RNA–Protein interactions for RNA: ENST00000544244.5

PTPRO-210, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRO, Length 3,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-210ENST00000544244 NRKQ7Z2Y5 1582 aa7.26□□□□□ -1.25
PTPRO-210ENST00000544244 NFAT5O94916 1531 aa7.26□□□□□ -1.25
PTPRO-210ENST00000544244 RBM6P78332 1123 aaKnown RBP7.26□□□□□ -1.25
PTPRO-210ENST00000544244 RBM42Q9BTD8 480 aaKnown RBP7.26□□□□□ -1.25
PTPRO-210ENST00000544244 SMC4Q9NTJ3 1288 aa7.26□□□□□ -1.25
PTPRO-210ENST00000544244 EXOSC9Q06265 439 aaKnown RBP7.26□□□□□ -1.25
PTPRO-210ENST00000544244 TSR2Q969E8 191 aaKnown RBP7.26□□□□□ -1.25
PTPRO-210ENST00000544244 CT47B1P0C2W7 299 aaPredicted RBP7.25□□□□□ -1.25
PTPRO-210ENST00000544244 EIF2S2P20042 333 aaKnown RBP7.25□□□□□ -1.25
PTPRO-210ENST00000544244 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
PTPRO-210ENST00000544244 BARGINQ6ZT62 677 aa7.25□□□□□ -1.25
PTPRO-210ENST00000544244 MAP2P11137 1827 aaKnown RBP7.25□□□□□ -1.25
PTPRO-210ENST00000544244 FTSJ3Q8IY81 847 aaKnown RBP7.25□□□□□ -1.25
PTPRO-210ENST00000544244 BABAM1Q9NWV8 329 aa7.25□□□□□ -1.25
PTPRO-210ENST00000544244 SUPT16HQ9Y5B9 1047 aaKnown RBP7.25□□□□□ -1.25
PTPRO-210ENST00000544244 KDRP35968 1356 aa7.25□□□□□ -1.25
PTPRO-210ENST00000544244 NHSL1Q5SYE7 1610 aa7.25□□□□□ -1.25
PTPRO-210ENST00000544244 SEPT12Q8IYM1 358 aa7.25□□□□□ -1.25
PTPRO-210ENST00000544244 MIS18AQ9NYP9 233 aa7.25□□□□□ -1.25
PTPRO-210ENST00000544244 TRIM35Q9UPQ4 493 aa7.25□□□□□ -1.25
PTPRO-210ENST00000544244 COL5A2P05997 1499 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-210ENST00000544244 ERVV-2B6SEH9 535 aa7.24□□□□□ -1.25
PTPRO-210ENST00000544244 TWISTNBQ3B726 338 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-210ENST00000544244 SMARCC1Q92922 1105 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-210ENST00000544244 COL3A1P02461 1466 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-210ENST00000544244 TRPM3Q9HCF6 1732 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-210ENST00000544244 CCDC30Q5VVM6 783 aa7.24□□□□□ -1.25
PTPRO-210ENST00000544244 LGR6Q9HBX8 967 aa7.24□□□□□ -1.25
PTPRO-210ENST00000544244 NFATC2IPQ8NCF5 419 aa7.24□□□□□ -1.25
PTPRO-210ENST00000544244 KCNV2Q8TDN2 545 aa7.24□□□□□ -1.25
PTPRO-210ENST00000544244 ZNF428Q96B54 188 aa7.24□□□□□ -1.25
PTPRO-210ENST00000544244 ACSBG1Q96GR2 724 aa7.24□□□□□ -1.25
PTPRO-210ENST00000544244 FMNL2Q96PY5 1086 aa7.24□□□□□ -1.25
PTPRO-210ENST00000544244 ZNF330Q9Y3S2 320 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-210ENST00000544244 IL17REQ8NFR9 667 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 CHMP4BQ9H444 224 aaKnown RBP7.23□□□□□ -1.25
PTPRO-210ENST00000544244 SLC52A2Q9HAB3 445 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 FANCIQ9NVI1 1328 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 ABCC6O95255 1503 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 MBIPQ9NS73 344 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 ALS2Q96Q42 1657 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 CAMTA1Q9Y6Y1 1673 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 PTCD1O75127 700 aaKnown RBP7.23□□□□□ -1.25
PTPRO-210ENST00000544244 HDGFL1Q5TGJ6 251 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 NECTIN2Q92692 538 aa7.23□□□□□ -1.25
PTPRO-210ENST00000544244 TEX13AQ9BXU3 409 aaPredicted RBP7.23□□□□□ -1.25
PTPRO-210ENST00000544244 PRIM1P49642 420 aaKnown RBP7.22□□□□□ -1.25
PTPRO-210ENST00000544244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTPRO-210ENST00000544244 KRT27Q7Z3Y8 459 aa7.22□□□□□ -1.25
PTPRO-210ENST00000544244 PELP1Q8IZL8 1130 aaKnown RBP7.22□□□□□ -1.25
PTPRO-210ENST00000544244 COL16A1Q07092 1604 aaPredicted RBP7.22□□□□□ -1.25
PTPRO-210ENST00000544244 CYP27B1O15528 508 aa7.22□□□□□ -1.25
PTPRO-210ENST00000544244 STARD3NLO95772 234 aa7.22□□□□□ -1.25
PTPRO-210ENST00000544244 CHL1O00533 1208 aa7.22□□□□□ -1.25
PTPRO-210ENST00000544244 FAM196AQ6ZSG2 479 aa7.22□□□□□ -1.25
PTPRO-210ENST00000544244 ERICH6Q7L0X2 663 aa7.22□□□□□ -1.25
PTPRO-210ENST00000544244 NCAPD2Q15021 1401 aa7.21□□□□□ -1.25
PTPRO-210ENST00000544244 TCERG1O14776 1098 aaKnown RBP7.21□□□□□ -1.25
PTPRO-210ENST00000544244 DDX58O95786 925 aaKnown RBP7.21□□□□□ -1.25
PTPRO-210ENST00000544244 SNRPA1P09661 255 aaKnown RBP7.21□□□□□ -1.25
PTPRO-210ENST00000544244 COL14A1Q05707 1796 aaKnown RBP7.21□□□□□ -1.25
PTPRO-210ENST00000544244 SLC39A6Q13433 755 aa7.21□□□□□ -1.26
PTPRO-210ENST00000544244 ZKSCAN2Q63HK3 967 aa7.21□□□□□ -1.26
PTPRO-210ENST00000544244 BCL2L13Q9BXK5 485 aa7.21□□□□□ -1.26
PTPRO-210ENST00000544244 API5Q9BZZ5 524 aaKnown RBP7.21□□□□□ -1.26
PTPRO-210ENST00000544244 PLEKHG2Q9H7P9 1386 aa7.21□□□□□ -1.26
PTPRO-210ENST00000544244 OVOS2A0A0G2JMS6 1433 aa7.21□□□□□ -1.26
PTPRO-210ENST00000544244 KIF16BQ96L93 1317 aa7.21□□□□□ -1.26
PTPRO-210ENST00000544244 ZBTB47Q9UFB7 747 aaPredicted RBP7.2□□□□□ -1.26
PTPRO-210ENST00000544244 SOS1Q07889 1333 aaPredicted RBP7.2□□□□□ -1.26
PTPRO-210ENST00000544244 STK25O00506 426 aa7.2□□□□□ -1.26
PTPRO-210ENST00000544244 CAPN15O75808 1086 aa7.2□□□□□ -1.26
PTPRO-210ENST00000544244 ZNF790Q6PG37 636 aa7.2□□□□□ -1.26
PTPRO-210ENST00000544244 PHRF1Q9P1Y6 1649 aaKnown RBP7.2□□□□□ -1.26
PTPRO-210ENST00000544244 SLIT2O94813 1529 aa7.19□□□□□ -1.26
PTPRO-210ENST00000544244 FKBP5Q13451 457 aaPredicted RBP7.19□□□□□ -1.26
PTPRO-210ENST00000544244 ALDH1L2Q3SY69 923 aa7.19□□□□□ -1.26
PTPRO-210ENST00000544244 HDAC5Q9UQL6 1122 aa7.19□□□□□ -1.26
PTPRO-210ENST00000544244 IRX6P78412 446 aaPredicted RBP7.19□□□□□ -1.26
PTPRO-210ENST00000544244 MEGF6O75095 1541 aa7.19□□□□□ -1.26
PTPRO-210ENST00000544244 PEAK1Q9H792 1746 aa7.19□□□□□ -1.26
PTPRO-210ENST00000544244 ZNF521Q96K83 1311 aa7.19□□□□□ -1.26
PTPRO-210ENST00000544244 NPHP1O15259 732 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 NEXNQ0ZGT2 675 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 SLC4A10Q6U841 1118 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 ILDR1Q86SU0 546 aaPredicted RBP7.18□□□□□ -1.26
PTPRO-210ENST00000544244 MARCH10Q8NA82 808 aaPredicted RBP7.18□□□□□ -1.26
PTPRO-210ENST00000544244 LTN1O94822 1766 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 HOXB7P09629 217 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 AIMP1Q12904 312 aaKnown RBP7.18□□□□□ -1.26
PTPRO-210ENST00000544244 C8orf58Q8NAV2 365 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 DBF4Q9UBU7 674 aaPredicted RBP7.18□□□□□ -1.26
PTPRO-210ENST00000544244 ZNF853P0CG23 659 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 ATP6V1AP38606 617 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 RRP1P56182 461 aaKnown RBP7.18□□□□□ -1.26
PTPRO-210ENST00000544244 KIF6Q6ZMV9 814 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 RIC3Q7Z5B4 369 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 CLUAP1Q96AJ1 413 aa7.18□□□□□ -1.26
PTPRO-210ENST00000544244 RARSP54136 660 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms