RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 ASAP1Q9ULH1 1129 aa9.67□□□□□ -0.86
NUP43-206ENST00000543637 C4BP0C0L5 1744 aa9.67□□□□□ -0.86
NUP43-206ENST00000543637 VIRMAQ69YN4 1812 aaKnown RBP9.66□□□□□ -0.86
NUP43-206ENST00000543637 COL24A1Q17RW2 1714 aa9.66□□□□□ -0.86
NUP43-206ENST00000543637 PER1O15534 1290 aaPredicted RBP9.66□□□□□ -0.86
NUP43-206ENST00000543637 IL13P35225 146 aa9.66□□□□□ -0.86
NUP43-206ENST00000543637 PHF14O94880 888 aa9.65□□□□□ -0.86
NUP43-206ENST00000543637 SSFA2P28290 1259 aa9.65□□□□□ -0.86
NUP43-206ENST00000543637 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
NUP43-206ENST00000543637 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
NUP43-206ENST00000543637 UBR3Q6ZT12 1888 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 GNPATO15228 680 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 HMOX1P09601 288 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 AKAP4Q5JQC9 854 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 TRAPPC3LQ5T215 181 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 MSL1Q68DK7 614 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 AEBP1Q8IUX7 1158 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 NFATC2IPQ8NCF5 419 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 RTCBQ9Y3I0 505 aaKnown RBP9.64□□□□□ -0.87
NUP43-206ENST00000543637 SCN11AQ9UI33 1791 aa9.64□□□□□ -0.87
NUP43-206ENST00000543637 MAP3K5Q99683 1374 aa9.63□□□□□ -0.87
NUP43-206ENST00000543637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
NUP43-206ENST00000543637 U2SURPO15042 1029 aaKnown RBP9.63□□□□□ -0.87
NUP43-206ENST00000543637 LINC00116Q8NCU8 138 aa9.63□□□□□ -0.87
NUP43-206ENST00000543637 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
NUP43-206ENST00000543637 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
NUP43-206ENST00000543637 PTCD1O75127 700 aaKnown RBP9.62□□□□□ -0.87
NUP43-206ENST00000543637 RFC4P35249 363 aa9.62□□□□□ -0.87
NUP43-206ENST00000543637 RC3H1Q5TC82 1133 aaKnown RBP9.62□□□□□ -0.87
NUP43-206ENST00000543637 CD2APQ9Y5K6 639 aa9.62□□□□□ -0.87
NUP43-206ENST00000543637 NPC1L1Q9UHC9 1359 aa9.62□□□□□ -0.87
NUP43-206ENST00000543637 ZNF831Q5JPB2 1677 aa9.61□□□□□ -0.87
NUP43-206ENST00000543637 RPS6KA4O75676 772 aa9.61□□□□□ -0.87
NUP43-206ENST00000543637 ITPK1Q13572 414 aa9.61□□□□□ -0.87
NUP43-206ENST00000543637 NLGN1Q8N2Q7 840 aa9.61□□□□□ -0.87
NUP43-206ENST00000543637 KDRP35968 1356 aa9.61□□□□□ -0.87
NUP43-206ENST00000543637 RNMTO43148 476 aaKnown RBP9.6□□□□□ -0.87
NUP43-206ENST00000543637 SLC52A2Q9HAB3 445 aa9.6□□□□□ -0.87
NUP43-206ENST00000543637 NEFMP07197 916 aa9.59□□□□□ -0.87
NUP43-206ENST00000543637 TEFQ10587 303 aa9.59□□□□□ -0.87
NUP43-206ENST00000543637 MTHFSDQ2M296 383 aaKnown RBP9.59□□□□□ -0.87
NUP43-206ENST00000543637 SMIM5Q71RC9 77 aa9.59□□□□□ -0.87
NUP43-206ENST00000543637 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
NUP43-206ENST00000543637 NLGN2Q8NFZ4 835 aa9.59□□□□□ -0.87
NUP43-206ENST00000543637 GAS2L2Q8NHY3 880 aa9.59□□□□□ -0.87
NUP43-206ENST00000543637 ARHGEF1Q92888 912 aaKnown RBP9.59□□□□□ -0.87
NUP43-206ENST00000543637 LGR6Q9HBX8 967 aa9.59□□□□□ -0.87
NUP43-206ENST00000543637 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
NUP43-206ENST00000543637 COL5A3P25940 1745 aaPredicted RBP9.59□□□□□ -0.87
NUP43-206ENST00000543637 KDM6AO15550 1401 aaPredicted RBP9.58□□□□□ -0.88
NUP43-206ENST00000543637 GNAT3A8MTJ3 354 aa9.58□□□□□ -0.88
NUP43-206ENST00000543637 CNTNAP4Q9C0A0 1308 aa9.57□□□□□ -0.88
NUP43-206ENST00000543637 ZPR1O75312 459 aa9.57□□□□□ -0.88
NUP43-206ENST00000543637 CRKLP46109 303 aaKnown RBP9.57□□□□□ -0.88
NUP43-206ENST00000543637 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
NUP43-206ENST00000543637 NPM2Q86SE8 214 aaKnown RBP9.57□□□□□ -0.88
NUP43-206ENST00000543637 SLC4A9Q96Q91 983 aa9.57□□□□□ -0.88
NUP43-206ENST00000543637 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
NUP43-206ENST00000543637 MYH14Q7Z406 1995 aaKnown RBP9.56□□□□□ -0.88
NUP43-206ENST00000543637 MMP10P09238 476 aa9.56□□□□□ -0.88
NUP43-206ENST00000543637 U2AF1L5P0DN76 240 aaPredicted RBP9.56□□□□□ -0.88
NUP43-206ENST00000543637 U2AF1Q01081 240 aaKnown RBP eCLIP9.56□□□□□ -0.88
NUP43-206ENST00000543637 RTF1Q92541 710 aaKnown RBP9.56□□□□□ -0.88
NUP43-206ENST00000543637 TEX13AQ9BXU3 409 aaPredicted RBP9.56□□□□□ -0.88
NUP43-206ENST00000543637 FCHSD2O94868 740 aa9.55□□□□□ -0.88
NUP43-206ENST00000543637 PPP2R1AP30153 589 aa9.55□□□□□ -0.88
NUP43-206ENST00000543637 TGFB2P61812 414 aa9.55□□□□□ -0.88
NUP43-206ENST00000543637 SLC39A6Q13433 755 aa9.55□□□□□ -0.88
NUP43-206ENST00000543637 AMIGO3Q86WK7 504 aa9.55□□□□□ -0.88
NUP43-206ENST00000543637 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
NUP43-206ENST00000543637 ZNF784Q8NCA9 323 aaPredicted RBP9.55□□□□□ -0.88
NUP43-206ENST00000543637 PNNQ9H307 717 aaKnown RBP9.55□□□□□ -0.88
NUP43-206ENST00000543637 STARD3NLO95772 234 aa9.54□□□□□ -0.88
NUP43-206ENST00000543637 GYS1P13807 737 aa9.54□□□□□ -0.88
NUP43-206ENST00000543637 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
NUP43-206ENST00000543637 DNAJC10Q8IXB1 793 aa9.54□□□□□ -0.88
NUP43-206ENST00000543637 TJP1Q07157 1748 aa9.53□□□□□ -0.88
NUP43-206ENST00000543637 N4BP2Q86UW6 1770 aaPredicted RBP9.53□□□□□ -0.88
NUP43-206ENST00000543637 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
NUP43-206ENST00000543637 YBX3P16989 372 aaKnown RBP eCLIP9.53□□□□□ -0.881e-8■□□□□ 10.1
NUP43-206ENST00000543637 C4AP0C0L4 1744 aa9.53□□□□□ -0.88
NUP43-206ENST00000543637 KIF13BQ9NQT8 1826 aa9.52□□□□□ -0.89
NUP43-206ENST00000543637 A0A087WZG4 1122 aa9.52□□□□□ -0.89
NUP43-206ENST00000543637 CYP19A1P11511 503 aaPredicted RBP9.52□□□□□ -0.89
NUP43-206ENST00000543637 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
NUP43-206ENST00000543637 INTS5Q6P9B9 1019 aaKnown RBP9.52□□□□□ -0.89
NUP43-206ENST00000543637 ZNF790Q6PG37 636 aa9.52□□□□□ -0.89
NUP43-206ENST00000543637 IL17REQ8NFR9 667 aa9.52□□□□□ -0.89
NUP43-206ENST00000543637 FMNL2Q96PY5 1086 aa9.52□□□□□ -0.89
NUP43-206ENST00000543637 CICQ96RK0 1608 aaPredicted RBP9.52□□□□□ -0.89
NUP43-206ENST00000543637 A0A0G2JLW4 131 aa9.51□□□□□ -0.89
NUP43-206ENST00000543637 HTATSF1O43719 755 aaKnown RBP9.51□□□□□ -0.89
NUP43-206ENST00000543637 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
NUP43-206ENST00000543637 PHACTR3Q96KR7 559 aa9.51□□□□□ -0.89
NUP43-206ENST00000543637 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
NUP43-206ENST00000543637 SRP68Q9UHB9 627 aaKnown RBP9.51□□□□□ -0.89
NUP43-206ENST00000543637 WWC3Q9ULE0 1092 aa9.51□□□□□ -0.89
NUP43-206ENST00000543637 BCS1LQ9Y276 419 aa9.51□□□□□ -0.89
NUP43-206ENST00000543637 COL3A1P02461 1466 aaPredicted RBP9.51□□□□□ -0.89
NUP43-206ENST00000543637 ADAMTS7Q9UKP4 1686 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms