RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 RNMTO43148 476 aaKnown RBP20.69■□□□□ 0.9
ECHDC2-223ENST00000542552 ZBTB7AO95365 584 aa20.69■□□□□ 0.9
ECHDC2-223ENST00000542552 PHACTR3Q96KR7 559 aa20.69■□□□□ 0.9
ECHDC2-223ENST00000542552 TFCP2L1Q9NZI6 479 aa20.69■□□□□ 0.9
ECHDC2-223ENST00000542552 C4BP0C0L5 1744 aa20.69■□□□□ 0.9
ECHDC2-223ENST00000542552 FCHSD2O94868 740 aa20.68■□□□□ 0.9
ECHDC2-223ENST00000542552 U2AF1L5P0DN76 240 aaPredicted RBP20.68■□□□□ 0.9
ECHDC2-223ENST00000542552 PRKAR2BP31323 418 aa20.68■□□□□ 0.9
ECHDC2-223ENST00000542552 U2AF1Q01081 240 aaKnown RBP eCLIP20.68■□□□□ 0.9
ECHDC2-223ENST00000542552 MTFR1LQ9H019 292 aa20.68■□□□□ 0.9
ECHDC2-223ENST00000542552 PTGER2P43116 358 aa20.67■□□□□ 0.9
ECHDC2-223ENST00000542552 ITPK1Q13572 414 aa20.67■□□□□ 0.9
ECHDC2-223ENST00000542552 GAS2L2Q8NHY3 880 aa20.67■□□□□ 0.9
ECHDC2-223ENST00000542552 SLC4A9Q96Q91 983 aa20.67■□□□□ 0.9
ECHDC2-223ENST00000542552 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
ECHDC2-223ENST00000542552 COL24A1Q17RW2 1714 aa20.67■□□□□ 0.9
ECHDC2-223ENST00000542552 SLC16A10Q8TF71 515 aa20.66■□□□□ 0.9
ECHDC2-223ENST00000542552 SGIP1Q9BQI5 828 aa20.66■□□□□ 0.9
ECHDC2-223ENST00000542552 MAP3K5Q99683 1374 aa20.65■□□□□ 0.9
ECHDC2-223ENST00000542552 ATP6V1AP38606 617 aa20.65■□□□□ 0.9
ECHDC2-223ENST00000542552 LINC00116Q8NCU8 138 aa20.65■□□□□ 0.9
ECHDC2-223ENST00000542552 ATF5Q9Y2D1 282 aaPredicted RBP20.65■□□□□ 0.9
ECHDC2-223ENST00000542552 UBR3Q6ZT12 1888 aa20.64■□□□□ 0.9
ECHDC2-223ENST00000542552 GNAT3A8MTJ3 354 aa20.64■□□□□ 0.89
ECHDC2-223ENST00000542552 COL5A3P25940 1745 aaPredicted RBP20.64■□□□□ 0.89
ECHDC2-223ENST00000542552 CICQ96RK0 1608 aaPredicted RBP20.64■□□□□ 0.89
ECHDC2-223ENST00000542552 MYBBP1AQ9BQG0 1328 aaKnown RBP20.63■□□□□ 0.89
ECHDC2-223ENST00000542552 COL23A1Q86Y22 540 aaPredicted RBP20.63■□□□□ 0.89
ECHDC2-223ENST00000542552 IL17REQ8NFR9 667 aa20.63■□□□□ 0.89
ECHDC2-223ENST00000542552 RBM42Q9BTD8 480 aaKnown RBP20.62■□□□□ 0.89
ECHDC2-223ENST00000542552 SIPA1L3O60292 1781 aaPredicted RBP20.62■□□□□ 0.89
ECHDC2-223ENST00000542552 AMIGO3Q86WK7 504 aa20.61■□□□□ 0.89
ECHDC2-223ENST00000542552 FLAD1Q8NFF5 587 aa20.61■□□□□ 0.89
ECHDC2-223ENST00000542552 AK7Q96M32 723 aa20.61■□□□□ 0.89
ECHDC2-223ENST00000542552 CEMIPQ8WUJ3 1361 aa20.6■□□□□ 0.89
ECHDC2-223ENST00000542552 PRKRIP1Q9H875 184 aaPredicted RBP20.6■□□□□ 0.89
ECHDC2-223ENST00000542552 TJP1Q07157 1748 aa20.59■□□□□ 0.89
ECHDC2-223ENST00000542552 PTCD1O75127 700 aaKnown RBP20.59■□□□□ 0.89
ECHDC2-223ENST00000542552 PLEKHF1Q96S99 279 aa20.59■□□□□ 0.89
ECHDC2-223ENST00000542552 PPP1R1BQ9UD71 204 aaPredicted RBP20.59■□□□□ 0.89
ECHDC2-223ENST00000542552 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.89
ECHDC2-223ENST00000542552 RC3H1Q5TC82 1133 aaKnown RBP20.58■□□□□ 0.89
ECHDC2-223ENST00000542552 UBR2Q8IWV8 1755 aa20.58■□□□□ 0.89
ECHDC2-223ENST00000542552 KCPQ6ZWJ8 1503 aa20.58■□□□□ 0.88
ECHDC2-223ENST00000542552 MYH14Q7Z406 1995 aaKnown RBP20.57■□□□□ 0.88
ECHDC2-223ENST00000542552 SSFA2P28290 1259 aa20.57■□□□□ 0.88
ECHDC2-223ENST00000542552 SLC39A6Q13433 755 aa20.57■□□□□ 0.88
ECHDC2-223ENST00000542552 CNTNAP4Q9C0A0 1308 aa20.56■□□□□ 0.88
ECHDC2-223ENST00000542552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.56■□□□□ 0.88
ECHDC2-223ENST00000542552 GNPATO15228 680 aa20.55■□□□□ 0.88
ECHDC2-223ENST00000542552 MSH5O43196 834 aa20.55■□□□□ 0.88
ECHDC2-223ENST00000542552 HTATSF1O43719 755 aaKnown RBP20.55■□□□□ 0.88
ECHDC2-223ENST00000542552 TEFQ10587 303 aa20.55■□□□□ 0.88
ECHDC2-223ENST00000542552 SMIM5Q71RC9 77 aa20.55■□□□□ 0.88
ECHDC2-223ENST00000542552 ARXQ96QS3 562 aa20.54■□□□□ 0.88
ECHDC2-223ENST00000542552 DLG5Q8TDM6 1919 aa20.54■□□□□ 0.88
ECHDC2-223ENST00000542552 PNNQ9H307 717 aaKnown RBP20.53■□□□□ 0.88
ECHDC2-223ENST00000542552 PHF14O94880 888 aa20.52■□□□□ 0.88
ECHDC2-223ENST00000542552 VSIG10Q8N0Z9 540 aa20.52■□□□□ 0.88
ECHDC2-223ENST00000542552 RPS6KA4O75676 772 aa20.51■□□□□ 0.87
ECHDC2-223ENST00000542552 POLD1P28340 1107 aa20.51■□□□□ 0.87
ECHDC2-223ENST00000542552 ZNF790Q6PG37 636 aa20.51■□□□□ 0.87
ECHDC2-223ENST00000542552 MCM10Q7L590 875 aa20.51■□□□□ 0.87
ECHDC2-223ENST00000542552 DNAJC10Q8IXB1 793 aa20.51■□□□□ 0.87
ECHDC2-223ENST00000542552 RTF1Q92541 710 aaKnown RBP20.51■□□□□ 0.87
ECHDC2-223ENST00000542552 RTCBQ9Y3I0 505 aaKnown RBP20.51■□□□□ 0.87
ECHDC2-223ENST00000542552 NEFMP07197 916 aa20.5■□□□□ 0.87
ECHDC2-223ENST00000542552 ADRA2BP18089 450 aa20.5■□□□□ 0.87
ECHDC2-223ENST00000542552 CRKLP46109 303 aaKnown RBP20.5■□□□□ 0.87
ECHDC2-223ENST00000542552 NFE2L2Q16236 605 aa20.5■□□□□ 0.87
ECHDC2-223ENST00000542552 INTS5Q6P9B9 1019 aaKnown RBP20.5■□□□□ 0.87
ECHDC2-223ENST00000542552 FHDC1Q9C0D6 1143 aaPredicted RBP20.5■□□□□ 0.87
ECHDC2-223ENST00000542552 CYP19A1P11511 503 aaPredicted RBP20.49■□□□□ 0.87
ECHDC2-223ENST00000542552 TRAPPC3LQ5T215 181 aa20.49■□□□□ 0.87
ECHDC2-223ENST00000542552 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
ECHDC2-223ENST00000542552 DCTN1Q14203 1278 aa20.48■□□□□ 0.87
ECHDC2-223ENST00000542552 TTC5Q8N0Z6 440 aa20.48■□□□□ 0.87
ECHDC2-223ENST00000542552 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
ECHDC2-223ENST00000542552 SYT17Q9BSW7 474 aa20.48■□□□□ 0.87
ECHDC2-223ENST00000542552 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
ECHDC2-223ENST00000542552 BTBD11A6QL63 1104 aa20.47■□□□□ 0.87
ECHDC2-223ENST00000542552 ARHGEF1Q92888 912 aaKnown RBP20.47■□□□□ 0.87
ECHDC2-223ENST00000542552 MAPK8IP3Q9UPT6 1336 aa20.47■□□□□ 0.87
ECHDC2-223ENST00000542552 CCDC87Q9NVE4 849 aa20.46■□□□□ 0.87
ECHDC2-223ENST00000542552 UTRNP46939 3433 aa20.46■□□□□ 0.87
ECHDC2-223ENST00000542552 HEG1Q9ULI3 1381 aa20.46■□□□□ 0.87
ECHDC2-223ENST00000542552 KCNQ3O43525 872 aa20.45■□□□□ 0.86
ECHDC2-223ENST00000542552 GOLGB1Q14789 3259 aaKnown RBP20.45■□□□□ 0.86
ECHDC2-223ENST00000542552 FMNL2Q96PY5 1086 aa20.44■□□□□ 0.86
ECHDC2-223ENST00000542552 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
ECHDC2-223ENST00000542552 TAF7Q15545 349 aaPredicted RBP20.43■□□□□ 0.86
ECHDC2-223ENST00000542552 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
ECHDC2-223ENST00000542552 ADAMTS8Q9UP79 889 aa20.43■□□□□ 0.86
ECHDC2-223ENST00000542552 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
ECHDC2-223ENST00000542552 GYS1P13807 737 aa20.42■□□□□ 0.86
ECHDC2-223ENST00000542552 RFC4P35249 363 aa20.42■□□□□ 0.86
ECHDC2-223ENST00000542552 STARD3NLO95772 234 aa20.41■□□□□ 0.86
ECHDC2-223ENST00000542552 TMPOP42166 694 aaKnown RBP20.41■□□□□ 0.86
ECHDC2-223ENST00000542552 RUNDC1Q96C34 613 aa20.41■□□□□ 0.86
ECHDC2-223ENST00000542552 ZBTB1Q9Y2K1 713 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms