RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 NGDNQ8NEJ9 315 aaKnown RBP8.28□□□□□ -1.08
NKRF-204ENST00000542113 SYAP1Q96A49 352 aaPredicted RBP8.28□□□□□ -1.08
NKRF-204ENST00000542113 INTS4Q96HW7 963 aaKnown RBP8.28□□□□□ -1.08
NKRF-204ENST00000542113 LRRC37A3O60309 1634 aa8.28□□□□□ -1.08
NKRF-204ENST00000542113 MX1P20591 662 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 GAS2L3Q86XJ1 694 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 RIMS1Q86UR5 1692 aaKnown RBP8.27□□□□□ -1.09
NKRF-204ENST00000542113 GNAT3A8MTJ3 354 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 APBB1O00213 710 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 SMARCA5O60264 1052 aaPredicted RBP8.27□□□□□ -1.09
NKRF-204ENST00000542113 MSNP26038 577 aaKnown RBP8.27□□□□□ -1.09
NKRF-204ENST00000542113 ATP8B2P98198 1209 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 FLIIQ13045 1269 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 FKBP5Q13451 457 aaPredicted RBP8.27□□□□□ -1.09
NKRF-204ENST00000542113 OTUD7AQ8TE49 926 aaPredicted RBP8.27□□□□□ -1.09
NKRF-204ENST00000542113 LMBRD1Q9NUN5 540 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 RAB11FIP3O75154 756 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 NCLP19338 710 aaKnown RBP8.27□□□□□ -1.09
NKRF-204ENST00000542113 ZSCAN30Q86W11 494 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 ESYT1Q9BSJ8 1104 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 STAP2Q9UGK3 403 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 TBX22Q9Y458 520 aa8.27□□□□□ -1.09
NKRF-204ENST00000542113 TPM2P07951 284 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 IL17RAQ96F46 866 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 CACNA1FO60840 1977 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 MAP3K5Q99683 1374 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 PHF14O94880 888 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 ZSCAN23Q3MJ62 389 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 GLIPR1L2Q4G1C9 344 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 CAVIN1Q6NZI2 390 aaKnown RBP8.26□□□□□ -1.09
NKRF-204ENST00000542113 SLIT1O75093 1534 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 FAM208AQ9UK61 1670 aaKnown RBP8.26□□□□□ -1.09
NKRF-204ENST00000542113 SALL3Q9BXA9 1300 aa8.26□□□□□ -1.09
NKRF-204ENST00000542113 N4BP2Q86UW6 1770 aaPredicted RBP8.25□□□□□ -1.09
NKRF-204ENST00000542113 NEK4P51957 841 aa8.25□□□□□ -1.09
NKRF-204ENST00000542113 HSP90AB4PQ58FF6 505 aa8.25□□□□□ -1.09
NKRF-204ENST00000542113 CUL4AQ13619 759 aa8.25□□□□□ -1.09
NKRF-204ENST00000542113 HDAC5Q9UQL6 1122 aa8.25□□□□□ -1.09
NKRF-204ENST00000542113 HOXB7P09629 217 aa8.25□□□□□ -1.09
NKRF-204ENST00000542113 UBTFL1P0CB47 393 aaPredicted RBP8.25□□□□□ -1.09
NKRF-204ENST00000542113 KLHL34Q8N239 644 aa8.25□□□□□ -1.09
NKRF-204ENST00000542113 EYA1Q99502 592 aa8.25□□□□□ -1.09
NKRF-204ENST00000542113 ARHGAP23Q9P227 1491 aa8.25□□□□□ -1.09
NKRF-204ENST00000542113 USP54Q70EL1 1684 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 TRIM6-TRIM34B2RNG4 842 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 F6X3S4 739 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 TAF7Q15545 349 aaPredicted RBP8.24□□□□□ -1.09
NKRF-204ENST00000542113 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.24□□□□□ -1.09
NKRF-204ENST00000542113 G2E3Q7L622 706 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 TMX3Q96JJ7 454 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 EXOC6BQ9Y2D4 811 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 AMOTL2Q9Y2J4 779 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 CHMLP26374 656 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 MCM5P33992 734 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 ANO2Q9NQ90 1003 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 SOX12O15370 315 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 PRPF40AO75400 957 aaKnown RBP8.24□□□□□ -1.09
NKRF-204ENST00000542113 LRSAM1Q6UWE0 723 aa8.24□□□□□ -1.09
NKRF-204ENST00000542113 BRD1O95696 1058 aa8.23□□□□□ -1.09
NKRF-204ENST00000542113 TERF1P54274 439 aa8.23□□□□□ -1.09
NKRF-204ENST00000542113 XRN1Q8IZH2 1706 aaKnown RBP8.23□□□□□ -1.09
NKRF-204ENST00000542113 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
NKRF-204ENST00000542113 CEP170BQ9Y4F5 1589 aaPredicted RBP8.23□□□□□ -1.09
NKRF-204ENST00000542113 FOXO3O43524 673 aa8.23□□□□□ -1.09
NKRF-204ENST00000542113 RRP9O43818 475 aaKnown RBP8.23□□□□□ -1.09
NKRF-204ENST00000542113 LTKP29376 864 aa8.23□□□□□ -1.09
NKRF-204ENST00000542113 NLRP6P59044 892 aa8.23□□□□□ -1.09
NKRF-204ENST00000542113 ZGPATQ8N5A5 531 aaKnown RBP8.23□□□□□ -1.09
NKRF-204ENST00000542113 SSH3Q8TE77 659 aa8.23□□□□□ -1.09
NKRF-204ENST00000542113 RILPL2Q969X0 211 aa8.23□□□□□ -1.09
NKRF-204ENST00000542113 MIS18AQ9NYP9 233 aa8.23□□□□□ -1.09
NKRF-204ENST00000542113 NUTM2FA1L443 756 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 HDGFL1Q5TGJ6 251 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 KIF1BPQ96EK5 621 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 PIK3C2AO00443 1686 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 HOXC9P31274 260 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 CNTROBQ8N137 903 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 THEMISQ8N1K5 641 aaPredicted RBP8.22□□□□□ -1.09
NKRF-204ENST00000542113 PDLIM2Q96JY6 352 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 LRRFIP2Q9Y608 721 aaKnown RBP8.22□□□□□ -1.09
NKRF-204ENST00000542113 ADGRL3Q9HAR2 1447 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 CSPP1Q1MSJ5 1256 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 ATP6V1DQ9Y5K8 247 aa8.22□□□□□ -1.09
NKRF-204ENST00000542113 PDIA4P13667 645 aaKnown RBP8.21□□□□□ -1.09
NKRF-204ENST00000542113 FAM184AQ8NB25 1140 aa8.21□□□□□ -1.09
NKRF-204ENST00000542113 UBE2Q2Q8WVN8 375 aa8.21□□□□□ -1.09
NKRF-204ENST00000542113 RUFY2Q8WXA3 655 aa8.21□□□□□ -1.09
NKRF-204ENST00000542113 CCDC39Q9UFE4 941 aa8.21□□□□□ -1.09
NKRF-204ENST00000542113 ERBB4Q15303 1308 aa8.21□□□□□ -1.09
NKRF-204ENST00000542113 KIAA1211Q6ZU35 1233 aa8.21□□□□□ -1.1
NKRF-204ENST00000542113 GPATCH3Q96I76 525 aa8.21□□□□□ -1.1
NKRF-204ENST00000542113 SLC26A8Q96RN1 970 aa8.21□□□□□ -1.1
NKRF-204ENST00000542113 ZDHHC9Q9Y397 364 aa8.21□□□□□ -1.1
NKRF-204ENST00000542113 TUBGCP6Q96RT7 1819 aa8.21□□□□□ -1.1
NKRF-204ENST00000542113 PNMA6EA0A0J9YXQ4 647 aa8.21□□□□□ -1.1
NKRF-204ENST00000542113 LETM1O95202 739 aaPredicted RBP8.21□□□□□ -1.1
NKRF-204ENST00000542113 NOL7Q9UMY1 257 aaKnown RBP8.21□□□□□ -1.1
NKRF-204ENST00000542113 OFD1O75665 1012 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 HSPA4P34932 840 aa8.2□□□□□ -1.1
NKRF-204ENST00000542113 PKP1Q13835 747 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 172.8 ms