RNA–Protein interactions for RNA: ENST00000544489.5

LRTM2-209, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 5

Gene LRTM2, Length 638 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-209ENST00000544489 LINC00116Q8NCU8 138 aa22.17■■□□□ 1.14
LRTM2-209ENST00000544489 ITGB4P16144 1822 aa22.16■■□□□ 1.14
LRTM2-209ENST00000544489 TATP17735 454 aaPredicted RBP22.16■■□□□ 1.14
LRTM2-209ENST00000544489 MAP2P11137 1827 aaKnown RBP22.15■■□□□ 1.14
LRTM2-209ENST00000544489 CYP27B1O15528 508 aa22.15■■□□□ 1.14
LRTM2-209ENST00000544489 RTL1A6NKG5 1358 aa22.14■■□□□ 1.14
LRTM2-209ENST00000544489 C9orf131Q5VYM1 1079 aa22.14■■□□□ 1.13
LRTM2-209ENST00000544489 PIGBQ92521 554 aa22.14■■□□□ 1.13
LRTM2-209ENST00000544489 PANK3Q9H999 370 aa22.14■■□□□ 1.13
LRTM2-209ENST00000544489 KIF20BQ96Q89 1820 aa22.14■■□□□ 1.13
LRTM2-209ENST00000544489 C10orf71Q711Q0 1435 aa22.13■■□□□ 1.13
LRTM2-209ENST00000544489 PLEKHG2Q9H7P9 1386 aa22.12■■□□□ 1.13
LRTM2-209ENST00000544489 KIF7Q2M1P5 1343 aa22.12■■□□□ 1.13
LRTM2-209ENST00000544489 LOC102724428A0A0B4J2F2 783 aa22.12■■□□□ 1.13
LRTM2-209ENST00000544489 DPEP1P16444 411 aa22.12■■□□□ 1.13
LRTM2-209ENST00000544489 SIK1P57059 783 aa22.12■■□□□ 1.13
LRTM2-209ENST00000544489 KCPQ6ZWJ8 1503 aa22.11■■□□□ 1.13
LRTM2-209ENST00000544489 GNPATO15228 680 aa22.11■■□□□ 1.13
LRTM2-209ENST00000544489 FCHSD2O94868 740 aa22.11■■□□□ 1.13
LRTM2-209ENST00000544489 BRCA1P38398 1863 aaKnown RBP22.1■■□□□ 1.13
LRTM2-209ENST00000544489 ITPK1Q13572 414 aa22.1■■□□□ 1.13
LRTM2-209ENST00000544489 RRS1Q15050 365 aaKnown RBP22.1■■□□□ 1.13
LRTM2-209ENST00000544489 HSPA1AP0DMV8 641 aaKnown RBP22.09■■□□□ 1.13
LRTM2-209ENST00000544489 HSPA1BP0DMV9 641 aaKnown RBP22.09■■□□□ 1.13
LRTM2-209ENST00000544489 RRAGCQ9HB90 399 aa22.09■■□□□ 1.13
LRTM2-209ENST00000544489 PKD1L3Q7Z443 1732 aa22.09■■□□□ 1.13
LRTM2-209ENST00000544489 KDM2BQ8NHM5 1336 aa22.08■■□□□ 1.13
LRTM2-209ENST00000544489 SMG6Q86US8 1419 aaKnown RBP22.08■■□□□ 1.13
LRTM2-209ENST00000544489 ARFGEF1Q9Y6D6 1849 aa22.06■■□□□ 1.12
LRTM2-209ENST00000544489 KCNA3P22001 575 aa22.06■■□□□ 1.12
LRTM2-209ENST00000544489 NLGN1Q8N2Q7 840 aa22.06■■□□□ 1.12
LRTM2-209ENST00000544489 SMC1BQ8NDV3 1235 aa22.06■■□□□ 1.12
LRTM2-209ENST00000544489 NKX1-1Q15270 411 aaPredicted RBP22.05■■□□□ 1.12
LRTM2-209ENST00000544489 CCDC87Q9NVE4 849 aa22.05■■□□□ 1.12
LRTM2-209ENST00000544489 ATP6V1AP38606 617 aa22.04■■□□□ 1.12
LRTM2-209ENST00000544489 HSP90AB2PQ58FF8 381 aa22.04■■□□□ 1.12
LRTM2-209ENST00000544489 ASAP1Q9ULH1 1129 aa22.04■■□□□ 1.12
LRTM2-209ENST00000544489 TNRC6CQ9HCJ0 1690 aaKnown RBP22.04■■□□□ 1.12
LRTM2-209ENST00000544489 C4AP0C0L4 1744 aa22.03■■□□□ 1.12
LRTM2-209ENST00000544489 INSRP06213 1382 aa22.03■■□□□ 1.12
LRTM2-209ENST00000544489 SLC34A2O95436 690 aa22.03■■□□□ 1.12
LRTM2-209ENST00000544489 RNF181Q9P0P0 153 aa22.03■■□□□ 1.12
LRTM2-209ENST00000544489 TRAPPC3LQ5T215 181 aa22.02■■□□□ 1.12
LRTM2-209ENST00000544489 DCAF5Q96JK2 942 aa22.02■■□□□ 1.12
LRTM2-209ENST00000544489 KNSTRNQ9Y448 316 aa22.01■■□□□ 1.11
LRTM2-209ENST00000544489 WASHC2AQ641Q2 1341 aa22.01■■□□□ 1.11
LRTM2-209ENST00000544489 TMOD3Q9NYL9 352 aa22■■□□□ 1.11
LRTM2-209ENST00000544489 PIM2Q9P1W9 311 aa22■■□□□ 1.11
LRTM2-209ENST00000544489 RTCBQ9Y3I0 505 aaKnown RBP22■■□□□ 1.11
LRTM2-209ENST00000544489 GYS1P13807 737 aa21.99■■□□□ 1.11
LRTM2-209ENST00000544489 ARHGEF1Q92888 912 aaKnown RBP21.99■■□□□ 1.11
LRTM2-209ENST00000544489 EMILIN1Q9Y6C2 1016 aa21.99■■□□□ 1.11
LRTM2-209ENST00000544489 ANKRD26Q9UPS8 1709 aa21.99■■□□□ 1.11
LRTM2-209ENST00000544489 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
LRTM2-209ENST00000544489 SBF1O95248 1867 aa21.98■■□□□ 1.11
LRTM2-209ENST00000544489 DALRD3Q5D0E6 543 aaKnown RBP21.98■■□□□ 1.11
LRTM2-209ENST00000544489 ATG3Q9NT62 314 aa21.98■■□□□ 1.11
LRTM2-209ENST00000544489 PARP3Q9Y6F1 533 aa21.98■■□□□ 1.11
LRTM2-209ENST00000544489 FLT4P35916 1363 aa21.97■■□□□ 1.11
LRTM2-209ENST00000544489 PER1O15534 1290 aaPredicted RBP21.96■■□□□ 1.11
LRTM2-209ENST00000544489 TNNT2P45379 298 aaPredicted RBP21.96■■□□□ 1.11
LRTM2-209ENST00000544489 KDRP35968 1356 aa21.96■■□□□ 1.11
LRTM2-209ENST00000544489 PPM1GO15355 546 aaPredicted RBP21.95■■□□□ 1.1
LRTM2-209ENST00000544489 ADRA2BP18089 450 aa21.95■■□□□ 1.1
LRTM2-209ENST00000544489 SLC4A9Q96Q91 983 aa21.95■■□□□ 1.1
LRTM2-209ENST00000544489 POLKQ9UBT6 870 aa21.95■■□□□ 1.1
LRTM2-209ENST00000544489 SPG7Q9UQ90 795 aa21.95■■□□□ 1.1
LRTM2-209ENST00000544489 NCAPD2Q15021 1401 aa21.95■■□□□ 1.1
LRTM2-209ENST00000544489 AMER1Q5JTC6 1135 aaPredicted RBP21.94■■□□□ 1.1
LRTM2-209ENST00000544489 MORC1Q86VD1 984 aa21.94■■□□□ 1.1
LRTM2-209ENST00000544489 RFC4P35249 363 aa21.93■■□□□ 1.1
LRTM2-209ENST00000544489 RC3H1Q5TC82 1133 aaKnown RBP21.93■■□□□ 1.1
LRTM2-209ENST00000544489 ZC3H4Q9UPT8 1303 aaKnown RBP21.91■■□□□ 1.1
LRTM2-209ENST00000544489 RPS6KA4O75676 772 aa21.91■■□□□ 1.1
LRTM2-209ENST00000544489 VEGFAP15692 232 aaPredicted RBP21.91■■□□□ 1.1
LRTM2-209ENST00000544489 CNTNAP4Q9C0A0 1308 aa21.9■■□□□ 1.1
LRTM2-209ENST00000544489 CHRNA5P30532 468 aa21.9■■□□□ 1.1
LRTM2-209ENST00000544489 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.9■■□□□ 1.1
LRTM2-209ENST00000544489 KDM6AO15550 1401 aaPredicted RBP21.89■■□□□ 1.1
LRTM2-209ENST00000544489 COL5A3P25940 1745 aaPredicted RBP21.89■■□□□ 1.1
LRTM2-209ENST00000544489 ZNF831Q5JPB2 1677 aa21.89■■□□□ 1.1
LRTM2-209ENST00000544489 PHKG2P15735 406 aa21.89■■□□□ 1.09
LRTM2-209ENST00000544489 GLTPD2A6NH11 291 aa21.88■■□□□ 1.09
LRTM2-209ENST00000544489 RASSF7Q02833 373 aa21.88■■□□□ 1.09
LRTM2-209ENST00000544489 DDR1Q08345 913 aa21.88■■□□□ 1.09
LRTM2-209ENST00000544489 IFNL2Q8IZJ0 200 aa21.88■■□□□ 1.09
LRTM2-209ENST00000544489 MYH14Q7Z406 1995 aaKnown RBP21.88■■□□□ 1.09
LRTM2-209ENST00000544489 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
LRTM2-209ENST00000544489 FKBP8Q14318 412 aa21.85■■□□□ 1.09
LRTM2-209ENST00000544489 CC2D1BQ5T0F9 858 aaKnown RBP21.85■■□□□ 1.09
LRTM2-209ENST00000544489 SRP68Q9UHB9 627 aaKnown RBP21.85■■□□□ 1.09
LRTM2-209ENST00000544489 LMNB1P20700 586 aa21.84■■□□□ 1.09
LRTM2-209ENST00000544489 POTECB2RU33 542 aa21.83■■□□□ 1.09
LRTM2-209ENST00000544489 FOXN1O15353 648 aa21.83■■□□□ 1.09
LRTM2-209ENST00000544489 EYA1Q99502 592 aa21.83■■□□□ 1.09
LRTM2-209ENST00000544489 NPC1L1Q9UHC9 1359 aa21.83■■□□□ 1.08
LRTM2-209ENST00000544489 EIF4A2Q14240 407 aaKnown RBP21.82■■□□□ 1.08
LRTM2-209ENST00000544489 USP42Q9H9J4 1324 aaKnown RBP21.81■■□□□ 1.08
LRTM2-209ENST00000544489 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
LRTM2-209ENST00000544489 PRDM10Q9NQV6 1147 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms