RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
CHFR-223ENST00000544268 ROBO1Q9Y6N7 1651 aa18.75■□□□□ 0.59
CHFR-223ENST00000544268 CRB1P82279 1406 aa18.74■□□□□ 0.59
CHFR-223ENST00000544268 CAMTA1Q9Y6Y1 1673 aa18.73■□□□□ 0.59
CHFR-223ENST00000544268 GNAT3A8MTJ3 354 aa18.73■□□□□ 0.59
CHFR-223ENST00000544268 ALDH1L2Q3SY69 923 aa18.73■□□□□ 0.59
CHFR-223ENST00000544268 IPO8O15397 1037 aaKnown RBP18.73■□□□□ 0.59
CHFR-223ENST00000544268 ZBTB7BO15156 539 aaPredicted RBP18.72■□□□□ 0.59
CHFR-223ENST00000544268 MAP3K5Q99683 1374 aa18.72■□□□□ 0.59
CHFR-223ENST00000544268 CHL1O00533 1208 aa18.72■□□□□ 0.59
CHFR-223ENST00000544268 HAP1P54257 671 aaPredicted RBP18.72■□□□□ 0.59
CHFR-223ENST00000544268 TWISTNBQ3B726 338 aaPredicted RBP18.72■□□□□ 0.59
CHFR-223ENST00000544268 SIRT2Q8IXJ6 389 aa18.71■□□□□ 0.59
CHFR-223ENST00000544268 NLRP2Q9NX02 1062 aa18.71■□□□□ 0.59
CHFR-223ENST00000544268 ABCA3Q99758 1704 aa18.71■□□□□ 0.59
CHFR-223ENST00000544268 LMO7Q8WWI1 1683 aa18.71■□□□□ 0.59
CHFR-223ENST00000544268 ABCC6O95255 1503 aa18.71■□□□□ 0.59
CHFR-223ENST00000544268 HTATSF1O43719 755 aaKnown RBP18.71■□□□□ 0.59
CHFR-223ENST00000544268 UPF2Q9HAU5 1272 aaKnown RBP18.71■□□□□ 0.59
CHFR-223ENST00000544268 PRDM11Q9NQV5 511 aa18.71■□□□□ 0.59
CHFR-223ENST00000544268 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
CHFR-223ENST00000544268 NUCB1Q02818 461 aa18.7■□□□□ 0.58
CHFR-223ENST00000544268 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
CHFR-223ENST00000544268 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
CHFR-223ENST00000544268 ANTXR1Q9H6X2 564 aa18.69■□□□□ 0.58
CHFR-223ENST00000544268 C22orf23Q9BZE7 217 aa18.69■□□□□ 0.58
CHFR-223ENST00000544268 ANKRD45Q5TZF3 282 aa18.68■□□□□ 0.58
CHFR-223ENST00000544268 LRRC37A3O60309 1634 aa18.68■□□□□ 0.58
CHFR-223ENST00000544268 BECN1Q14457 450 aa18.68■□□□□ 0.58
CHFR-223ENST00000544268 PLEKHO1Q53GL0 409 aaPredicted RBP18.68■□□□□ 0.58
CHFR-223ENST00000544268 CHD1LQ86WJ1 897 aa18.68■□□□□ 0.58
CHFR-223ENST00000544268 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
CHFR-223ENST00000544268 ZNF530Q6P9A1 599 aaPredicted RBP18.67■□□□□ 0.58
CHFR-223ENST00000544268 KLHL34Q8N239 644 aa18.67■□□□□ 0.58
CHFR-223ENST00000544268 FAM208AQ9UK61 1670 aaKnown RBP18.67■□□□□ 0.58
CHFR-223ENST00000544268 XRCC6P12956 609 aaKnown RBP eCLIP18.66■□□□□ 0.58
CHFR-223ENST00000544268 AMOTQ4VCS5 1084 aa18.66■□□□□ 0.58
CHFR-223ENST00000544268 ZNF428Q96B54 188 aa18.65■□□□□ 0.58
CHFR-223ENST00000544268 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
CHFR-223ENST00000544268 FSD2A1L4K1 749 aa18.64■□□□□ 0.58
CHFR-223ENST00000544268 AKAP4Q5JQC9 854 aa18.64■□□□□ 0.58
CHFR-223ENST00000544268 RAPGEF4Q8WZA2 1011 aa18.64■□□□□ 0.58
CHFR-223ENST00000544268 LGR6Q9HBX8 967 aa18.64■□□□□ 0.58
CHFR-223ENST00000544268 GOLGA6L3A6NEY3 463 aa18.64■□□□□ 0.57
CHFR-223ENST00000544268 CEMIPQ8WUJ3 1361 aa18.63■□□□□ 0.57
CHFR-223ENST00000544268 ABCC4O15439 1325 aa18.63■□□□□ 0.57
CHFR-223ENST00000544268 BRPF1P55201 1214 aaPredicted RBP18.63■□□□□ 0.57
CHFR-223ENST00000544268 MEGF6O75095 1541 aa18.63■□□□□ 0.57
CHFR-223ENST00000544268 COL5A2P05997 1499 aaPredicted RBP18.62■□□□□ 0.57
CHFR-223ENST00000544268 MPRIPQ6WCQ1 1025 aa18.62■□□□□ 0.57
CHFR-223ENST00000544268 WDR17Q8IZU2 1322 aa18.62■□□□□ 0.57
CHFR-223ENST00000544268 PIP4K2BP78356 416 aa18.62■□□□□ 0.57
CHFR-223ENST00000544268 C1orf141Q5JVX7 400 aa18.62■□□□□ 0.57
CHFR-223ENST00000544268 TOM1O60784 492 aa18.61■□□□□ 0.57
CHFR-223ENST00000544268 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
CHFR-223ENST00000544268 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
CHFR-223ENST00000544268 TOM1L2Q6ZVM7 507 aa18.6■□□□□ 0.57
CHFR-223ENST00000544268 C16orf71Q8IYS4 520 aaPredicted RBP18.59■□□□□ 0.57
CHFR-223ENST00000544268 ARHGAP45Q92619 1136 aa18.59■□□□□ 0.57
CHFR-223ENST00000544268 PHLPP1O60346 1717 aa18.59■□□□□ 0.57
CHFR-223ENST00000544268 APBB1O00213 710 aa18.59■□□□□ 0.57
CHFR-223ENST00000544268 STRN4Q9NRL3 753 aa18.59■□□□□ 0.57
CHFR-223ENST00000544268 RNMTO43148 476 aaKnown RBP18.58■□□□□ 0.57
CHFR-223ENST00000544268 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.56
CHFR-223ENST00000544268 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
CHFR-223ENST00000544268 UBAP1LF5GYI3 381 aa18.58■□□□□ 0.56
CHFR-223ENST00000544268 LARP1Q6PKG0 1096 aaKnown RBP18.57■□□□□ 0.56
CHFR-223ENST00000544268 OTUD7AQ8TE49 926 aaPredicted RBP18.57■□□□□ 0.56
CHFR-223ENST00000544268 TAF7LQ5H9L4 462 aa18.57■□□□□ 0.56
CHFR-223ENST00000544268 CERKQ8TCT0 537 aa18.57■□□□□ 0.56
CHFR-223ENST00000544268 ARXQ96QS3 562 aa18.57■□□□□ 0.56
CHFR-223ENST00000544268 BABAM1Q9NWV8 329 aa18.57■□□□□ 0.56
CHFR-223ENST00000544268 CD2BP2O95400 341 aaKnown RBP18.56■□□□□ 0.56
CHFR-223ENST00000544268 EVA1CP58658 441 aa18.56■□□□□ 0.56
CHFR-223ENST00000544268 TEFQ10587 303 aa18.56■□□□□ 0.56
CHFR-223ENST00000544268 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
CHFR-223ENST00000544268 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.56■□□□□ 0.56
CHFR-223ENST00000544268 SPG7Q9UQ90 795 aa18.56■□□□□ 0.56
CHFR-223ENST00000544268 TBC1D9Q6ZT07 1266 aa18.55■□□□□ 0.56
CHFR-223ENST00000544268 PANK2Q9BZ23 570 aa18.55■□□□□ 0.56
CHFR-223ENST00000544268 BTG4Q9NY30 223 aa18.55■□□□□ 0.56
CHFR-223ENST00000544268 RGS12O14924 1447 aa18.55■□□□□ 0.56
CHFR-223ENST00000544268 GSPT1P15170 499 aaKnown RBP18.54■□□□□ 0.56
CHFR-223ENST00000544268 PHKG2P15735 406 aa18.54■□□□□ 0.56
CHFR-223ENST00000544268 G2E3Q7L622 706 aa18.54■□□□□ 0.56
CHFR-223ENST00000544268 SMARCA5O60264 1052 aaPredicted RBP18.54■□□□□ 0.56
CHFR-223ENST00000544268 CARD10Q9BWT7 1032 aa18.54■□□□□ 0.56
CHFR-223ENST00000544268 PDCL3Q9H2J4 239 aa18.54■□□□□ 0.56
CHFR-223ENST00000544268 FOXD4L1Q9NU39 408 aa18.54■□□□□ 0.56
CHFR-223ENST00000544268 OVOS2A0A0G2JMS6 1433 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 F6X3S4 739 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 MRE11P49959 708 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 BMP2KLQ5H9B9 411 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 GCC1Q96CN9 775 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 KIF2CQ99661 725 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 MEIS3Q99687 375 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 API5Q9BZZ5 524 aaKnown RBP18.53■□□□□ 0.56
CHFR-223ENST00000544268 PKD1L3Q7Z443 1732 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 CYP27B1O15528 508 aa18.53■□□□□ 0.56
CHFR-223ENST00000544268 TPM2P07951 284 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms