RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 SEPT12Q8IYM1 358 aa10.42□□□□□ -0.74
DDX47-211ENST00000544497 PCDHB9Q9Y5E1 797 aa10.42□□□□□ -0.74
DDX47-211ENST00000544497 KANK3Q6NY19 840 aa10.41□□□□□ -0.74
DDX47-211ENST00000544497 CUEDC1Q9NWM3 386 aaPredicted RBP10.41□□□□□ -0.74
DDX47-211ENST00000544497 USTQ9Y2C2 406 aa10.41□□□□□ -0.74
DDX47-211ENST00000544497 SKIP12755 728 aa10.4□□□□□ -0.74
DDX47-211ENST00000544497 GAS6Q14393 721 aa10.4□□□□□ -0.74
DDX47-211ENST00000544497 LYPD4Q6UWN0 246 aa10.4□□□□□ -0.74
DDX47-211ENST00000544497 ZNF592Q92610 1267 aa10.4□□□□□ -0.74
DDX47-211ENST00000544497 TRIM52Q96A61 297 aa10.4□□□□□ -0.74
DDX47-211ENST00000544497 SCARF2Q96GP6 870 aaPredicted RBP10.4□□□□□ -0.74
DDX47-211ENST00000544497 CYLDQ9NQC7 956 aa10.4□□□□□ -0.74
DDX47-211ENST00000544497 RNF144AP50876 292 aaPredicted RBP10.39□□□□□ -0.75
DDX47-211ENST00000544497 MAP3K10Q02779 954 aa10.39□□□□□ -0.75
DDX47-211ENST00000544497 VRTNQ9H8Y1 702 aa10.39□□□□□ -0.75
DDX47-211ENST00000544497 SLFNL1Q499Z3 407 aa10.38□□□□□ -0.75
DDX47-211ENST00000544497 NFATC2IPQ8NCF5 419 aa10.38□□□□□ -0.75
DDX47-211ENST00000544497 ATG7O95352 703 aa10.37□□□□□ -0.75
DDX47-211ENST00000544497 GPAT2Q6NUI2 795 aa10.37□□□□□ -0.75
DDX47-211ENST00000544497 PRICKLE2Q7Z3G6 844 aa10.37□□□□□ -0.75
DDX47-211ENST00000544497 CCDC9Q9Y3X0 531 aaKnown RBP10.37□□□□□ -0.75
DDX47-211ENST00000544497 CARNS1A5YM72 827 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 USP17L3A6NCW0 530 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 USP17L4A6NCW7 530 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 USP17L5A8MUK1 530 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 IGHA1P01876 353 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 CELA2BP08218 269 aaPredicted RBP10.36□□□□□ -0.75
DDX47-211ENST00000544497 RHOQP17081 205 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 USP17L2Q6R6M4 530 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 USP17L1Q7RTZ2 530 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 ZNF837Q96EG3 531 aaPredicted RBP10.36□□□□□ -0.75
DDX47-211ENST00000544497 GMCL1Q96IK5 515 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
DDX47-211ENST00000544497 ATP5J2-PTCD1G3V325 749 aa10.35□□□□□ -0.75
DDX47-211ENST00000544497 MCCD1P59942 119 aaPredicted RBP10.35□□□□□ -0.75
DDX47-211ENST00000544497 FOXK2Q01167 660 aa10.35□□□□□ -0.75
DDX47-211ENST00000544497 RNF135Q8IUD6 432 aa10.35□□□□□ -0.75
DDX47-211ENST00000544497 TRIM22Q8IYM9 498 aa10.35□□□□□ -0.75
DDX47-211ENST00000544497 DEPDC4Q8N2C3 294 aa10.35□□□□□ -0.75
DDX47-211ENST00000544497 CUX2O14529 1486 aa10.35□□□□□ -0.75
DDX47-211ENST00000544497 GPC1P35052 558 aa10.34□□□□□ -0.75
DDX47-211ENST00000544497 MBIPQ9NS73 344 aa10.34□□□□□ -0.75
DDX47-211ENST00000544497 KANK4Q5T7N3 995 aaPredicted RBP10.33□□□□□ -0.76
DDX47-211ENST00000544497 ENAMQ9NRM1 1142 aa10.33□□□□□ -0.76
DDX47-211ENST00000544497 GIGYF1O75420 1035 aaPredicted RBP10.32□□□□□ -0.76
DDX47-211ENST00000544497 FOXR1Q6PIV2 292 aa10.32□□□□□ -0.76
DDX47-211ENST00000544497 CCDC125Q86Z20 511 aa10.32□□□□□ -0.76
DDX47-211ENST00000544497 PLEKHM2Q8IWE5 1019 aa10.32□□□□□ -0.76
DDX47-211ENST00000544497 ZCCHC6Q5VYS8 1495 aaKnown RBP10.31□□□□□ -0.76
DDX47-211ENST00000544497 PATL2C9JE40 543 aaKnown RBP10.31□□□□□ -0.76
DDX47-211ENST00000544497 MEN1O00255 615 aa10.31□□□□□ -0.76
DDX47-211ENST00000544497 BRD1O95696 1058 aa10.31□□□□□ -0.76
DDX47-211ENST00000544497 PLPP7Q8NBV4 271 aa10.31□□□□□ -0.76
DDX47-211ENST00000544497 GZF1Q9H116 711 aaPredicted RBP10.31□□□□□ -0.76
DDX47-211ENST00000544497 IGF1RP08069 1367 aa10.3□□□□□ -0.76
DDX47-211ENST00000544497 DCAF1Q9Y4B6 1507 aa10.3□□□□□ -0.76
DDX47-211ENST00000544497 GPR25O00155 361 aa10.3□□□□□ -0.76
DDX47-211ENST00000544497 NCOA4Q13772 614 aa10.3□□□□□ -0.76
DDX47-211ENST00000544497 DBN1Q16643 649 aa10.3□□□□□ -0.76
DDX47-211ENST00000544497 RIPOR1Q6ZS17 1223 aa10.3□□□□□ -0.76
DDX47-211ENST00000544497 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
DDX47-211ENST00000544497 DYRK1BQ9Y463 629 aa10.3□□□□□ -0.76
DDX47-211ENST00000544497 A0A1W2PRU2 124 aa10.29□□□□□ -0.76
DDX47-211ENST00000544497 ERVK-9P63128 1117 aa10.29□□□□□ -0.76
DDX47-211ENST00000544497 CC2D2BQ6DHV5 1058 aa10.29□□□□□ -0.76
DDX47-211ENST00000544497 NOVA2Q9UNW9 492 aaKnown RBP10.29□□□□□ -0.76
DDX47-211ENST00000544497 TMEM88BA6NKF7 163 aa10.28□□□□□ -0.76
DDX47-211ENST00000544497 H7C1W4 665 aa10.28□□□□□ -0.76
DDX47-211ENST00000544497 KCNA1Q09470 495 aa10.28□□□□□ -0.76
DDX47-211ENST00000544497 LARP1Q6PKG0 1096 aaKnown RBP10.28□□□□□ -0.76
DDX47-211ENST00000544497 PHF20L1A8MW92 1017 aa10.27□□□□□ -0.77
DDX47-211ENST00000544497 RASA1P20936 1047 aa10.27□□□□□ -0.77
DDX47-211ENST00000544497 ELOAQ14241 798 aaKnown RBP10.27□□□□□ -0.77
DDX47-211ENST00000544497 EML3Q32P44 896 aa10.27□□□□□ -0.77
DDX47-211ENST00000544497 PHTF2Q8N3S3 785 aa10.27□□□□□ -0.77
DDX47-211ENST00000544497 USP17L15C9J2P7 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L10C9JJH3 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L13C9JLJ4 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L12C9JPN9 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L11C9JVI0 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L21D6R901 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L18D6R9N7 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L22D6RA61 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L17D6RBQ6 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L19D6RCP7 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L20D6RJB6 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 BCRP11274 1271 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 USP17L24Q0WX57 530 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 POU4F2Q12837 409 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 MAP7D1Q3KQU3 841 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 SLC27A3Q5K4L6 730 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 TMCO4Q5TGY1 634 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 RNF20Q5VTR2 975 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 STK32AQ8WU08 396 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 GTPBP3Q969Y2 492 aaKnown RBP10.26□□□□□ -0.77
DDX47-211ENST00000544497 NLRP3Q96P20 1036 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 ZMIZ1Q9ULJ6 1067 aa10.26□□□□□ -0.77
DDX47-211ENST00000544497 FAM196BA6NMK8 535 aa10.25□□□□□ -0.77
DDX47-211ENST00000544497 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
DDX47-211ENST00000544497 CRTC2Q53ET0 693 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms