000544588 RPS6KA4O75676 772 aa17.56■□□□□ 0.4
CIT-214ENST00000544588 RFC4P35249 363 aa17.56■□□□□ 0.4
CIT-214ENST00000544588 TTC5Q8N0Z6 440 aa17.56■□□□□ 0.4
CIT-214ENST00000544588 LY75O60449 1722 aa17.55■□□□□ 0.4
CIT-214ENST00000544588 CRKLP46109 303 aaKnown RBP17.55■□□□□ 0.4
CIT-214ENST00000544588 DNAJC10Q8IXB1 793 aa17.55■□□□□ 0.4
CIT-214ENST00000544588 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
CIT-214ENST00000544588 ARHGEF1Q92888 912 aaKnown RBP17.55■□□□□ 0.4
CIT-214ENST00000544588 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
CIT-214ENST00000544588 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
CIT-214ENST00000544588 FCHSD2O94868 740 aa17.54■□□□□ 0.4
CIT-214ENST00000544588 NEFMP07197 916 aa17.54■□□□□ 0.4
CIT-214ENST00000544588 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
CIT-214ENST00000544588 MAP3K5Q99683 1374 aa17.53■□□□□ 0.4
CIT-214ENST00000544588 ADRA2BP18089 450 aa17.53■□□□□ 0.4
CIT-214ENST00000544588 MMP10P09238 476 aa17.52■□□□□ 0.4
CIT-214ENST00000544588 NLGN1Q8N2Q7 840 aa17.52■□□□□ 0.4
CIT-214ENST00000544588 C4BP0C0L5 1744 aa17.51■□□□□ 0.39
CIT-214ENST00000544588 CD2APQ9Y5K6 639 aa17.51■□□□□ 0.39
CIT-214ENST00000544588 ITGB4P16144 1822 aa17.5■□□□□ 0.39
CIT-214ENST00000544588 RALBP1Q15311 655 aa17.5■□□□□ 0.39
CIT-214ENST00000544588 INTS5Q6P9B9 1019 aaKnown RBP17.5■□□□□ 0.39
CIT-214ENST00000544588 CCDC87Q9NVE4 849 aa17.5■□□□□ 0.39
CIT-214ENST00000544588 WWC3Q9ULE0 1092 aa17.5■□□□□ 0.39
CIT-214ENST00000544588 BTBD11A6QL63 1104 aa17.49■□□□□ 0.39
CIT-214ENST00000544588 MCM10Q7L590 875 aa17.49■□□□□ 0.39
CIT-214ENST00000544588 SRP68Q9UHB9 627 aaKnown RBP17.49■□□□□ 0.39
CIT-214ENST00000544588 C5P01031 1676 aa17.48■□□□□ 0.39
CIT-214ENST00000544588 ZPR1O75312 459 aa17.48■□□□□ 0.39
CIT-214ENST00000544588 STARD3NLO95772 234 aa17.48■□□□□ 0.39
CIT-214ENST00000544588 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
CIT-214ENST00000544588 GYS1P13807 737 aa17.48■□□□□ 0.39
CIT-214ENST00000544588 DCTN1Q14203 1278 aa17.48■□□□□ 0.39
CIT-214ENST00000544588 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
CIT-214ENST00000544588 PARP3Q9Y6F1 533 aa17.48■□□□□ 0.39
CIT-214ENST00000544588 CANXP27824 592 aaKnown RBP17.47■□□□□ 0.39
CIT-214ENST00000544588 VSIG10Q8N0Z9 540 aa17.47■□□□□ 0.39
CIT-214ENST00000544588 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
CIT-214ENST00000544588 UTRNP46939 3433 aa17.47■□□□□ 0.39
CIT-214ENST00000544588 FMNL2Q96PY5 1086 aa17.46■□□□□ 0.39
CIT-214ENST00000544588 PNNQ9H307 717 aaKnown RBP17.46■□□□□ 0.39
CIT-214ENST00000544588 ZNF330Q9Y3S2 320 aaPredicted RBP17.46■□□□□ 0.39
CIT-214ENST00000544588 KCNQ3O43525 872 aa17.45■□□□□ 0.38
CIT-214ENST00000544588 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
CIT-214ENST00000544588 ZEB1P37275 1124 aaPredicted RBP17.45■□□□□ 0.38
CIT-214ENST00000544588 ZBTB1Q9Y2K1 713 aa17.45■□□□□ 0.38
CIT-214ENST00000544588 YBX3P16989 372 aaKnown RBP eCLIP17.44■□□□□ 0.38
CIT-214ENST00000544588 FKBP8Q14318 412 aa17.44■□□□□ 0.38
CIT-214ENST00000544588 USPL1Q5W0Q7 1092 aa17.44■□□□□ 0.38
CIT-214ENST00000544588 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
CIT-214ENST00000544588 TEX13AQ9BXU3 409 aaPredicted RBP17.44■□□□□ 0.38
CIT-214ENST00000544588 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
CIT-214ENST00000544588 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
CIT-214ENST00000544588 SOS1Q07889 1333 aaPredicted RBP17.43■□□□□ 0.38
CIT-214ENST00000544588 USP42Q9H9J4 1324 aaKnown RBP17.43■□□□□ 0.38
CIT-214ENST00000544588 QSER1Q2KHR3 1735 aa17.42■□□□□ 0.38
CIT-214ENST00000544588 CEMIPQ8WUJ3 1361 aa17.41■□□□□ 0.38
CIT-214ENST00000544588 HEG1Q9ULI3 1381 aa17.41■□□□□ 0.38
CIT-214ENST00000544588 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
CIT-214ENST00000544588 MIS18AQ9NYP9 233 aa17.41■□□□□ 0.38
CIT-214ENST00000544588 TUBGCP6Q96RT7 1819 aa17.41■□□□□ 0.38
CIT-214ENST00000544588 MRC1P22897 1456 aa17.41■□□□□ 0.38
CIT-214ENST00000544588 A0A0G2JLW4 131 aa17.4■□□□□ 0.38
CIT-214ENST00000544588 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
CIT-214ENST00000544588 PLEKHF1Q96S99 279 aa17.4■□□□□ 0.38
CIT-214ENST00000544588 NARFQ9UHQ1 456 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms