RNA–Protein interactions for RNA: ENST00000543955.5

PGAM5-204, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 2 BASIC

Gene PGAM5, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-204ENST00000543955 ERVV-2B6SEH9 535 aa27.22■■□□□ 1.95
PGAM5-204ENST00000543955 MIS18AQ9NYP9 233 aa27.22■■□□□ 1.95
PGAM5-204ENST00000543955 GTF3C3Q9Y5Q9 886 aa27.22■■□□□ 1.95
PGAM5-204ENST00000543955 DOT1LQ8TEK3 1739 aa27.22■■□□□ 1.95
PGAM5-204ENST00000543955 ITGB4P16144 1822 aa27.21■■□□□ 1.95
PGAM5-204ENST00000543955 RNF123Q5XPI4 1314 aa27.21■■□□□ 1.95
PGAM5-204ENST00000543955 PAPPAQ13219 1627 aa27.2■■□□□ 1.94
PGAM5-204ENST00000543955 CABP4P57796 275 aa27.2■■□□□ 1.94
PGAM5-204ENST00000543955 TWISTNBQ3B726 338 aaPredicted RBP27.2■■□□□ 1.94
PGAM5-204ENST00000543955 ZNF772Q68DY9 489 aaPredicted RBP27.19■■□□□ 1.94
PGAM5-204ENST00000543955 SOS1Q07889 1333 aaPredicted RBP27.19■■□□□ 1.94
PGAM5-204ENST00000543955 NEFLP07196 543 aa27.18■■□□□ 1.94
PGAM5-204ENST00000543955 RARSP54136 660 aaKnown RBP27.17■■□□□ 1.94
PGAM5-204ENST00000543955 C8orf58Q8NAV2 365 aa27.17■■□□□ 1.94
PGAM5-204ENST00000543955 NFATC2IPQ8NCF5 419 aa27.17■■□□□ 1.94
PGAM5-204ENST00000543955 QTRT2Q9H974 415 aaKnown RBP27.17■■□□□ 1.94
PGAM5-204ENST00000543955 A0A0G2JS52 829 aa27.17■■□□□ 1.94
PGAM5-204ENST00000543955 RRP1P56182 461 aaKnown RBP27.17■■□□□ 1.94
PGAM5-204ENST00000543955 MYT1Q01538 1121 aa27.17■■□□□ 1.94
PGAM5-204ENST00000543955 TSPYL6Q8N831 410 aa27.16■■□□□ 1.94
PGAM5-204ENST00000543955 UBR2Q8IWV8 1755 aa27.16■■□□□ 1.94
PGAM5-204ENST00000543955 VAMP4O75379 141 aa27.15■■□□□ 1.94
PGAM5-204ENST00000543955 ALDH1L2Q3SY69 923 aa27.14■■□□□ 1.94
PGAM5-204ENST00000543955 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.14■■□□□ 1.94
PGAM5-204ENST00000543955 KAT6BQ8WYB5 2073 aa27.14■■□□□ 1.93
PGAM5-204ENST00000543955 ONECUT3O60422 494 aaPredicted RBP27.13■■□□□ 1.93
PGAM5-204ENST00000543955 ELL2O00472 640 aaPredicted RBP27.12■■□□□ 1.93
PGAM5-204ENST00000543955 EIF4A1P60842 406 aaKnown RBP27.12■■□□□ 1.93
PGAM5-204ENST00000543955 KRT24Q2M2I5 525 aa27.12■■□□□ 1.93
PGAM5-204ENST00000543955 MARCH10Q8NA82 808 aaPredicted RBP27.12■■□□□ 1.93
PGAM5-204ENST00000543955 CACNA1FO60840 1977 aa27.12■■□□□ 1.93
PGAM5-204ENST00000543955 ZNF790Q6PG37 636 aa27.12■■□□□ 1.93
PGAM5-204ENST00000543955 TMOD3Q9NYL9 352 aa27.12■■□□□ 1.93
PGAM5-204ENST00000543955 HOXB7P09629 217 aa27.11■■□□□ 1.93
PGAM5-204ENST00000543955 TTC5Q8N0Z6 440 aa27.11■■□□□ 1.93
PGAM5-204ENST00000543955 SMC4Q9NTJ3 1288 aa27.11■■□□□ 1.93
PGAM5-204ENST00000543955 BCAR3O75815 825 aa27.1■■□□□ 1.93
PGAM5-204ENST00000543955 SSH1Q8WYL5 1049 aa27.09■■□□□ 1.93
PGAM5-204ENST00000543955 CHMP4AQ9BY43 222 aa27.09■■□□□ 1.93
PGAM5-204ENST00000543955 HEG1Q9ULI3 1381 aa27.08■■□□□ 1.93
PGAM5-204ENST00000543955 KCNQ3O43525 872 aa27.08■■□□□ 1.93
PGAM5-204ENST00000543955 LAMB4A4D0S4 1761 aa27.08■■□□□ 1.93
PGAM5-204ENST00000543955 BCL9O00512 1426 aa27.08■■□□□ 1.93
PGAM5-204ENST00000543955 KIF16BQ96L93 1317 aa27.07■■□□□ 1.92
PGAM5-204ENST00000543955 BCL2L13Q9BXK5 485 aa27.07■■□□□ 1.92
PGAM5-204ENST00000543955 C5P01031 1676 aa27.07■■□□□ 1.92
PGAM5-204ENST00000543955 SLC39A6Q13433 755 aa27.07■■□□□ 1.92
PGAM5-204ENST00000543955 BRPF1P55201 1214 aaPredicted RBP27.06■■□□□ 1.92
PGAM5-204ENST00000543955 RBM6P78332 1123 aaKnown RBP27.06■■□□□ 1.92
PGAM5-204ENST00000543955 CANXP27824 592 aaKnown RBP27.05■■□□□ 1.92
PGAM5-204ENST00000543955 SEPT12Q8IYM1 358 aa27.05■■□□□ 1.92
PGAM5-204ENST00000543955 KCPQ6ZWJ8 1503 aa27.05■■□□□ 1.92
PGAM5-204ENST00000543955 BRWD3Q6RI45 1802 aa27.05■■□□□ 1.92
PGAM5-204ENST00000543955 FMNL2Q96PY5 1086 aa27.04■■□□□ 1.92
PGAM5-204ENST00000543955 NHSQ6T4R5 1651 aa27.03■■□□□ 1.92
PGAM5-204ENST00000543955 GIGYF1O75420 1035 aaPredicted RBP27.02■■□□□ 1.92
PGAM5-204ENST00000543955 CCDC30Q5VVM6 783 aa27.02■■□□□ 1.92
PGAM5-204ENST00000543955 PIGBQ92521 554 aa27.02■■□□□ 1.92
PGAM5-204ENST00000543955 PLIN1O60240 522 aa27.02■■□□□ 1.92
PGAM5-204ENST00000543955 SYTL4Q96C24 671 aaPredicted RBP27.02■■□□□ 1.92
PGAM5-204ENST00000543955 MRPL50Q8N5N7 158 aaKnown RBP27.01■■□□□ 1.91
PGAM5-204ENST00000543955 FRAT1Q92837 279 aaPredicted RBP27.01■■□□□ 1.91
PGAM5-204ENST00000543955 ZNF496Q96IT1 587 aaPredicted RBP27.01■■□□□ 1.91
PGAM5-204ENST00000543955 STK31Q9BXU1 1019 aa27.01■■□□□ 1.91
PGAM5-204ENST00000543955 SBF2Q86WG5 1849 aa27■■□□□ 1.91
PGAM5-204ENST00000543955 PRIM1P49642 420 aaKnown RBP27■■□□□ 1.91
PGAM5-204ENST00000543955 HDGFL1Q5TGJ6 251 aa27■■□□□ 1.91
PGAM5-204ENST00000543955 FKBP8Q14318 412 aa26.99■■□□□ 1.91
PGAM5-204ENST00000543955 IPO8O15397 1037 aaKnown RBP26.99■■□□□ 1.91
PGAM5-204ENST00000543955 ZKSCAN2Q63HK3 967 aa26.99■■□□□ 1.91
PGAM5-204ENST00000543955 SNRPA1P09661 255 aaKnown RBP26.98■■□□□ 1.91
PGAM5-204ENST00000543955 IRX6P78412 446 aaPredicted RBP26.98■■□□□ 1.91
PGAM5-204ENST00000543955 ACSBG1Q96GR2 724 aa26.97■■□□□ 1.91
PGAM5-204ENST00000543955 TCERG1O14776 1098 aaKnown RBP26.96■■□□□ 1.91
PGAM5-204ENST00000543955 MS4A1P11836 297 aa26.96■■□□□ 1.91
PGAM5-204ENST00000543955 PDE3AQ14432 1141 aa26.96■■□□□ 1.91
PGAM5-204ENST00000543955 NOB1Q9ULX3 412 aaKnown RBP26.96■■□□□ 1.91
PGAM5-204ENST00000543955 RXRBP28702 533 aa26.95■■□□□ 1.9
PGAM5-204ENST00000543955 ERICH6BQ5W0A0 696 aa26.95■■□□□ 1.9
PGAM5-204ENST00000543955 ATG3Q9NT62 314 aa26.95■■□□□ 1.9
PGAM5-204ENST00000543955 ARHGAP45Q92619 1136 aa26.94■■□□□ 1.9
PGAM5-204ENST00000543955 ASAP1Q9ULH1 1129 aa26.94■■□□□ 1.9
PGAM5-204ENST00000543955 BTAF1O14981 1849 aa26.94■■□□□ 1.9
PGAM5-204ENST00000543955 EIF2S2P20042 333 aaKnown RBP26.94■■□□□ 1.9
PGAM5-204ENST00000543955 ATF7IPQ6VMQ6 1270 aa26.94■■□□□ 1.9
PGAM5-204ENST00000543955 CICQ96RK0 1608 aaPredicted RBP26.93■■□□□ 1.9
PGAM5-204ENST00000543955 SLC4A2P04920 1241 aa26.93■■□□□ 1.9
PGAM5-204ENST00000543955 PTPRCP08575 1304 aa26.92■■□□□ 1.9
PGAM5-204ENST00000543955 KRT27Q7Z3Y8 459 aa26.92■■□□□ 1.9
PGAM5-204ENST00000543955 VSIG10Q8N0Z9 540 aa26.92■■□□□ 1.9
PGAM5-204ENST00000543955 RGS17Q9UGC6 210 aaPredicted RBP26.92■■□□□ 1.9
PGAM5-204ENST00000543955 PTCD1O75127 700 aaKnown RBP26.92■■□□□ 1.9
PGAM5-204ENST00000543955 NECTIN2Q92692 538 aa26.92■■□□□ 1.9
PGAM5-204ENST00000543955 PRAMEF22A3QJZ6 481 aa26.91■■□□□ 1.9
PGAM5-204ENST00000543955 FTSJ3Q8IY81 847 aaKnown RBP26.91■■□□□ 1.9
PGAM5-204ENST00000543955 DBF4Q9UBU7 674 aaPredicted RBP26.91■■□□□ 1.9
PGAM5-204ENST00000543955 ZNF831Q5JPB2 1677 aa26.91■■□□□ 1.9
PGAM5-204ENST00000543955 TRIM27P14373 513 aa26.9■■□□□ 1.9
PGAM5-204ENST00000543955 TJP1Q07157 1748 aa26.9■■□□□ 1.9
PGAM5-204ENST00000543955 C20orf194Q5TEA3 1177 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms