RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 SETD1AO15047 1707 aaKnown RBP15.09■□□□□ 0.01
RFC5-209ENST00000543153 MST1RQ04912 1400 aa15.09■□□□□ 0.01
RFC5-209ENST00000543153 THSD4Q6ZMP0 1018 aa15.07■□□□□ 0
RFC5-209ENST00000543153 PRPF38BQ5VTL8 546 aaKnown RBP15.06■□□□□ 0
RFC5-209ENST00000543153 LRRC59Q96AG4 307 aaKnown RBP15.06■□□□□ 0
RFC5-209ENST00000543153 HFM1A2PYH4 1435 aa15.06■□□□□ 0
RFC5-209ENST00000543153 KIF1BO60333 1816 aa15.06■□□□□ 0
RFC5-209ENST00000543153 FLIIQ13045 1269 aa15.05■□□□□ -0
RFC5-209ENST00000543153 ZBTB3Q9H5J0 574 aa15.05■□□□□ -0
RFC5-209ENST00000543153 PCDH10Q9P2E7 1040 aa15.05■□□□□ -0
RFC5-209ENST00000543153 PCDHB15Q9Y5E8 787 aa15.05■□□□□ -0
RFC5-209ENST00000543153 PPP2R2DQ66LE6 453 aa15.04■□□□□ -0
RFC5-209ENST00000543153 DDX17Q92841 729 aaKnown RBP15.04■□□□□ -0
RFC5-209ENST00000543153 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
RFC5-209ENST00000543153 SETD5Q9C0A6 1442 aa15.03■□□□□ -0
RFC5-209ENST00000543153 AFF2P51816 1311 aa15.03■□□□□ -0
RFC5-209ENST00000543153 RXRBP28702 533 aa15.03■□□□□ -0
RFC5-209ENST00000543153 C8orf37Q96NL8 207 aa15.03■□□□□ -0
RFC5-209ENST00000543153 WBP1LQ9NX94 342 aa15.03■□□□□ -0
RFC5-209ENST00000543153 PTCH1Q13635 1447 aa15.02■□□□□ -0
RFC5-209ENST00000543153 LILRB3O75022 631 aa15.02■□□□□ -0
RFC5-209ENST00000543153 NYAP1Q6ZVC0 841 aa15.02■□□□□ -0
RFC5-209ENST00000543153 NHSL1Q5SYE7 1610 aa15.02□□□□□ -0.01
RFC5-209ENST00000543153 RPGRIP1LQ68CZ1 1315 aa15.01□□□□□ -0.01
RFC5-209ENST00000543153 RFC5P40937 340 aa15.01□□□□□ -0.01
RFC5-209ENST00000543153 APLP1P51693 650 aa15.01□□□□□ -0.01
RFC5-209ENST00000543153 GUCA2AQ02747 115 aa15.01□□□□□ -0.01
RFC5-209ENST00000543153 TMEM259Q4ZIN3 620 aa15.01□□□□□ -0.01
RFC5-209ENST00000543153 HLA-CQ95604 372 aa15.01□□□□□ -0.01
RFC5-209ENST00000543153 ROBO2Q9HCK4 1378 aa15□□□□□ -0.01
RFC5-209ENST00000543153 QPCTQ16769 361 aa15□□□□□ -0.01
RFC5-209ENST00000543153 Q3C1V9 767 aa15□□□□□ -0.01
RFC5-209ENST00000543153 PUS10Q3MIT2 529 aaKnown RBP15□□□□□ -0.01
RFC5-209ENST00000543153 MORN1Q5T089 497 aa15□□□□□ -0.01
RFC5-209ENST00000543153 PCDHGC3Q9UN70 934 aa15□□□□□ -0.01
RFC5-209ENST00000543153 TIMELESSQ9UNS1 1208 aa15□□□□□ -0.01
RFC5-209ENST00000543153 PCDHB3Q9Y5E6 796 aa15□□□□□ -0.01
RFC5-209ENST00000543153 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
RFC5-209ENST00000543153 PNPLA6Q8IY17 1366 aa14.99□□□□□ -0.01
RFC5-209ENST00000543153 SPDYE5A6NIY4 337 aa14.99□□□□□ -0.01
RFC5-209ENST00000543153 C6orf229H3BNL8 230 aa14.99□□□□□ -0.01
RFC5-209ENST00000543153 ADAMTS2O95450 1211 aa14.99□□□□□ -0.01
RFC5-209ENST00000543153 MTMR2Q13614 643 aa14.99□□□□□ -0.01
RFC5-209ENST00000543153 CCDC144AA2RUR9 1427 aa14.99□□□□□ -0.01
RFC5-209ENST00000543153 HRCP23327 699 aa14.98□□□□□ -0.01
RFC5-209ENST00000543153 CABLES1Q8TDN4 633 aa14.98□□□□□ -0.01
RFC5-209ENST00000543153 NR1I2O75469 434 aa14.97□□□□□ -0.01
RFC5-209ENST00000543153 RGL3Q3MIN7 710 aa14.97□□□□□ -0.01
RFC5-209ENST00000543153 BANK1Q8NDB2 785 aa14.97□□□□□ -0.01
RFC5-209ENST00000543153 NGLY1Q96IV0 654 aa14.97□□□□□ -0.01
RFC5-209ENST00000543153 ORAI2Q96SN7 254 aa14.97□□□□□ -0.01
RFC5-209ENST00000543153 SLC27A5Q9Y2P5 690 aa14.96□□□□□ -0.01
RFC5-209ENST00000543153 PTPN5P54829 565 aa14.95□□□□□ -0.02
RFC5-209ENST00000543153 QTRT2Q9H974 415 aaKnown RBP14.95□□□□□ -0.02
RFC5-209ENST00000543153 STK26Q9P289 416 aa14.95□□□□□ -0.02
RFC5-209ENST00000543153 CDK12Q9NYV4 1490 aaPredicted RBP14.95□□□□□ -0.02
RFC5-209ENST00000543153 ESCO1Q5FWF5 840 aa14.94□□□□□ -0.02
RFC5-209ENST00000543153 RTL5Q5HYW3 569 aaPredicted RBP14.94□□□□□ -0.02
RFC5-209ENST00000543153 PPLO60437 1756 aa14.93□□□□□ -0.02
RFC5-209ENST00000543153 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
RFC5-209ENST00000543153 AP1G2O75843 785 aa14.92□□□□□ -0.02
RFC5-209ENST00000543153 RGS12O14924 1447 aa14.92□□□□□ -0.02
RFC5-209ENST00000543153 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
RFC5-209ENST00000543153 SOS2Q07890 1332 aaPredicted RBP14.92□□□□□ -0.02
RFC5-209ENST00000543153 NPHP3Q7Z494 1330 aa14.92□□□□□ -0.02
RFC5-209ENST00000543153 ADGRF5Q8IZF2 1346 aa14.92□□□□□ -0.02
RFC5-209ENST00000543153 ANKRD30BQ9BXX2 1392 aa14.91□□□□□ -0.02
RFC5-209ENST00000543153 SCUBE3Q8IX30 993 aa14.91□□□□□ -0.02
RFC5-209ENST00000543153 USP21Q9UK80 565 aa14.91□□□□□ -0.02
RFC5-209ENST00000543153 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
RFC5-209ENST00000543153 XPCQ01831 940 aaPredicted RBP14.9□□□□□ -0.02
RFC5-209ENST00000543153 HELBQ8NG08 1087 aaPredicted RBP14.9□□□□□ -0.02
RFC5-209ENST00000543153 MPHOSPH9Q99550 1183 aa14.9□□□□□ -0.02
RFC5-209ENST00000543153 SALL2Q9Y467 1007 aaPredicted RBP14.9□□□□□ -0.02
RFC5-209ENST00000543153 FMNL1O95466 1100 aaPredicted RBP14.89□□□□□ -0.03
RFC5-209ENST00000543153 BLOC1S3Q6QNY0 202 aa14.89□□□□□ -0.03
RFC5-209ENST00000543153 RETREG3Q86VR2 466 aa14.89□□□□□ -0.03
RFC5-209ENST00000543153 LRPPRCP42704 1394 aaKnown RBP14.88□□□□□ -0.03
RFC5-209ENST00000543153 TMEM132EQ6IEE7 984 aa14.88□□□□□ -0.03
RFC5-209ENST00000543153 WAPLQ7Z5K2 1190 aa14.88□□□□□ -0.03
RFC5-209ENST00000543153 SYMPKQ92797 1274 aaKnown RBP14.88□□□□□ -0.03
RFC5-209ENST00000543153 LAMC1P11047 1609 aa14.88□□□□□ -0.03
RFC5-209ENST00000543153 FOXO3O43524 673 aa14.87□□□□□ -0.03
RFC5-209ENST00000543153 MCM6Q14566 821 aa14.87□□□□□ -0.03
RFC5-209ENST00000543153 TSC1Q92574 1164 aa14.87□□□□□ -0.03
RFC5-209ENST00000543153 TRPC5Q9UL62 973 aaPredicted RBP14.87□□□□□ -0.03
RFC5-209ENST00000543153 SPATA31E1Q6ZUB1 1445 aa14.86□□□□□ -0.03
RFC5-209ENST00000543153 COPS2P61201 443 aa14.86□□□□□ -0.03
RFC5-209ENST00000543153 PRR7Q8TB68 274 aa14.86□□□□□ -0.03
RFC5-209ENST00000543153 PIK3C2GO75747 1445 aa14.85□□□□□ -0.03
RFC5-209ENST00000543153 APBB1O00213 710 aa14.85□□□□□ -0.03
RFC5-209ENST00000543153 BRICD5Q6PL45 260 aa14.85□□□□□ -0.03
RFC5-209ENST00000543153 USB1Q9BQ65 265 aaKnown RBP14.85□□□□□ -0.03
RFC5-209ENST00000543153 ATAD2Q6PL18 1390 aa14.85□□□□□ -0.03
RFC5-209ENST00000543153 TECPR2O15040 1411 aa14.84□□□□□ -0.03
RFC5-209ENST00000543153 PLEKHH1Q9ULM0 1364 aa14.84□□□□□ -0.03
RFC5-209ENST00000543153 YTHDC2Q9H6S0 1430 aaKnown RBP14.83□□□□□ -0.03
RFC5-209ENST00000543153 PXDNQ92626 1479 aa14.83□□□□□ -0.03
RFC5-209ENST00000543153 CFAP99D6REC4 459 aa14.83□□□□□ -0.04
RFC5-209ENST00000543153 RNF19BQ6ZMZ0 732 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms