RNA–Protein interactions for RNA: ENST00000543087.5

TSG101-208, Transcript of tumor susceptibility 101, humanhuman

TSL 3

Gene TSG101, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-208ENST00000543087 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
TSG101-208ENST00000543087 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
TSG101-208ENST00000543087 COL24A1Q17RW2 1714 aa17.66■□□□□ 0.42
TSG101-208ENST00000543087 KDRP35968 1356 aa17.66■□□□□ 0.42
TSG101-208ENST00000543087 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
TSG101-208ENST00000543087 VIRMAQ69YN4 1812 aaKnown RBP17.65■□□□□ 0.42
TSG101-208ENST00000543087 UBR3Q6ZT12 1888 aa17.65■□□□□ 0.42
TSG101-208ENST00000543087 ITPK1Q13572 414 aa17.65■□□□□ 0.42
TSG101-208ENST00000543087 KDM6AO15550 1401 aaPredicted RBP17.64■□□□□ 0.42
TSG101-208ENST00000543087 AMIGO3Q86WK7 504 aa17.64■□□□□ 0.41
TSG101-208ENST00000543087 NFATC2IPQ8NCF5 419 aa17.64■□□□□ 0.41
TSG101-208ENST00000543087 FLAD1Q8NFF5 587 aa17.64■□□□□ 0.41
TSG101-208ENST00000543087 NPC1L1Q9UHC9 1359 aa17.64■□□□□ 0.41
TSG101-208ENST00000543087 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
TSG101-208ENST00000543087 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
TSG101-208ENST00000543087 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.61■□□□□ 0.41
TSG101-208ENST00000543087 PTCD1O75127 700 aaKnown RBP17.61■□□□□ 0.41
TSG101-208ENST00000543087 YY1P25490 414 aa17.61■□□□□ 0.41
TSG101-208ENST00000543087 AKAP4Q5JQC9 854 aa17.61■□□□□ 0.41
TSG101-208ENST00000543087 SLC4A9Q96Q91 983 aa17.61■□□□□ 0.41
TSG101-208ENST00000543087 LGR6Q9HBX8 967 aa17.61■□□□□ 0.41
TSG101-208ENST00000543087 GNPATO15228 680 aa17.6■□□□□ 0.41
TSG101-208ENST00000543087 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
TSG101-208ENST00000543087 SSFA2P28290 1259 aa17.58■□□□□ 0.4
TSG101-208ENST00000543087 PELP1Q8IZL8 1130 aaKnown RBP17.58■□□□□ 0.4
TSG101-208ENST00000543087 NLGN2Q8NFZ4 835 aa17.58■□□□□ 0.4
TSG101-208ENST00000543087 UTRNP46939 3433 aa17.57■□□□□ 0.4
TSG101-208ENST00000543087 COL3A1P02461 1466 aaPredicted RBP17.57■□□□□ 0.4
TSG101-208ENST00000543087 MYH14Q7Z406 1995 aaKnown RBP17.57■□□□□ 0.4
TSG101-208ENST00000543087 MAP3K5Q99683 1374 aa17.57■□□□□ 0.4
TSG101-208ENST00000543087 RNMTO43148 476 aaKnown RBP17.57■□□□□ 0.4
TSG101-208ENST00000543087 GPR162Q16538 588 aa17.57■□□□□ 0.4
TSG101-208ENST00000543087 COL5A3P25940 1745 aaPredicted RBP17.56■□□□□ 0.4
TSG101-208ENST00000543087 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
TSG101-208ENST00000543087 SLC52A2Q9HAB3 445 aa17.56■□□□□ 0.4
TSG101-208ENST00000543087 CHD4Q14839 1912 aa17.56■□□□□ 0.4
TSG101-208ENST00000543087 ZNF831Q5JPB2 1677 aa17.55■□□□□ 0.4
TSG101-208ENST00000543087 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
TSG101-208ENST00000543087 TRAPPC3LQ5T215 181 aa17.55■□□□□ 0.4
TSG101-208ENST00000543087 RTCBQ9Y3I0 505 aaKnown RBP17.55■□□□□ 0.4
TSG101-208ENST00000543087 SLC39A6Q13433 755 aa17.54■□□□□ 0.4
TSG101-208ENST00000543087 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
TSG101-208ENST00000543087 GOLGB1Q14789 3259 aaKnown RBP17.52■□□□□ 0.4
TSG101-208ENST00000543087 ARHGEF1Q92888 912 aaKnown RBP17.52■□□□□ 0.4
TSG101-208ENST00000543087 RPS6KA4O75676 772 aa17.51■□□□□ 0.39
TSG101-208ENST00000543087 NUDCQ9Y266 331 aa17.51■□□□□ 0.39
TSG101-208ENST00000543087 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
TSG101-208ENST00000543087 TJP1Q07157 1748 aa17.5■□□□□ 0.39
TSG101-208ENST00000543087 U2AF1L5P0DN76 240 aaPredicted RBP17.5■□□□□ 0.39
TSG101-208ENST00000543087 PRKAR2BP31323 418 aa17.5■□□□□ 0.39
TSG101-208ENST00000543087 RFC4P35249 363 aa17.5■□□□□ 0.39
TSG101-208ENST00000543087 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
TSG101-208ENST00000543087 U2AF1Q01081 240 aaKnown RBP eCLIP17.5■□□□□ 0.39
TSG101-208ENST00000543087 DNAJC10Q8IXB1 793 aa17.5■□□□□ 0.39
TSG101-208ENST00000543087 PHACTR3Q96KR7 559 aa17.5■□□□□ 0.39
TSG101-208ENST00000543087 GNAT3A8MTJ3 354 aa17.49■□□□□ 0.39
TSG101-208ENST00000543087 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
TSG101-208ENST00000543087 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
TSG101-208ENST00000543087 CD2APQ9Y5K6 639 aa17.49■□□□□ 0.39
TSG101-208ENST00000543087 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
TSG101-208ENST00000543087 MMP10P09238 476 aa17.48■□□□□ 0.39
TSG101-208ENST00000543087 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
TSG101-208ENST00000543087 ADRA2BP18089 450 aa17.47■□□□□ 0.39
TSG101-208ENST00000543087 TEFQ10587 303 aa17.47■□□□□ 0.39
TSG101-208ENST00000543087 WWC3Q9ULE0 1092 aa17.47■□□□□ 0.39
TSG101-208ENST00000543087 MRC1P22897 1456 aa17.47■□□□□ 0.39
TSG101-208ENST00000543087 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
TSG101-208ENST00000543087 YBX3P16989 372 aaKnown RBP eCLIP17.46■□□□□ 0.396e-6■□□□□ 10.9
TSG101-208ENST00000543087 INTS5Q6P9B9 1019 aaKnown RBP17.46■□□□□ 0.39
TSG101-208ENST00000543087 NLGN1Q8N2Q7 840 aa17.46■□□□□ 0.39
TSG101-208ENST00000543087 GYS1P13807 737 aa17.45■□□□□ 0.38
TSG101-208ENST00000543087 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
TSG101-208ENST00000543087 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
TSG101-208ENST00000543087 SIPA1L3O60292 1781 aaPredicted RBP17.44■□□□□ 0.38
TSG101-208ENST00000543087 KCPQ6ZWJ8 1503 aa17.44■□□□□ 0.38
TSG101-208ENST00000543087 CYP19A1P11511 503 aaPredicted RBP17.44■□□□□ 0.38
TSG101-208ENST00000543087 DDX10Q13206 875 aaKnown RBP17.44■□□□□ 0.38
TSG101-208ENST00000543087 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
TSG101-208ENST00000543087 FCHSD2O94868 740 aa17.43■□□□□ 0.38
TSG101-208ENST00000543087 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
TSG101-208ENST00000543087 UBR2Q8IWV8 1755 aa17.43■□□□□ 0.38
TSG101-208ENST00000543087 GRIN3BO60391 1043 aa17.42■□□□□ 0.38
TSG101-208ENST00000543087 PARP3Q9Y6F1 533 aa17.42■□□□□ 0.38
TSG101-208ENST00000543087 N4BP2Q86UW6 1770 aaPredicted RBP17.42■□□□□ 0.38
TSG101-208ENST00000543087 FKBP8Q14318 412 aa17.41■□□□□ 0.38
TSG101-208ENST00000543087 ZNF790Q6PG37 636 aa17.41■□□□□ 0.38
TSG101-208ENST00000543087 ZNF496Q96IT1 587 aaPredicted RBP17.41■□□□□ 0.38
TSG101-208ENST00000543087 ZPR1O75312 459 aa17.4■□□□□ 0.38
TSG101-208ENST00000543087 CANXP27824 592 aaKnown RBP17.4■□□□□ 0.38
TSG101-208ENST00000543087 MCM10Q7L590 875 aa17.4■□□□□ 0.38
TSG101-208ENST00000543087 VSIG10Q8N0Z9 540 aa17.4■□□□□ 0.38
TSG101-208ENST00000543087 ZNF784Q8NCA9 323 aaPredicted RBP17.4■□□□□ 0.38
TSG101-208ENST00000543087 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
TSG101-208ENST00000543087 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
TSG101-208ENST00000543087 USP42Q9H9J4 1324 aaKnown RBP17.4■□□□□ 0.38
TSG101-208ENST00000543087 DLG5Q8TDM6 1919 aa17.39■□□□□ 0.37
TSG101-208ENST00000543087 BTBD11A6QL63 1104 aa17.39■□□□□ 0.37
TSG101-208ENST00000543087 KCNQ3O43525 872 aa17.39■□□□□ 0.37
TSG101-208ENST00000543087 DCTN1Q14203 1278 aa17.39■□□□□ 0.37
TSG101-208ENST00000543087 USPL1Q5W0Q7 1092 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms