RNA–Protein interactions for RNA: ENST00000541948.2

NECAP1-205, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-205ENST00000541948 HMOX1P09601 288 aa10.48□□□□□ -0.73
NECAP1-205ENST00000541948 LINC00116Q8NCU8 138 aa10.48□□□□□ -0.73
NECAP1-205ENST00000541948 SLC16A10Q8TF71 515 aa10.48□□□□□ -0.73
NECAP1-205ENST00000541948 MTFR1LQ9H019 292 aa10.48□□□□□ -0.73
NECAP1-205ENST00000541948 PLEKHG2Q9H7P9 1386 aa10.48□□□□□ -0.73
NECAP1-205ENST00000541948 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
NECAP1-205ENST00000541948 TJP1Q07157 1748 aa10.47□□□□□ -0.73
NECAP1-205ENST00000541948 CHD4Q14839 1912 aa10.47□□□□□ -0.73
NECAP1-205ENST00000541948 ZNF530Q6P9A1 599 aaPredicted RBP10.46□□□□□ -0.73
NECAP1-205ENST00000541948 FHDC1Q9C0D6 1143 aaPredicted RBP10.46□□□□□ -0.73
NECAP1-205ENST00000541948 MYH14Q7Z406 1995 aaKnown RBP10.46□□□□□ -0.74
NECAP1-205ENST00000541948 CICQ96RK0 1608 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-205ENST00000541948 MAP3K5Q99683 1374 aa10.45□□□□□ -0.74
NECAP1-205ENST00000541948 LOC102724428A0A0B4J2F2 783 aa10.45□□□□□ -0.74
NECAP1-205ENST00000541948 SIK1P57059 783 aa10.45□□□□□ -0.74
NECAP1-205ENST00000541948 PLEKHO1Q53GL0 409 aaPredicted RBP10.45□□□□□ -0.74
NECAP1-205ENST00000541948 SYT17Q9BSW7 474 aa10.45□□□□□ -0.74
NECAP1-205ENST00000541948 LGR6Q9HBX8 967 aa10.45□□□□□ -0.74
NECAP1-205ENST00000541948 TMOD3Q9NYL9 352 aa10.45□□□□□ -0.74
NECAP1-205ENST00000541948 TFCP2L1Q9NZI6 479 aa10.45□□□□□ -0.74
NECAP1-205ENST00000541948 MRC1P22897 1456 aa10.44□□□□□ -0.74
NECAP1-205ENST00000541948 DIAPH1O60610 1272 aaKnown RBP10.44□□□□□ -0.74
NECAP1-205ENST00000541948 YY1P25490 414 aa10.44□□□□□ -0.74
NECAP1-205ENST00000541948 PPP2R1AP30153 589 aa10.44□□□□□ -0.74
NECAP1-205ENST00000541948 MTHFSDQ2M296 383 aaKnown RBP10.44□□□□□ -0.74
NECAP1-205ENST00000541948 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
NECAP1-205ENST00000541948 SIPA1L3O60292 1781 aaPredicted RBP10.44□□□□□ -0.74
NECAP1-205ENST00000541948 C4AP0C0L4 1744 aa10.44□□□□□ -0.74
NECAP1-205ENST00000541948 ERVV-2B6SEH9 535 aa10.43□□□□□ -0.74
NECAP1-205ENST00000541948 AMOTQ4VCS5 1084 aa10.43□□□□□ -0.74
NECAP1-205ENST00000541948 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
NECAP1-205ENST00000541948 NFATC2IPQ8NCF5 419 aa10.43□□□□□ -0.74
NECAP1-205ENST00000541948 KCPQ6ZWJ8 1503 aa10.43□□□□□ -0.74
NECAP1-205ENST00000541948 UBR2Q8IWV8 1755 aa10.42□□□□□ -0.74
NECAP1-205ENST00000541948 SMARCC1Q92922 1105 aaPredicted RBP10.42□□□□□ -0.74
NECAP1-205ENST00000541948 PHACTR3Q96KR7 559 aa10.42□□□□□ -0.74
NECAP1-205ENST00000541948 ARXQ96QS3 562 aa10.42□□□□□ -0.74
NECAP1-205ENST00000541948 KIAA1551Q9HCM1 1747 aa10.41□□□□□ -0.74
NECAP1-205ENST00000541948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
NECAP1-205ENST00000541948 POLD1P28340 1107 aa10.41□□□□□ -0.74
NECAP1-205ENST00000541948 ATP6V1AP38606 617 aa10.41□□□□□ -0.74
NECAP1-205ENST00000541948 NLGN2Q8NFZ4 835 aa10.41□□□□□ -0.74
NECAP1-205ENST00000541948 RNMTO43148 476 aaKnown RBP10.4□□□□□ -0.74
NECAP1-205ENST00000541948 PHF14O94880 888 aa10.4□□□□□ -0.74
NECAP1-205ENST00000541948 CABP4P57796 275 aa10.4□□□□□ -0.74
NECAP1-205ENST00000541948 AKAP4Q5JQC9 854 aa10.4□□□□□ -0.74
NECAP1-205ENST00000541948 FLAD1Q8NFF5 587 aa10.4□□□□□ -0.74
NECAP1-205ENST00000541948 RSPH6AQ9H0K4 717 aa10.4□□□□□ -0.74
NECAP1-205ENST00000541948 HSP90AB1P08238 724 aaKnown RBP10.39□□□□□ -0.75
NECAP1-205ENST00000541948 SLC39A6Q13433 755 aa10.39□□□□□ -0.75
NECAP1-205ENST00000541948 IL17REQ8NFR9 667 aa10.39□□□□□ -0.75
NECAP1-205ENST00000541948 SLC52A2Q9HAB3 445 aa10.39□□□□□ -0.75
NECAP1-205ENST00000541948 U2SURPO15042 1029 aaKnown RBP10.38□□□□□ -0.75
NECAP1-205ENST00000541948 GNPATO15228 680 aa10.38□□□□□ -0.75
NECAP1-205ENST00000541948 PTCD1O75127 700 aaKnown RBP10.38□□□□□ -0.75
NECAP1-205ENST00000541948 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
NECAP1-205ENST00000541948 AK7Q96M32 723 aa10.38□□□□□ -0.75
NECAP1-205ENST00000541948 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
NECAP1-205ENST00000541948 DLG5Q8TDM6 1919 aa10.37□□□□□ -0.75
NECAP1-205ENST00000541948 PRKAR2BP31323 418 aa10.37□□□□□ -0.75
NECAP1-205ENST00000541948 INTS5Q6P9B9 1019 aaKnown RBP10.37□□□□□ -0.75
NECAP1-205ENST00000541948 DNAJC10Q8IXB1 793 aa10.37□□□□□ -0.75
NECAP1-205ENST00000541948 CNTNAP4Q9C0A0 1308 aa10.36□□□□□ -0.75
NECAP1-205ENST00000541948 KIF13BQ9NQT8 1826 aa10.36□□□□□ -0.75
NECAP1-205ENST00000541948 SSFA2P28290 1259 aa10.36□□□□□ -0.75
NECAP1-205ENST00000541948 CEMIPQ8WUJ3 1361 aa10.36□□□□□ -0.75
NECAP1-205ENST00000541948 KCNQ3O43525 872 aa10.35□□□□□ -0.75
NECAP1-205ENST00000541948 YBX3P16989 372 aaKnown RBP eCLIP10.35□□□□□ -0.75
NECAP1-205ENST00000541948 KLHL34Q8N239 644 aa10.35□□□□□ -0.75
NECAP1-205ENST00000541948 ARHGEF1Q92888 912 aaKnown RBP10.35□□□□□ -0.75
NECAP1-205ENST00000541948 GRIN3BO60391 1043 aa10.34□□□□□ -0.75
NECAP1-205ENST00000541948 RPS6KA4O75676 772 aa10.34□□□□□ -0.75
NECAP1-205ENST00000541948 CRKLP46109 303 aaKnown RBP10.34□□□□□ -0.75
NECAP1-205ENST00000541948 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
NECAP1-205ENST00000541948 N4BP2Q86UW6 1770 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-205ENST00000541948 CYP19A1P11511 503 aaPredicted RBP10.33□□□□□ -0.76
NECAP1-205ENST00000541948 GYS1P13807 737 aa10.33□□□□□ -0.76
NECAP1-205ENST00000541948 DDX10Q13206 875 aaKnown RBP10.33□□□□□ -0.76
NECAP1-205ENST00000541948 DCTN1Q14203 1278 aa10.33□□□□□ -0.76
NECAP1-205ENST00000541948 SRP68Q9UHB9 627 aaKnown RBP10.33□□□□□ -0.76
NECAP1-205ENST00000541948 BRCA1P38398 1863 aaKnown RBP10.32□□□□□ -0.76
NECAP1-205ENST00000541948 GNAT3A8MTJ3 354 aa10.32□□□□□ -0.76
NECAP1-205ENST00000541948 U2AF1L5P0DN76 240 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-205ENST00000541948 U2AF1Q01081 240 aaKnown RBP eCLIP10.32□□□□□ -0.76
NECAP1-205ENST00000541948 ZNF496Q96IT1 587 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-205ENST00000541948 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
NECAP1-205ENST00000541948 ZBTB1Q9Y2K1 713 aa10.32□□□□□ -0.76
NECAP1-205ENST00000541948 RTCBQ9Y3I0 505 aaKnown RBP10.32□□□□□ -0.76
NECAP1-205ENST00000541948 UTRNP46939 3433 aa10.32□□□□□ -0.76
NECAP1-205ENST00000541948 SOS1Q07889 1333 aaPredicted RBP10.32□□□□□ -0.76
NECAP1-205ENST00000541948 PXDNLA1KZ92 1463 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 PRAMEF22A3QJZ6 481 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 MMP10P09238 476 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 DDR1Q08345 913 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 FKBP8Q14318 412 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 TRAPPC3LQ5T215 181 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 MCM10Q7L590 875 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 CFAP53Q96M91 514 aa10.31□□□□□ -0.76
NECAP1-205ENST00000541948 BCL2L12Q9HB09 334 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms