RNA–Protein interactions for RNA: ENST00000543755.1

CD4-211, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 494 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-211ENST00000543755 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
CD4-211ENST00000543755 IP6K1Q92551 441 aa12.57□□□□□ -0.4
CD4-211ENST00000543755 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
CD4-211ENST00000543755 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
CD4-211ENST00000543755 TMEM88BA6NKF7 163 aa12.56□□□□□ -0.4
CD4-211ENST00000543755 POTECB2RU33 542 aa12.56□□□□□ -0.4
CD4-211ENST00000543755 POTEIP0CG38 1075 aa12.56□□□□□ -0.4
CD4-211ENST00000543755 POTEJP0CG39 1038 aa12.56□□□□□ -0.4
CD4-211ENST00000543755 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
CD4-211ENST00000543755 BEGAINQ9BUH8 593 aa12.56□□□□□ -0.4
CD4-211ENST00000543755 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
CD4-211ENST00000543755 LMNB1P20700 586 aa12.55□□□□□ -0.4
CD4-211ENST00000543755 TRAPPC3LQ5T215 181 aa12.55□□□□□ -0.4
CD4-211ENST00000543755 LOC102724428A0A0B4J2F2 783 aa12.54□□□□□ -0.4
CD4-211ENST00000543755 SIK1P57059 783 aa12.54□□□□□ -0.4
CD4-211ENST00000543755 NBPF1Q3BBV0 1214 aa12.54□□□□□ -0.4
CD4-211ENST00000543755 NME9Q86XW9 330 aa12.54□□□□□ -0.4
CD4-211ENST00000543755 LINC00116Q8NCU8 138 aa12.54□□□□□ -0.4
CD4-211ENST00000543755 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
CD4-211ENST00000543755 RTCBQ9Y3I0 505 aaKnown RBP12.54□□□□□ -0.4
CD4-211ENST00000543755 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
CD4-211ENST00000543755 PCDH11YQ9BZA8 1340 aa12.54□□□□□ -0.4
CD4-211ENST00000543755 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
CD4-211ENST00000543755 CHRNA5P30532 468 aa12.53□□□□□ -0.4
CD4-211ENST00000543755 AMPHP49418 695 aa12.53□□□□□ -0.4
CD4-211ENST00000543755 SOX10P56693 466 aa12.53□□□□□ -0.4
CD4-211ENST00000543755 DEFB115Q30KQ5 88 aa12.53□□□□□ -0.4
CD4-211ENST00000543755 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
CD4-211ENST00000543755 WDR33Q9C0J8 1336 aaKnown RBP12.53□□□□□ -0.4
CD4-211ENST00000543755 MEGF6O75095 1541 aa12.52□□□□□ -0.4
CD4-211ENST00000543755 ATP6V1AP38606 617 aa12.52□□□□□ -0.41
CD4-211ENST00000543755 PASKQ96RG2 1323 aa12.52□□□□□ -0.41
CD4-211ENST00000543755 BRCA1P38398 1863 aaKnown RBP12.52□□□□□ -0.41
CD4-211ENST00000543755 RFC4P35249 363 aa12.51□□□□□ -0.41
CD4-211ENST00000543755 GRM1Q13255 1194 aa12.51□□□□□ -0.41
CD4-211ENST00000543755 DGKZQ13574 1117 aa12.51□□□□□ -0.41
CD4-211ENST00000543755 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
CD4-211ENST00000543755 HDGFL2Q7Z4V5 671 aaPredicted RBP12.5□□□□□ -0.41
CD4-211ENST00000543755 ABT1Q9ULW3 272 aaKnown RBP12.5□□□□□ -0.41
CD4-211ENST00000543755 KDM6AO15550 1401 aaPredicted RBP12.5□□□□□ -0.41
CD4-211ENST00000543755 C4AP0C0L4 1744 aa12.5□□□□□ -0.41
CD4-211ENST00000543755 PDE4DIPQ5VU43 2346 aa12.49□□□□□ -0.41
CD4-211ENST00000543755 SBF1O95248 1867 aa12.49□□□□□ -0.41
CD4-211ENST00000543755 VIRMAQ69YN4 1812 aaKnown RBP12.49□□□□□ -0.41
CD4-211ENST00000543755 ADRA2BP18089 450 aa12.49□□□□□ -0.41
CD4-211ENST00000543755 RASSF10A6NK89 507 aa12.48□□□□□ -0.41
CD4-211ENST00000543755 HOXC9P31274 260 aa12.48□□□□□ -0.41
CD4-211ENST00000543755 PIGBQ92521 554 aa12.48□□□□□ -0.41
CD4-211ENST00000543755 TIAM2Q8IVF5 1701 aa12.48□□□□□ -0.41
CD4-211ENST00000543755 SMG6Q86US8 1419 aaKnown RBP12.47□□□□□ -0.41
CD4-211ENST00000543755 GYS1P13807 737 aa12.47□□□□□ -0.41
CD4-211ENST00000543755 LDHDQ86WU2 507 aa12.47□□□□□ -0.41
CD4-211ENST00000543755 TMOD3Q9NYL9 352 aa12.47□□□□□ -0.41
CD4-211ENST00000543755 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.41
CD4-211ENST00000543755 MON2Q7Z3U7 1717 aa12.46□□□□□ -0.41
CD4-211ENST00000543755 ITPK1Q13572 414 aa12.46□□□□□ -0.41
CD4-211ENST00000543755 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
CD4-211ENST00000543755 TMC1Q8TDI8 760 aa12.46□□□□□ -0.41
CD4-211ENST00000543755 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
CD4-211ENST00000543755 GCC1Q96CN9 775 aa12.46□□□□□ -0.41
CD4-211ENST00000543755 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
CD4-211ENST00000543755 SBNO2Q9Y2G9 1366 aa12.45□□□□□ -0.42
CD4-211ENST00000543755 MAP3K19Q56UN5 1328 aa12.45□□□□□ -0.42
CD4-211ENST00000543755 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
CD4-211ENST00000543755 NBPF6Q5VWK0 638 aa12.45□□□□□ -0.42
CD4-211ENST00000543755 NBPF4Q96M43 638 aa12.45□□□□□ -0.42
CD4-211ENST00000543755 IQCA1LA6NCM1 817 aa12.44□□□□□ -0.42
CD4-211ENST00000543755 DDNO94850 711 aaPredicted RBP12.44□□□□□ -0.42
CD4-211ENST00000543755 ERFEQ4G0M1 354 aa12.44□□□□□ -0.42
CD4-211ENST00000543755 EDC4Q6P2E9 1401 aaKnown RBP12.44□□□□□ -0.42
CD4-211ENST00000543755 DLL1O00548 723 aa12.43□□□□□ -0.42
CD4-211ENST00000543755 CYP27B1O15528 508 aa12.43□□□□□ -0.42
CD4-211ENST00000543755 ITGBL1O95965 494 aaPredicted RBP12.43□□□□□ -0.42
CD4-211ENST00000543755 COG3Q96JB2 828 aa12.43□□□□□ -0.42
CD4-211ENST00000543755 CAPNS2Q96L46 248 aa12.43□□□□□ -0.42
CD4-211ENST00000543755 GPR101Q96P66 508 aaPredicted RBP12.43□□□□□ -0.42
CD4-211ENST00000543755 TERF2IPQ9NYB0 399 aa12.43□□□□□ -0.42
CD4-211ENST00000543755 NFKBIEO00221 500 aa12.42□□□□□ -0.42
CD4-211ENST00000543755 ECE1P42892 770 aa12.42□□□□□ -0.42
CD4-211ENST00000543755 HABP4Q5JVS0 413 aaKnown RBP12.42□□□□□ -0.42
CD4-211ENST00000543755 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
CD4-211ENST00000543755 CYP4F22Q6NT55 531 aa12.42□□□□□ -0.42
CD4-211ENST00000543755 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
CD4-211ENST00000543755 ASAP1Q9ULH1 1129 aa12.42□□□□□ -0.42
CD4-211ENST00000543755 ITGB4P16144 1822 aa12.41□□□□□ -0.42
CD4-211ENST00000543755 RPS6KA4O75676 772 aa12.41□□□□□ -0.42
CD4-211ENST00000543755 RTL1A6NKG5 1358 aa12.41□□□□□ -0.42
CD4-211ENST00000543755 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
CD4-211ENST00000543755 MAP2P11137 1827 aaKnown RBP12.4□□□□□ -0.42
CD4-211ENST00000543755 DDR1Q08345 913 aa12.4□□□□□ -0.42
CD4-211ENST00000543755 NBPF15Q8N660 670 aa12.4□□□□□ -0.42
CD4-211ENST00000543755 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
CD4-211ENST00000543755 TAF1DQ9H5J8 278 aaPredicted RBP12.4□□□□□ -0.42
CD4-211ENST00000543755 SPG7Q9UQ90 795 aa12.4□□□□□ -0.42
CD4-211ENST00000543755 CNTNAP4Q9C0A0 1308 aa12.39□□□□□ -0.43
CD4-211ENST00000543755 AOC2O75106 756 aa12.38□□□□□ -0.43
CD4-211ENST00000543755 FKBP8Q14318 412 aa12.38□□□□□ -0.43
CD4-211ENST00000543755 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
CD4-211ENST00000543755 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
CD4-211ENST00000543755 ATG3Q9NT62 314 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms