RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 GMCL1Q96IK5 515 aa10.38□□□□□ -0.75
XRCC4-206ENST00000542685 GPAMQ9HCL2 828 aa10.38□□□□□ -0.75
XRCC4-206ENST00000542685 F11P03951 625 aa10.37□□□□□ -0.75
XRCC4-206ENST00000542685 INHAP05111 366 aa10.37□□□□□ -0.75
XRCC4-206ENST00000542685 EML3Q32P44 896 aa10.37□□□□□ -0.75
XRCC4-206ENST00000542685 C4orf17Q53FE4 359 aa10.37□□□□□ -0.75
XRCC4-206ENST00000542685 FOXR1Q6PIV2 292 aa10.37□□□□□ -0.75
XRCC4-206ENST00000542685 GTPBP3Q969Y2 492 aaKnown RBP10.37□□□□□ -0.75
XRCC4-206ENST00000542685 GAS6Q14393 721 aa10.36□□□□□ -0.75
XRCC4-206ENST00000542685 CLUAP1Q96AJ1 413 aa10.36□□□□□ -0.75
XRCC4-206ENST00000542685 SERTAD1Q9UHV2 236 aa10.36□□□□□ -0.75
XRCC4-206ENST00000542685 DEPDC4Q8N2C3 294 aa10.35□□□□□ -0.75
XRCC4-206ENST00000542685 ADAMTS19Q8TE59 1207 aa10.35□□□□□ -0.75
XRCC4-206ENST00000542685 NUCKS1Q9H1E3 243 aaKnown RBP10.35□□□□□ -0.75
XRCC4-206ENST00000542685 NCOA4Q13772 614 aa10.34□□□□□ -0.75
XRCC4-206ENST00000542685 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
XRCC4-206ENST00000542685 PPARGC1BQ86YN6 1023 aaKnown RBP10.34□□□□□ -0.75
XRCC4-206ENST00000542685 NFATC2IPQ8NCF5 419 aa10.34□□□□□ -0.75
XRCC4-206ENST00000542685 NOD1Q9Y239 953 aa10.34□□□□□ -0.75
XRCC4-206ENST00000542685 A0A1B0GTH6 734 aa10.33□□□□□ -0.76
XRCC4-206ENST00000542685 ADAMTS2O95450 1211 aa10.33□□□□□ -0.76
XRCC4-206ENST00000542685 SLURP2P0DP57 97 aa10.33□□□□□ -0.76
XRCC4-206ENST00000542685 ZNF385CQ66K41 422 aaPredicted RBP10.33□□□□□ -0.76
XRCC4-206ENST00000542685 SVOPQ8N4V2 548 aa10.33□□□□□ -0.76
XRCC4-206ENST00000542685 RHBDD1Q8TEB9 315 aa10.33□□□□□ -0.76
XRCC4-206ENST00000542685 WHAMMQ8TF30 809 aa10.33□□□□□ -0.76
XRCC4-206ENST00000542685 PCDHGA11Q9Y5H2 935 aa10.33□□□□□ -0.76
XRCC4-206ENST00000542685 USP17L5A8MUK1 530 aa10.32□□□□□ -0.76
XRCC4-206ENST00000542685 TMEM229AB2RXF0 380 aa10.32□□□□□ -0.76
XRCC4-206ENST00000542685 SMTNP53814 917 aa10.32□□□□□ -0.76
XRCC4-206ENST00000542685 GTF2IP78347 998 aa10.32□□□□□ -0.76
XRCC4-206ENST00000542685 TRERF1Q96PN7 1200 aa10.32□□□□□ -0.76
XRCC4-206ENST00000542685 PLA2G4AP47712 749 aa10.31□□□□□ -0.76
XRCC4-206ENST00000542685 SRSF11Q05519 484 aaKnown RBP10.31□□□□□ -0.76
XRCC4-206ENST00000542685 PSME1Q06323 249 aa10.31□□□□□ -0.76
XRCC4-206ENST00000542685 RUBCNLQ9H714 662 aa10.31□□□□□ -0.76
XRCC4-206ENST00000542685 LZTS3O60299 673 aaPredicted RBP10.3□□□□□ -0.76
XRCC4-206ENST00000542685 CSB-PGBD3P0DP91 1061 aa10.3□□□□□ -0.76
XRCC4-206ENST00000542685 MSX1P28360 303 aa10.3□□□□□ -0.76
XRCC4-206ENST00000542685 PROSER2Q86WR7 435 aaPredicted RBP10.3□□□□□ -0.76
XRCC4-206ENST00000542685 PGBD3Q8N328 593 aa10.3□□□□□ -0.76
XRCC4-206ENST00000542685 MBIPQ9NS73 344 aa10.3□□□□□ -0.76
XRCC4-206ENST00000542685 THBS1P07996 1170 aa10.29□□□□□ -0.76
XRCC4-206ENST00000542685 TBC1D9Q6ZT07 1266 aa10.29□□□□□ -0.76
XRCC4-206ENST00000542685 UCN2Q96RP3 112 aa10.28□□□□□ -0.76
XRCC4-206ENST00000542685 NIFKQ9BYG3 293 aaKnown RBP10.28□□□□□ -0.76
XRCC4-206ENST00000542685 ADAMTS8Q9UP79 889 aa10.28□□□□□ -0.76
XRCC4-206ENST00000542685 IGF1RP08069 1367 aa10.27□□□□□ -0.76
XRCC4-206ENST00000542685 A6NJY4 79 aa10.27□□□□□ -0.77
XRCC4-206ENST00000542685 LYPD4Q6UWN0 246 aa10.27□□□□□ -0.77
XRCC4-206ENST00000542685 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.27□□□□□ -0.77
XRCC4-206ENST00000542685 AIDAQ96BJ3 306 aa10.27□□□□□ -0.77
XRCC4-206ENST00000542685 SLC4A9Q96Q91 983 aa10.27□□□□□ -0.77
XRCC4-206ENST00000542685 USP17L3A6NCW0 530 aa10.26□□□□□ -0.77
XRCC4-206ENST00000542685 USP17L4A6NCW7 530 aa10.26□□□□□ -0.77
XRCC4-206ENST00000542685 MX2P20592 715 aa10.26□□□□□ -0.77
XRCC4-206ENST00000542685 USP17L2Q6R6M4 530 aa10.26□□□□□ -0.77
XRCC4-206ENST00000542685 USP17L1Q7RTZ2 530 aa10.26□□□□□ -0.77
XRCC4-206ENST00000542685 FNBP4Q8N3X1 1017 aaPredicted RBP10.26□□□□□ -0.77
XRCC4-206ENST00000542685 BACH1O14867 736 aa10.25□□□□□ -0.77
XRCC4-206ENST00000542685 EFHC2Q5JST6 749 aa10.25□□□□□ -0.77
XRCC4-206ENST00000542685 GLMNQ92990 594 aa10.25□□□□□ -0.77
XRCC4-206ENST00000542685 ZNF358Q9NW07 568 aa10.25□□□□□ -0.77
XRCC4-206ENST00000542685 USP3Q9Y6I4 520 aa10.25□□□□□ -0.77
XRCC4-206ENST00000542685 CDK2AP1O14519 115 aa10.24□□□□□ -0.77
XRCC4-206ENST00000542685 ATP9BO43861 1147 aa10.24□□□□□ -0.77
XRCC4-206ENST00000542685 ARHGEF15O94989 841 aa10.24□□□□□ -0.77
XRCC4-206ENST00000542685 CELA2BP08218 269 aaPredicted RBP10.24□□□□□ -0.77
XRCC4-206ENST00000542685 MAP3K10Q02779 954 aa10.24□□□□□ -0.77
XRCC4-206ENST00000542685 MTFR1Q15390 333 aa10.24□□□□□ -0.77
XRCC4-206ENST00000542685 TRIM50Q86XT4 487 aa10.24□□□□□ -0.77
XRCC4-206ENST00000542685 CABP1Q9NZU7 370 aa10.24□□□□□ -0.77
XRCC4-206ENST00000542685 LBRQ14739 615 aaKnown RBP10.23□□□□□ -0.77
XRCC4-206ENST00000542685 PLEKHM2Q8IWE5 1019 aa10.23□□□□□ -0.77
XRCC4-206ENST00000542685 CFHR5Q9BXR6 569 aa10.23□□□□□ -0.77
XRCC4-206ENST00000542685 NSFL1CQ9UNZ2 370 aaKnown RBP10.23□□□□□ -0.77
XRCC4-206ENST00000542685 IQSEC3Q9UPP2 1182 aaPredicted RBP10.23□□□□□ -0.77
XRCC4-206ENST00000542685 UBAP2LQ14157 1087 aaKnown RBP10.22□□□□□ -0.77
XRCC4-206ENST00000542685 CRISPLD1Q9H336 500 aa10.22□□□□□ -0.77
XRCC4-206ENST00000542685 PHF24Q9UPV7 400 aa10.22□□□□□ -0.77
XRCC4-206ENST00000542685 PARP3Q9Y6F1 533 aa10.22□□□□□ -0.77
XRCC4-206ENST00000542685 ATP4AP20648 1035 aa10.21□□□□□ -0.77
XRCC4-206ENST00000542685 ATP1A2P50993 1020 aa10.21□□□□□ -0.77
XRCC4-206ENST00000542685 CLDN10P78369 228 aa10.21□□□□□ -0.77
XRCC4-206ENST00000542685 NBPF1Q3BBV0 1214 aa10.21□□□□□ -0.77
XRCC4-206ENST00000542685 ARSJQ5FYB0 599 aaPredicted RBP10.21□□□□□ -0.77
XRCC4-206ENST00000542685 ZNF295-AS1Q8N0V1 137 aa10.21□□□□□ -0.77
XRCC4-206ENST00000542685 TPCN2Q8NHX9 752 aa10.21□□□□□ -0.77
XRCC4-206ENST00000542685 MKRN1Q9UHC7 482 aaKnown RBP10.21□□□□□ -0.77
XRCC4-206ENST00000542685 KIAA1024Q9UPX6 916 aa10.21□□□□□ -0.77
XRCC4-206ENST00000542685 ZBTB7BO15156 539 aaPredicted RBP10.2□□□□□ -0.78
XRCC4-206ENST00000542685 TBCELQ5QJ74 424 aa10.2□□□□□ -0.78
XRCC4-206ENST00000542685 CCDC102BQ68D86 513 aa10.2□□□□□ -0.78
XRCC4-206ENST00000542685 C1orf216Q8TAB5 229 aa10.2□□□□□ -0.78
XRCC4-206ENST00000542685 ACDQ96AP0 544 aa10.2□□□□□ -0.78
XRCC4-206ENST00000542685 ABHD17AQ96GS6 310 aa10.2□□□□□ -0.78
XRCC4-206ENST00000542685 DNAAF2Q9NVR5 837 aaKnown RBP10.2□□□□□ -0.78
XRCC4-206ENST00000542685 SCHIP1Q9P0W5 487 aaPredicted RBP10.2□□□□□ -0.78
XRCC4-206ENST00000542685 TFIP11Q9UBB9 837 aaKnown RBP10.2□□□□□ -0.78
XRCC4-206ENST00000542685 A6NJR5 290 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms