RNA–Protein interactions for RNA: ENST00000544018.6

LRCOL1-203, Transcript of leucine rich colipase like 1, humanhuman

TSL 5

Gene LRCOL1, Length 825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-203ENST00000544018 ATG3Q9NT62 314 aa22.68■■□□□ 1.22
LRCOL1-203ENST00000544018 PHF14O94880 888 aa22.67■■□□□ 1.22
LRCOL1-203ENST00000544018 MSL1Q68DK7 614 aa22.67■■□□□ 1.22
LRCOL1-203ENST00000544018 UBR3Q6ZT12 1888 aa22.66■■□□□ 1.22
LRCOL1-203ENST00000544018 NPC1L1Q9UHC9 1359 aa22.66■■□□□ 1.22
LRCOL1-203ENST00000544018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.66■■□□□ 1.22
LRCOL1-203ENST00000544018 AEBP1Q8IUX7 1158 aa22.66■■□□□ 1.22
LRCOL1-203ENST00000544018 PELP1Q8IZL8 1130 aaKnown RBP22.66■■□□□ 1.22
LRCOL1-203ENST00000544018 RBM42Q9BTD8 480 aaKnown RBP22.66■■□□□ 1.22
LRCOL1-203ENST00000544018 GNPATO15228 680 aa22.65■■□□□ 1.22
LRCOL1-203ENST00000544018 PER1O15534 1290 aaPredicted RBP22.65■■□□□ 1.22
LRCOL1-203ENST00000544018 DIAPH1O60610 1272 aaKnown RBP22.65■■□□□ 1.22
LRCOL1-203ENST00000544018 LINC00116Q8NCU8 138 aa22.64■■□□□ 1.21
LRCOL1-203ENST00000544018 ZNF831Q5JPB2 1677 aa22.64■■□□□ 1.21
LRCOL1-203ENST00000544018 AKAP4Q5JQC9 854 aa22.63■■□□□ 1.21
LRCOL1-203ENST00000544018 RTCBQ9Y3I0 505 aaKnown RBP22.63■■□□□ 1.21
LRCOL1-203ENST00000544018 CD2APQ9Y5K6 639 aa22.63■■□□□ 1.21
LRCOL1-203ENST00000544018 KDM6AO15550 1401 aaPredicted RBP22.61■■□□□ 1.21
LRCOL1-203ENST00000544018 GRIN3BO60391 1043 aa22.61■■□□□ 1.21
LRCOL1-203ENST00000544018 ITPK1Q13572 414 aa22.61■■□□□ 1.21
LRCOL1-203ENST00000544018 ADRA2BP18089 450 aa22.6■■□□□ 1.21
LRCOL1-203ENST00000544018 TRAPPC3LQ5T215 181 aa22.6■■□□□ 1.21
LRCOL1-203ENST00000544018 RC3H1Q5TC82 1133 aaKnown RBP22.6■■□□□ 1.21
LRCOL1-203ENST00000544018 SCN11AQ9UI33 1791 aa22.59■■□□□ 1.21
LRCOL1-203ENST00000544018 HMOX1P09601 288 aa22.59■■□□□ 1.21
LRCOL1-203ENST00000544018 NFATC2IPQ8NCF5 419 aa22.59■■□□□ 1.21
LRCOL1-203ENST00000544018 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
LRCOL1-203ENST00000544018 NLGN2Q8NFZ4 835 aa22.58■■□□□ 1.21
LRCOL1-203ENST00000544018 CNTNAP4Q9C0A0 1308 aa22.57■■□□□ 1.2
LRCOL1-203ENST00000544018 CNGB1Q14028 1251 aaPredicted RBP22.57■■□□□ 1.2
LRCOL1-203ENST00000544018 PTCD1O75127 700 aaKnown RBP22.56■■□□□ 1.2
LRCOL1-203ENST00000544018 NLGN1Q8N2Q7 840 aa22.56■■□□□ 1.2
LRCOL1-203ENST00000544018 U2SURPO15042 1029 aaKnown RBP22.55■■□□□ 1.2
LRCOL1-203ENST00000544018 RFC4P35249 363 aa22.55■■□□□ 1.2
LRCOL1-203ENST00000544018 RPS6KA4O75676 772 aa22.54■■□□□ 1.2
LRCOL1-203ENST00000544018 SLC52A2Q9HAB3 445 aa22.54■■□□□ 1.2
LRCOL1-203ENST00000544018 COL5A3P25940 1745 aaPredicted RBP22.54■■□□□ 1.2
LRCOL1-203ENST00000544018 NUDCQ9Y266 331 aa22.53■■□□□ 1.2
LRCOL1-203ENST00000544018 AMIGO3Q86WK7 504 aa22.52■■□□□ 1.2
LRCOL1-203ENST00000544018 ZNF784Q8NCA9 323 aaPredicted RBP22.52■■□□□ 1.2
LRCOL1-203ENST00000544018 RNMTO43148 476 aaKnown RBP22.51■■□□□ 1.19
LRCOL1-203ENST00000544018 GAS2L2Q8NHY3 880 aa22.51■■□□□ 1.19
LRCOL1-203ENST00000544018 VIRMAQ69YN4 1812 aaKnown RBP22.5■■□□□ 1.19
LRCOL1-203ENST00000544018 SMIM5Q71RC9 77 aa22.5■■□□□ 1.19
LRCOL1-203ENST00000544018 SLC4A9Q96Q91 983 aa22.5■■□□□ 1.19
LRCOL1-203ENST00000544018 MMP10P09238 476 aa22.49■■□□□ 1.19
LRCOL1-203ENST00000544018 CRKLP46109 303 aaKnown RBP22.49■■□□□ 1.19
LRCOL1-203ENST00000544018 MTHFSDQ2M296 383 aaKnown RBP22.49■■□□□ 1.19
LRCOL1-203ENST00000544018 ARHGEF1Q92888 912 aaKnown RBP22.49■■□□□ 1.19
LRCOL1-203ENST00000544018 MRC1P22897 1456 aa22.47■■□□□ 1.19
LRCOL1-203ENST00000544018 CICQ96RK0 1608 aaPredicted RBP22.47■■□□□ 1.19
LRCOL1-203ENST00000544018 TTC5Q8N0Z6 440 aa22.47■■□□□ 1.19
LRCOL1-203ENST00000544018 LGR6Q9HBX8 967 aa22.47■■□□□ 1.19
LRCOL1-203ENST00000544018 PARP3Q9Y6F1 533 aa22.47■■□□□ 1.19
LRCOL1-203ENST00000544018 YBX3P16989 372 aaKnown RBP eCLIP22.46■■□□□ 1.19
LRCOL1-203ENST00000544018 TEFQ10587 303 aa22.46■■□□□ 1.19
LRCOL1-203ENST00000544018 CCDC87Q9NVE4 849 aa22.46■■□□□ 1.19
LRCOL1-203ENST00000544018 COL3A1P02461 1466 aaPredicted RBP22.46■■□□□ 1.19
LRCOL1-203ENST00000544018 GNAT3A8MTJ3 354 aa22.45■■□□□ 1.18
LRCOL1-203ENST00000544018 MYH14Q7Z406 1995 aaKnown RBP22.45■■□□□ 1.18
LRCOL1-203ENST00000544018 TJP1Q07157 1748 aa22.43■■□□□ 1.18
LRCOL1-203ENST00000544018 ZPR1O75312 459 aa22.43■■□□□ 1.18
LRCOL1-203ENST00000544018 GYS1P13807 737 aa22.43■■□□□ 1.18
LRCOL1-203ENST00000544018 TGFB2P61812 414 aa22.43■■□□□ 1.18
LRCOL1-203ENST00000544018 VSIG10Q8N0Z9 540 aa22.43■■□□□ 1.18
LRCOL1-203ENST00000544018 C4AP0C0L4 1744 aa22.42■■□□□ 1.18
LRCOL1-203ENST00000544018 ADAMTS7Q9UKP4 1686 aa22.42■■□□□ 1.18
LRCOL1-203ENST00000544018 NEFMP07197 916 aa22.41■■□□□ 1.18
LRCOL1-203ENST00000544018 DNAJC10Q8IXB1 793 aa22.41■■□□□ 1.18
LRCOL1-203ENST00000544018 USP42Q9H9J4 1324 aaKnown RBP22.4■■□□□ 1.18
LRCOL1-203ENST00000544018 STARD3NLO95772 234 aa22.4■■□□□ 1.18
LRCOL1-203ENST00000544018 SLC39A6Q13433 755 aa22.4■■□□□ 1.18
LRCOL1-203ENST00000544018 KIF13BQ9NQT8 1826 aa22.39■■□□□ 1.17
LRCOL1-203ENST00000544018 U2AF1L5P0DN76 240 aaPredicted RBP22.39■■□□□ 1.17
LRCOL1-203ENST00000544018 PPP2R1AP30153 589 aa22.39■■□□□ 1.17
LRCOL1-203ENST00000544018 PRKAR2BP31323 418 aa22.39■■□□□ 1.17
LRCOL1-203ENST00000544018 U2AF1Q01081 240 aaKnown RBP eCLIP22.39■■□□□ 1.17
LRCOL1-203ENST00000544018 TEX13AQ9BXU3 409 aaPredicted RBP22.39■■□□□ 1.17
LRCOL1-203ENST00000544018 INTS5Q6P9B9 1019 aaKnown RBP22.38■■□□□ 1.17
LRCOL1-203ENST00000544018 NPM2Q86SE8 214 aaKnown RBP22.38■■□□□ 1.17
LRCOL1-203ENST00000544018 RTF1Q92541 710 aaKnown RBP22.38■■□□□ 1.17
LRCOL1-203ENST00000544018 CYP19A1P11511 503 aaPredicted RBP22.37■■□□□ 1.17
LRCOL1-203ENST00000544018 GIGYF1O75420 1035 aaPredicted RBP22.36■■□□□ 1.17
LRCOL1-203ENST00000544018 FCHSD2O94868 740 aa22.36■■□□□ 1.17
LRCOL1-203ENST00000544018 C10orf71Q711Q0 1435 aa22.36■■□□□ 1.17
LRCOL1-203ENST00000544018 KCPQ6ZWJ8 1503 aa22.36■■□□□ 1.17
LRCOL1-203ENST00000544018 SOS1Q07889 1333 aaPredicted RBP22.35■■□□□ 1.17
LRCOL1-203ENST00000544018 RSPH6AQ9H0K4 717 aa22.35■■□□□ 1.17
LRCOL1-203ENST00000544018 UBR2Q8IWV8 1755 aa22.35■■□□□ 1.17
LRCOL1-203ENST00000544018 A0A087WZG4 1122 aa22.34■■□□□ 1.17
LRCOL1-203ENST00000544018 ZNF790Q6PG37 636 aa22.34■■□□□ 1.17
LRCOL1-203ENST00000544018 SRP68Q9UHB9 627 aaKnown RBP22.34■■□□□ 1.17
LRCOL1-203ENST00000544018 WWC3Q9ULE0 1092 aa22.34■■□□□ 1.17
LRCOL1-203ENST00000544018 COL15A1P39059 1388 aa22.34■■□□□ 1.17
LRCOL1-203ENST00000544018 IL17REQ8NFR9 667 aa22.33■■□□□ 1.17
LRCOL1-203ENST00000544018 FMNL2Q96PY5 1086 aa22.33■■□□□ 1.17
LRCOL1-203ENST00000544018 NARFQ9UHQ1 456 aa22.33■■□□□ 1.17
LRCOL1-203ENST00000544018 BCS1LQ9Y276 419 aa22.33■■□□□ 1.17
LRCOL1-203ENST00000544018 UTRNP46939 3433 aa22.33■■□□□ 1.16
LRCOL1-203ENST00000544018 PXDNLA1KZ92 1463 aa22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms