RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
LDHA-220ENST00000542179 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
LDHA-220ENST00000542179 RGPD2P0DJD1 1756 aa12.04□□□□□ -0.48
LDHA-220ENST00000542179 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
LDHA-220ENST00000542179 FAM83GA6ND36 823 aa12.02□□□□□ -0.49
LDHA-220ENST00000542179 AMOTQ4VCS5 1084 aa12.02□□□□□ -0.49
LDHA-220ENST00000542179 USHBP1Q8N6Y0 703 aa12.02□□□□□ -0.49
LDHA-220ENST00000542179 WDR17Q8IZU2 1322 aa12.02□□□□□ -0.49
LDHA-220ENST00000542179 COL5A2P05997 1499 aaPredicted RBP12.02□□□□□ -0.49
LDHA-220ENST00000542179 COL14A1Q05707 1796 aaKnown RBP12.01□□□□□ -0.49
LDHA-220ENST00000542179 ZNF853P0CG23 659 aa12.01□□□□□ -0.49
LDHA-220ENST00000542179 PLEKHO1Q53GL0 409 aaPredicted RBP12.01□□□□□ -0.49
LDHA-220ENST00000542179 IFT57Q9NWB7 429 aa12.01□□□□□ -0.49
LDHA-220ENST00000542179 GNAT3A8MTJ3 354 aa12□□□□□ -0.49
LDHA-220ENST00000542179 CT47B1P0C2W7 299 aaPredicted RBP12□□□□□ -0.49
LDHA-220ENST00000542179 CSB-PGBD3P0DP91 1061 aa12□□□□□ -0.49
LDHA-220ENST00000542179 GNAI1P63096 354 aa12□□□□□ -0.49
LDHA-220ENST00000542179 CFAP44Q96MT7 982 aa12□□□□□ -0.49
LDHA-220ENST00000542179 NLRP2Q9NX02 1062 aa12□□□□□ -0.49
LDHA-220ENST00000542179 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.49
LDHA-220ENST00000542179 SRCAPQ6ZRS2 3230 aa11.99□□□□□ -0.49
LDHA-220ENST00000542179 RTF1Q92541 710 aaKnown RBP11.99□□□□□ -0.49
LDHA-220ENST00000542179 FANCIQ9NVI1 1328 aa11.99□□□□□ -0.49
LDHA-220ENST00000542179 CRB1P82279 1406 aa11.98□□□□□ -0.49
LDHA-220ENST00000542179 MAP3K5Q99683 1374 aa11.98□□□□□ -0.49
LDHA-220ENST00000542179 JCADQ9P266 1359 aa11.98□□□□□ -0.49
LDHA-220ENST00000542179 RIOK3O14730 519 aaKnown RBP11.98□□□□□ -0.49
LDHA-220ENST00000542179 NEFLP07196 543 aa11.98□□□□□ -0.49
LDHA-220ENST00000542179 RAPGEF4Q8WZA2 1011 aa11.98□□□□□ -0.49
LDHA-220ENST00000542179 CARD10Q9BWT7 1032 aa11.98□□□□□ -0.49
LDHA-220ENST00000542179 CHL1O00533 1208 aa11.97□□□□□ -0.49
LDHA-220ENST00000542179 TATP17735 454 aaPredicted RBP11.97□□□□□ -0.49
LDHA-220ENST00000542179 EVA1CP58658 441 aa11.97□□□□□ -0.49
LDHA-220ENST00000542179 AKAP4Q5JQC9 854 aa11.97□□□□□ -0.49
LDHA-220ENST00000542179 ERICH6BQ5W0A0 696 aa11.97□□□□□ -0.49
LDHA-220ENST00000542179 TOM1L2Q6ZVM7 507 aa11.97□□□□□ -0.49
LDHA-220ENST00000542179 THUMPD2Q9BTF0 503 aaKnown RBP11.97□□□□□ -0.49
LDHA-220ENST00000542179 BABAM1Q9NWV8 329 aa11.97□□□□□ -0.49
LDHA-220ENST00000542179 LRRC37A3O60309 1634 aa11.97□□□□□ -0.49
LDHA-220ENST00000542179 DCTN1Q14203 1278 aa11.96□□□□□ -0.49
LDHA-220ENST00000542179 MCM10Q7L590 875 aa11.96□□□□□ -0.49
LDHA-220ENST00000542179 IL17REQ8NFR9 667 aa11.96□□□□□ -0.49
LDHA-220ENST00000542179 BTG4Q9NY30 223 aa11.96□□□□□ -0.49
LDHA-220ENST00000542179 OVOS2A0A0G2JMS6 1433 aa11.95□□□□□ -0.5
LDHA-220ENST00000542179 CEMIPQ8WUJ3 1361 aa11.95□□□□□ -0.5
LDHA-220ENST00000542179 RRP1P56182 461 aaKnown RBP11.95□□□□□ -0.5
LDHA-220ENST00000542179 EXOSC9Q06265 439 aaKnown RBP11.95□□□□□ -0.5
LDHA-220ENST00000542179 LARP1Q6PKG0 1096 aaKnown RBP11.95□□□□□ -0.5
LDHA-220ENST00000542179 TSR2Q969E8 191 aaKnown RBP11.95□□□□□ -0.5
LDHA-220ENST00000542179 ZNF428Q96B54 188 aa11.95□□□□□ -0.5
LDHA-220ENST00000542179 L3MBTL3Q96JM7 780 aaPredicted RBP11.95□□□□□ -0.5
LDHA-220ENST00000542179 MBIPQ9NS73 344 aa11.95□□□□□ -0.5
LDHA-220ENST00000542179 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
LDHA-220ENST00000542179 SPG7Q9UQ90 795 aa11.95□□□□□ -0.5
LDHA-220ENST00000542179 MEGF6O75095 1541 aa11.95□□□□□ -0.5
LDHA-220ENST00000542179 PKD1L3Q7Z443 1732 aa11.94□□□□□ -0.5
LDHA-220ENST00000542179 ADAMTS7Q9UKP4 1686 aa11.94□□□□□ -0.5
LDHA-220ENST00000542179 SPATA31A6Q5VVP1 1343 aa11.94□□□□□ -0.5
LDHA-220ENST00000542179 C1orf141Q5JVX7 400 aa11.94□□□□□ -0.5
LDHA-220ENST00000542179 ZNF530Q6P9A1 599 aaPredicted RBP11.94□□□□□ -0.5
LDHA-220ENST00000542179 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
LDHA-220ENST00000542179 RARSP54136 660 aaKnown RBP11.93□□□□□ -0.5
LDHA-220ENST00000542179 SLAIN1Q8ND83 568 aa11.93□□□□□ -0.5
LDHA-220ENST00000542179 STRN4Q9NRL3 753 aa11.93□□□□□ -0.5
LDHA-220ENST00000542179 LAS1LQ9Y4W2 734 aaKnown RBP11.93□□□□□ -0.5
LDHA-220ENST00000542179 NWD2Q9ULI1 1742 aa11.93□□□□□ -0.5
LDHA-220ENST00000542179 PLCH1Q4KWH8 1693 aa11.93□□□□□ -0.5
LDHA-220ENST00000542179 SLIT2O94813 1529 aa11.92□□□□□ -0.5
LDHA-220ENST00000542179 ADAMTS2O95450 1211 aa11.92□□□□□ -0.5
LDHA-220ENST00000542179 IL2RBP14784 551 aa11.92□□□□□ -0.5
LDHA-220ENST00000542179 TAF7Q15545 349 aaPredicted RBP11.92□□□□□ -0.5
LDHA-220ENST00000542179 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
LDHA-220ENST00000542179 PDCD7Q8N8D1 485 aaKnown RBP11.92□□□□□ -0.5
LDHA-220ENST00000542179 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.92□□□□□ -0.5
LDHA-220ENST00000542179 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.92□□□□□ -0.5
LDHA-220ENST00000542179 NRAPQ86VF7 1730 aa11.91□□□□□ -0.5
LDHA-220ENST00000542179 RNMTO43148 476 aaKnown RBP11.91□□□□□ -0.5
LDHA-220ENST00000542179 VAMP4O75379 141 aa11.91□□□□□ -0.5
LDHA-220ENST00000542179 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
LDHA-220ENST00000542179 PHKG2P15735 406 aa11.91□□□□□ -0.5
LDHA-220ENST00000542179 ALDH1L2Q3SY69 923 aa11.91□□□□□ -0.5
LDHA-220ENST00000542179 NUTM2BA6NNL0 878 aaPredicted RBP11.9□□□□□ -0.5
LDHA-220ENST00000542179 NUTM2EB1AL46 878 aaPredicted RBP11.9□□□□□ -0.5
LDHA-220ENST00000542179 BCAR3O75815 825 aa11.9□□□□□ -0.5
LDHA-220ENST00000542179 HSPA1LP34931 641 aa11.9□□□□□ -0.5
LDHA-220ENST00000542179 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
LDHA-220ENST00000542179 MPRIPQ6WCQ1 1025 aa11.9□□□□□ -0.5
LDHA-220ENST00000542179 NUTM2AQ8IVF1 878 aaPredicted RBP11.9□□□□□ -0.5
LDHA-220ENST00000542179 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
LDHA-220ENST00000542179 LGR6Q9HBX8 967 aa11.9□□□□□ -0.5
LDHA-220ENST00000542179 THRAP3Q9Y2W1 955 aaKnown RBP11.9□□□□□ -0.5
LDHA-220ENST00000542179 SOS1Q07889 1333 aaPredicted RBP11.89□□□□□ -0.51
LDHA-220ENST00000542179 PCDH11XQ9BZA7 1347 aa11.89□□□□□ -0.51
LDHA-220ENST00000542179 PCDH11YQ9BZA8 1340 aa11.89□□□□□ -0.51
LDHA-220ENST00000542179 DISP2A7MBM2 1401 aa11.89□□□□□ -0.51
LDHA-220ENST00000542179 CYP27B1O15528 508 aa11.89□□□□□ -0.51
LDHA-220ENST00000542179 NKX1-1Q15270 411 aaPredicted RBP11.89□□□□□ -0.51
LDHA-220ENST00000542179 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
LDHA-220ENST00000542179 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
LDHA-220ENST00000542179 RNF25Q96BH1 459 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms