RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 CEMIPQ8WUJ3 1361 aa17.31■□□□□ 0.36
MSH2-206ENST00000543555 CDC45O75419 566 aa17.29■□□□□ 0.36
MSH2-206ENST00000543555 SLIT3O75094 1523 aa17.29■□□□□ 0.36
MSH2-206ENST00000543555 HMMRO75330 724 aa17.29■□□□□ 0.36
MSH2-206ENST00000543555 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
MSH2-206ENST00000543555 MED1Q15648 1581 aaPredicted RBP17.29■□□□□ 0.36
MSH2-206ENST00000543555 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
MSH2-206ENST00000543555 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
MSH2-206ENST00000543555 GCP02774 474 aa17.28■□□□□ 0.36
MSH2-206ENST00000543555 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
MSH2-206ENST00000543555 ARHGEF25Q86VW2 580 aa17.27■□□□□ 0.36
MSH2-206ENST00000543555 GNAI2P04899 355 aa17.27■□□□□ 0.35
MSH2-206ENST00000543555 HSCBQ8IWL3 235 aa17.27■□□□□ 0.35
MSH2-206ENST00000543555 UBAP1LF5GYI3 381 aa17.26■□□□□ 0.35
MSH2-206ENST00000543555 LRRC59Q96AG4 307 aaKnown RBP17.26■□□□□ 0.35
MSH2-206ENST00000543555 GSE1Q14687 1217 aa17.26■□□□□ 0.35
MSH2-206ENST00000543555 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
MSH2-206ENST00000543555 NPHP3Q7Z494 1330 aa17.26■□□□□ 0.35
MSH2-206ENST00000543555 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
MSH2-206ENST00000543555 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
MSH2-206ENST00000543555 SNX21Q969T3 373 aa17.26■□□□□ 0.35
MSH2-206ENST00000543555 CHRNA2Q15822 529 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 HDGFL1Q5TGJ6 251 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 BCL11AQ9H165 835 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 LGR6Q9HBX8 967 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 PXDNLA1KZ92 1463 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 NCAPD2Q15021 1401 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 APBB1O00213 710 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 GNAI3P08754 354 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 TRPM3Q9HCF6 1732 aaPredicted RBP17.25■□□□□ 0.35
MSH2-206ENST00000543555 CACNA1FO60840 1977 aa17.25■□□□□ 0.35
MSH2-206ENST00000543555 KIF2CQ99661 725 aa17.24■□□□□ 0.35
MSH2-206ENST00000543555 LMO7Q8WWI1 1683 aa17.24■□□□□ 0.35
MSH2-206ENST00000543555 LTBP4Q8N2S1 1624 aa17.24■□□□□ 0.35
MSH2-206ENST00000543555 EIF5BO60841 1220 aaKnown RBP17.24■□□□□ 0.35
MSH2-206ENST00000543555 AKAP4Q5JQC9 854 aa17.24■□□□□ 0.35
MSH2-206ENST00000543555 N4BP2Q86UW6 1770 aaPredicted RBP17.24■□□□□ 0.35
MSH2-206ENST00000543555 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
MSH2-206ENST00000543555 EIF4A1P60842 406 aaKnown RBP17.23■□□□□ 0.35
MSH2-206ENST00000543555 ZNF530Q6P9A1 599 aaPredicted RBP17.23■□□□□ 0.35
MSH2-206ENST00000543555 KIF1AQ12756 1690 aa17.23■□□□□ 0.35
MSH2-206ENST00000543555 KDM3BQ7LBC6 1761 aa17.23■□□□□ 0.35
MSH2-206ENST00000543555 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
MSH2-206ENST00000543555 DCCP43146 1447 aa17.22■□□□□ 0.35
MSH2-206ENST00000543555 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
MSH2-206ENST00000543555 HOXB7P09629 217 aa17.22■□□□□ 0.35
MSH2-206ENST00000543555 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
MSH2-206ENST00000543555 CHMP5Q9NZZ3 219 aa17.21■□□□□ 0.35
MSH2-206ENST00000543555 SDSP20132 328 aa17.21■□□□□ 0.34
MSH2-206ENST00000543555 TEFQ10587 303 aa17.21■□□□□ 0.34
MSH2-206ENST00000543555 PHAXQ9H814 394 aaKnown RBP17.21■□□□□ 0.34
MSH2-206ENST00000543555 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
MSH2-206ENST00000543555 ATP8B2P98198 1209 aa17.2■□□□□ 0.34
MSH2-206ENST00000543555 PXDNQ92626 1479 aa17.2■□□□□ 0.34
MSH2-206ENST00000543555 AXIN2Q9Y2T1 843 aa17.2■□□□□ 0.34
MSH2-206ENST00000543555 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
MSH2-206ENST00000543555 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
MSH2-206ENST00000543555 EIF2S2P20042 333 aaKnown RBP17.19■□□□□ 0.34
MSH2-206ENST00000543555 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
MSH2-206ENST00000543555 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
MSH2-206ENST00000543555 EXOC6BQ9Y2D4 811 aa17.19■□□□□ 0.34
MSH2-206ENST00000543555 OVOS2A0A0G2JMS6 1433 aa17.19■□□□□ 0.34
MSH2-206ENST00000543555 SPATA31A3Q5VYP0 1347 aa17.18■□□□□ 0.34
MSH2-206ENST00000543555 PNMA6EA0A0J9YXQ4 647 aa17.18■□□□□ 0.34
MSH2-206ENST00000543555 BTBD11A6QL63 1104 aa17.18■□□□□ 0.34
MSH2-206ENST00000543555 KCNQ3O43525 872 aa17.18■□□□□ 0.34
MSH2-206ENST00000543555 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
MSH2-206ENST00000543555 LRRFIP2Q9Y608 721 aaKnown RBP17.18■□□□□ 0.34
MSH2-206ENST00000543555 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
MSH2-206ENST00000543555 PDE1AP54750 535 aa17.17■□□□□ 0.34
MSH2-206ENST00000543555 CASC1Q6TDU7 716 aa17.17■□□□□ 0.34
MSH2-206ENST00000543555 CHPF2Q9P2E5 772 aa17.17■□□□□ 0.34
MSH2-206ENST00000543555 TOM1O60784 492 aa17.17■□□□□ 0.34
MSH2-206ENST00000543555 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
MSH2-206ENST00000543555 LRRCC1Q9C099 1032 aa17.17■□□□□ 0.34
MSH2-206ENST00000543555 DDIT3P35638 169 aa17.16■□□□□ 0.34
MSH2-206ENST00000543555 IBTKQ9P2D0 1353 aaPredicted RBP17.16■□□□□ 0.34
MSH2-206ENST00000543555 SALL3Q9BXA9 1300 aa17.16■□□□□ 0.34
MSH2-206ENST00000543555 NUTM2BA6NNL0 878 aaPredicted RBP17.16■□□□□ 0.34
MSH2-206ENST00000543555 NUTM2EB1AL46 878 aaPredicted RBP17.16■□□□□ 0.34
MSH2-206ENST00000543555 HSP90AB1P08238 724 aaKnown RBP17.16■□□□□ 0.34
MSH2-206ENST00000543555 NUTM2AQ8IVF1 878 aaPredicted RBP17.16■□□□□ 0.34
MSH2-206ENST00000543555 ALS2Q96Q42 1657 aa17.16■□□□□ 0.34
MSH2-206ENST00000543555 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
MSH2-206ENST00000543555 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
MSH2-206ENST00000543555 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
MSH2-206ENST00000543555 USP26Q9BXU7 913 aa17.15■□□□□ 0.34
MSH2-206ENST00000543555 SOS2Q07890 1332 aaPredicted RBP17.15■□□□□ 0.34
MSH2-206ENST00000543555 CERKQ8TCT0 537 aa17.15■□□□□ 0.34
MSH2-206ENST00000543555 ERBB3P21860 1342 aa17.14■□□□□ 0.34
MSH2-206ENST00000543555 K7ELQ4 463 aaPredicted RBP17.13■□□□□ 0.33
MSH2-206ENST00000543555 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
MSH2-206ENST00000543555 DNAAF4Q8WXU2 420 aa17.13■□□□□ 0.33
MSH2-206ENST00000543555 MCM4P33991 863 aa17.13■□□□□ 0.33
MSH2-206ENST00000543555 SSH3Q8TE77 659 aa17.13■□□□□ 0.33
MSH2-206ENST00000543555 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
MSH2-206ENST00000543555 PI4KAP2A4QPH2 592 aa17.12■□□□□ 0.33
MSH2-206ENST00000543555 RABEP1Q15276 862 aa17.12■□□□□ 0.33
MSH2-206ENST00000543555 BEND3Q5T5X7 828 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms