RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 TUBGCP6Q96RT7 1819 aa8.49□□□□□ -1.05
VEGFB-203ENST00000541681 PPM1GO15355 546 aaPredicted RBP8.48□□□□□ -1.05
VEGFB-203ENST00000541681 KCNQ4P56696 695 aa8.48□□□□□ -1.05
VEGFB-203ENST00000541681 ZNF827Q17R98 1081 aa8.48□□□□□ -1.05
VEGFB-203ENST00000541681 EXOC6Q8TAG9 804 aa8.48□□□□□ -1.05
VEGFB-203ENST00000541681 TSHZ2Q9NRE2 1034 aa8.48□□□□□ -1.05
VEGFB-203ENST00000541681 RRP7AQ9Y3A4 280 aaKnown RBP8.48□□□□□ -1.05
VEGFB-203ENST00000541681 KIF24Q5T7B8 1368 aa8.48□□□□□ -1.05
VEGFB-203ENST00000541681 MSH5O43196 834 aa8.47□□□□□ -1.05
VEGFB-203ENST00000541681 PRIM1P49642 420 aaKnown RBP8.47□□□□□ -1.05
VEGFB-203ENST00000541681 RIPK4P57078 832 aa8.47□□□□□ -1.05
VEGFB-203ENST00000541681 RAPGEF4Q8WZA2 1011 aa8.47□□□□□ -1.05
VEGFB-203ENST00000541681 MTFR1LQ9H019 292 aa8.47□□□□□ -1.05
VEGFB-203ENST00000541681 TRIM35Q9UPQ4 493 aa8.47□□□□□ -1.05
VEGFB-203ENST00000541681 FLT4P35916 1363 aa8.47□□□□□ -1.05
VEGFB-203ENST00000541681 LY75O60449 1722 aa8.46□□□□□ -1.05
VEGFB-203ENST00000541681 PLIN1O60240 522 aa8.46□□□□□ -1.06
VEGFB-203ENST00000541681 TATP17735 454 aaPredicted RBP8.46□□□□□ -1.06
VEGFB-203ENST00000541681 PTGER2P43116 358 aa8.46□□□□□ -1.06
VEGFB-203ENST00000541681 PDE3AQ14432 1141 aa8.46□□□□□ -1.06
VEGFB-203ENST00000541681 NFE2L2Q16236 605 aa8.46□□□□□ -1.06
VEGFB-203ENST00000541681 NBPF6Q5VWK0 638 aa8.46□□□□□ -1.06
VEGFB-203ENST00000541681 ZCRB1Q8TBF4 217 aaKnown RBP8.46□□□□□ -1.06
VEGFB-203ENST00000541681 NBPF4Q96M43 638 aa8.46□□□□□ -1.06
VEGFB-203ENST00000541681 FHDC1Q9C0D6 1143 aaPredicted RBP8.46□□□□□ -1.06
VEGFB-203ENST00000541681 LRRC4BQ9NT99 713 aa8.46□□□□□ -1.06
VEGFB-203ENST00000541681 TFCP2L1Q9NZI6 479 aa8.46□□□□□ -1.06
VEGFB-203ENST00000541681 PRKAR2BP31323 418 aa8.45□□□□□ -1.06
VEGFB-203ENST00000541681 CALD1Q05682 793 aaKnown RBP8.45□□□□□ -1.06
VEGFB-203ENST00000541681 HSP90AB2PQ58FF8 381 aa8.45□□□□□ -1.06
VEGFB-203ENST00000541681 CRBNQ96SW2 442 aa8.45□□□□□ -1.06
VEGFB-203ENST00000541681 CCNL1Q9UK58 526 aaPredicted RBP8.45□□□□□ -1.06
VEGFB-203ENST00000541681 C5P01031 1676 aa8.45□□□□□ -1.06
VEGFB-203ENST00000541681 PCDH11XQ9BZA7 1347 aa8.45□□□□□ -1.06
VEGFB-203ENST00000541681 PCDH11YQ9BZA8 1340 aa8.45□□□□□ -1.06
VEGFB-203ENST00000541681 QSER1Q2KHR3 1735 aa8.45□□□□□ -1.06
VEGFB-203ENST00000541681 TOGARAM1Q9Y4F4 1720 aa8.45□□□□□ -1.06
VEGFB-203ENST00000541681 RARSP54136 660 aaKnown RBP8.44□□□□□ -1.06
VEGFB-203ENST00000541681 LMOD3Q0VAK6 560 aa8.44□□□□□ -1.06
VEGFB-203ENST00000541681 AAMPQ13685 434 aa8.44□□□□□ -1.06
VEGFB-203ENST00000541681 SLC27A3Q5K4L6 730 aa8.44□□□□□ -1.06
VEGFB-203ENST00000541681 ARXQ96QS3 562 aa8.44□□□□□ -1.06
VEGFB-203ENST00000541681 PKD1L3Q7Z443 1732 aa8.43□□□□□ -1.06
VEGFB-203ENST00000541681 BCAR3O75815 825 aa8.43□□□□□ -1.06
VEGFB-203ENST00000541681 HMOX1P09601 288 aa8.43□□□□□ -1.06
VEGFB-203ENST00000541681 POLD1P28340 1107 aa8.43□□□□□ -1.06
VEGFB-203ENST00000541681 EIF4A2Q14240 407 aaKnown RBP8.43□□□□□ -1.06
VEGFB-203ENST00000541681 ZNF428Q96B54 188 aa8.43□□□□□ -1.06
VEGFB-203ENST00000541681 PNPLA7Q6ZV29 1317 aa8.43□□□□□ -1.06
VEGFB-203ENST00000541681 ITGB4P16144 1822 aa8.43□□□□□ -1.06
VEGFB-203ENST00000541681 MS4A1P11836 297 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 GNAI1P63096 354 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 MSL1Q68DK7 614 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 MPRIPQ6WCQ1 1025 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 AKT1S1Q96B36 256 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 PHACTR3Q96KR7 559 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 SYT17Q9BSW7 474 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 FANCIQ9NVI1 1328 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 PALLDQ8WX93 1383 aa8.42□□□□□ -1.06
VEGFB-203ENST00000541681 KDRP35968 1356 aa8.41□□□□□ -1.06
VEGFB-203ENST00000541681 EXOSC9Q06265 439 aaKnown RBP8.41□□□□□ -1.06
VEGFB-203ENST00000541681 C20orf194Q5TEA3 1177 aa8.41□□□□□ -1.06
VEGFB-203ENST00000541681 TAF1LQ8IZX4 1826 aa8.4□□□□□ -1.06
VEGFB-203ENST00000541681 ZNF853P0CG23 659 aa8.4□□□□□ -1.06
VEGFB-203ENST00000541681 ADRA2BP18089 450 aa8.4□□□□□ -1.06
VEGFB-203ENST00000541681 BRPF1P55201 1214 aaPredicted RBP8.4□□□□□ -1.06
VEGFB-203ENST00000541681 GPR162Q16538 588 aa8.4□□□□□ -1.06
VEGFB-203ENST00000541681 ALDH1L2Q3SY69 923 aa8.4□□□□□ -1.06
VEGFB-203ENST00000541681 SULT6B1Q6IMI4 303 aa8.4□□□□□ -1.06
VEGFB-203ENST00000541681 SGIP1Q9BQI5 828 aa8.4□□□□□ -1.06
VEGFB-203ENST00000541681 IFT57Q9NWB7 429 aa8.4□□□□□ -1.06
VEGFB-203ENST00000541681 C4BP0C0L5 1744 aa8.4□□□□□ -1.07
VEGFB-203ENST00000541681 CHD4Q14839 1912 aa8.39□□□□□ -1.07
VEGFB-203ENST00000541681 IGSF1Q8N6C5 1336 aa8.39□□□□□ -1.07
VEGFB-203ENST00000541681 CYP27B1O15528 508 aa8.39□□□□□ -1.07
VEGFB-203ENST00000541681 PHF14O94880 888 aa8.39□□□□□ -1.07
VEGFB-203ENST00000541681 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
VEGFB-203ENST00000541681 TSR2Q969E8 191 aaKnown RBP8.39□□□□□ -1.07
VEGFB-203ENST00000541681 AK7Q96M32 723 aa8.39□□□□□ -1.07
VEGFB-203ENST00000541681 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
VEGFB-203ENST00000541681 SPG7Q9UQ90 795 aa8.39□□□□□ -1.07
VEGFB-203ENST00000541681 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
VEGFB-203ENST00000541681 COL24A1Q17RW2 1714 aa8.38□□□□□ -1.07
VEGFB-203ENST00000541681 KDM2BQ8NHM5 1336 aa8.38□□□□□ -1.07
VEGFB-203ENST00000541681 TCERG1O14776 1098 aaKnown RBP8.38□□□□□ -1.07
VEGFB-203ENST00000541681 HTATSF1O43719 755 aaKnown RBP8.38□□□□□ -1.07
VEGFB-203ENST00000541681 ZKSCAN2Q63HK3 967 aa8.38□□□□□ -1.07
VEGFB-203ENST00000541681 CENPQQ7L2Z9 268 aaPredicted RBP8.38□□□□□ -1.07
VEGFB-203ENST00000541681 NLGN2Q8NFZ4 835 aa8.38□□□□□ -1.07
VEGFB-203ENST00000541681 NCAPD2Q15021 1401 aa8.37□□□□□ -1.07
VEGFB-203ENST00000541681 MAP3K5Q99683 1374 aa8.37□□□□□ -1.07
VEGFB-203ENST00000541681 IPO8O15397 1037 aaKnown RBP8.37□□□□□ -1.07
VEGFB-203ENST00000541681 SMIM5Q71RC9 77 aa8.37□□□□□ -1.07
VEGFB-203ENST00000541681 COL23A1Q86Y22 540 aaPredicted RBP8.37□□□□□ -1.07
VEGFB-203ENST00000541681 AEBP1Q8IUX7 1158 aa8.37□□□□□ -1.07
VEGFB-203ENST00000541681 SLC16A10Q8TF71 515 aa8.37□□□□□ -1.07
VEGFB-203ENST00000541681 FRAT1Q92837 279 aaPredicted RBP8.37□□□□□ -1.07
VEGFB-203ENST00000541681 EYA1Q99502 592 aa8.37□□□□□ -1.07
VEGFB-203ENST00000541681 TMOD3Q9NYL9 352 aa8.37□□□□□ -1.07
VEGFB-203ENST00000541681 UBR3Q6ZT12 1888 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms