RNA–Protein interactions for RNA: ENST00000543403.1

AP003781.1-201, humanhuman

TSL 3 BASIC

Gene AP003781.1, Length 404 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003781.1-201ENST00000543403 CLN3Q13286 438 aa6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 CTC1Q2NKJ3 1217 aa6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 ESCO1Q5FWF5 840 aa6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 C6orf118Q5T5N4 469 aa6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 MRPL14Q6P1L8 145 aaKnown RBP6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 TRIM46Q7Z4K8 759 aa6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 CNKSR1Q969H4 720 aa6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 INSM2Q96T92 566 aaPredicted RBP6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 USTQ9Y2C2 406 aa6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 HRH3Q9Y5N1 445 aa6.96□□□□□ -1.3
AP003781.1-201ENST00000543403 TNS4Q8IZW8 715 aa6.95□□□□□ -1.3
AP003781.1-201ENST00000543403 CRIPAKQ8N1N5 446 aa6.95□□□□□ -1.3
AP003781.1-201ENST00000543403 SLC4A9Q96Q91 983 aa6.95□□□□□ -1.3
AP003781.1-201ENST00000543403 PURBQ96QR8 312 aaKnown RBP6.95□□□□□ -1.3
AP003781.1-201ENST00000543403 ESYT1Q9BSJ8 1104 aa6.95□□□□□ -1.3
AP003781.1-201ENST00000543403 AAASQ9NRG9 546 aa6.95□□□□□ -1.3
AP003781.1-201ENST00000543403 M0R2N6 131 aa6.94□□□□□ -1.3
AP003781.1-201ENST00000543403 BACH1O14867 736 aa6.94□□□□□ -1.3
AP003781.1-201ENST00000543403 SPINT1O43278 529 aa6.94□□□□□ -1.3
AP003781.1-201ENST00000543403 BMP2P12643 396 aa6.94□□□□□ -1.3
AP003781.1-201ENST00000543403 GAS2L2Q8NHY3 880 aa6.94□□□□□ -1.3
AP003781.1-201ENST00000543403 NLRP3Q96P20 1036 aa6.94□□□□□ -1.3
AP003781.1-201ENST00000543403 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
AP003781.1-201ENST00000543403 DACH1Q9UI36 760 aa6.94□□□□□ -1.3
AP003781.1-201ENST00000543403 UPP2O95045 317 aa6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 PDIA4P13667 645 aaKnown RBP6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 CTSOP43234 321 aaPredicted RBP6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 SMTNP53814 917 aa6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 EPHA4P54764 986 aa6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 CENPCQ03188 943 aa6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 TLR1Q15399 786 aa6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 SWI5Q1ZZU3 235 aa6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 FOXD4L5Q5VV16 416 aaPredicted RBP6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 CLP1Q92989 425 aaKnown RBP6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 TRAIPQ9BWF2 469 aa6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 FHDC1Q9C0D6 1143 aaPredicted RBP6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 USP3Q9Y6I4 520 aa6.93□□□□□ -1.3
AP003781.1-201ENST00000543403 A6NJY4 79 aa6.92□□□□□ -1.3
AP003781.1-201ENST00000543403 PRMT3O60678 531 aa6.92□□□□□ -1.3
AP003781.1-201ENST00000543403 MTFR1Q15390 333 aa6.92□□□□□ -1.3
AP003781.1-201ENST00000543403 TBCELQ5QJ74 424 aa6.92□□□□□ -1.3
AP003781.1-201ENST00000543403 PRIMPOLQ96LW4 560 aa6.92□□□□□ -1.3
AP003781.1-201ENST00000543403 POLMQ9NP87 494 aaPredicted RBP6.92□□□□□ -1.3
AP003781.1-201ENST00000543403 FOXK2Q01167 660 aa6.91□□□□□ -1.3
AP003781.1-201ENST00000543403 SCARF1Q14162 830 aa6.91□□□□□ -1.3
AP003781.1-201ENST00000543403 OCLNQ16625 522 aa6.91□□□□□ -1.3
AP003781.1-201ENST00000543403 ZFP42Q96MM3 310 aa6.91□□□□□ -1.3
AP003781.1-201ENST00000543403 TSPAN10Q9H1Z9 355 aaPredicted RBP6.91□□□□□ -1.3
AP003781.1-201ENST00000543403 ATP13A2Q9NQ11 1180 aa6.91□□□□□ -1.3
AP003781.1-201ENST00000543403 SCHIP1Q9P0W5 487 aaPredicted RBP6.91□□□□□ -1.3
AP003781.1-201ENST00000543403 LCE2BO14633 110 aa6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 C21orf2O43822 256 aa6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 ATP2B4P23634 1241 aa6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 RNF144AP50876 292 aaPredicted RBP6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 PDE4CQ08493 712 aa6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 SLC9A9Q8IVB4 645 aa6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 SCG3Q8WXD2 468 aaKnown RBP6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 ZSCAN10Q96SZ4 725 aaPredicted RBP6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 GRIP2Q9C0E4 1043 aa6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 IQSEC3Q9UPP2 1182 aaPredicted RBP6.9□□□□□ -1.3
AP003781.1-201ENST00000543403 FIGNL2A6NMB9 653 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 CDK2AP1O14519 115 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 WEE1P30291 646 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 GPC1P35052 558 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 SCNN1AP37088 669 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 SLC27A3Q5K4L6 730 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 PHLDB3Q6NSJ2 640 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 Q6ZNB5 142 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 RNF217Q8TC41 542 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 SOS2Q07890 1332 aaPredicted RBP6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 ATAD2Q6PL18 1390 aa6.89□□□□□ -1.31
AP003781.1-201ENST00000543403 TTLL8A6PVC2 850 aa6.88□□□□□ -1.31
AP003781.1-201ENST00000543403 SSFA2P28290 1259 aa6.88□□□□□ -1.31
AP003781.1-201ENST00000543403 ZNF295-AS1Q8N0V1 137 aa6.88□□□□□ -1.31
AP003781.1-201ENST00000543403 CXXC1Q9P0U4 656 aaPredicted RBP6.88□□□□□ -1.31
AP003781.1-201ENST00000543403 IGFBP4P22692 258 aa6.87□□□□□ -1.31
AP003781.1-201ENST00000543403 FKBP5Q13451 457 aaPredicted RBP6.87□□□□□ -1.31
AP003781.1-201ENST00000543403 TMEM214Q6NUQ4 689 aaKnown RBP6.87□□□□□ -1.31
AP003781.1-201ENST00000543403 PRICKLE2Q7Z3G6 844 aa6.87□□□□□ -1.31
AP003781.1-201ENST00000543403 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
AP003781.1-201ENST00000543403 CHMP7Q8WUX9 453 aaPredicted RBP6.87□□□□□ -1.31
AP003781.1-201ENST00000543403 SOBPA7XYQ1 873 aa6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 PPP1R12BO60237 982 aaPredicted RBP6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 POU4F2Q12837 409 aa6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 SH3PXD2AQ5TCZ1 1133 aa6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 ZDHHC1Q8WTX9 485 aa6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 MKNK1Q9BUB5 465 aa6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 CABP1Q9NZU7 370 aa6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 DNMT3LQ9UJW3 386 aa6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 PARP3Q9Y6F1 533 aa6.86□□□□□ -1.31
AP003781.1-201ENST00000543403 BRD1O95696 1058 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 RHOQP17081 205 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 PHKA2P46019 1235 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 C4orf17Q53FE4 359 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 CAPN12Q6ZSI9 719 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 LYSMD3Q7Z3D4 306 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 AEBP1Q8IUX7 1158 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 NBPF15Q8N660 670 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 RHBDD1Q8TEB9 315 aa6.85□□□□□ -1.31
AP003781.1-201ENST00000543403 GMPR2Q9P2T1 348 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms