RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 MTFR1Q15390 333 aa7.25□□□□□ -1.25
CUL3-214ENST00000541548 EML3Q32P44 896 aa7.25□□□□□ -1.25
CUL3-214ENST00000541548 SLC4A9Q96Q91 983 aa7.25□□□□□ -1.25
CUL3-214ENST00000541548 LOC100996750A0A140TA64 210 aa7.24□□□□□ -1.25
CUL3-214ENST00000541548 WDR44Q5JSH3 913 aa7.24□□□□□ -1.25
CUL3-214ENST00000541548 CFAP70Q5T0N1 1121 aa7.24□□□□□ -1.25
CUL3-214ENST00000541548 IRF7Q92985 503 aa7.24□□□□□ -1.25
CUL3-214ENST00000541548 SIRT1Q96EB6 747 aa7.24□□□□□ -1.25
CUL3-214ENST00000541548 NLRP3Q96P20 1036 aa7.24□□□□□ -1.25
CUL3-214ENST00000541548 KRTAP4-6Q9BYQ5 205 aa7.24□□□□□ -1.25
CUL3-214ENST00000541548 PPP1R12CQ9BZL4 782 aa7.24□□□□□ -1.25
CUL3-214ENST00000541548 TFIP11Q9UBB9 837 aaKnown RBP7.24□□□□□ -1.25
CUL3-214ENST00000541548 FOXK2Q01167 660 aa7.23□□□□□ -1.25
CUL3-214ENST00000541548 UBAP2LQ14157 1087 aaKnown RBP7.23□□□□□ -1.25
CUL3-214ENST00000541548 C4orf17Q53FE4 359 aa7.23□□□□□ -1.25
CUL3-214ENST00000541548 ESCO1Q5FWF5 840 aa7.23□□□□□ -1.25
CUL3-214ENST00000541548 RNFT1Q5M7Z0 435 aa7.23□□□□□ -1.25
CUL3-214ENST00000541548 KANK4Q5T7N3 995 aaPredicted RBP7.23□□□□□ -1.25
CUL3-214ENST00000541548 PPARGC1BQ86YN6 1023 aaKnown RBP7.23□□□□□ -1.25
CUL3-214ENST00000541548 ZNF358Q9NW07 568 aa7.23□□□□□ -1.25
CUL3-214ENST00000541548 ZNF777Q9ULD5 760 aaPredicted RBP7.23□□□□□ -1.25
CUL3-214ENST00000541548 NOD1Q9Y239 953 aa7.23□□□□□ -1.25
CUL3-214ENST00000541548 TLR1Q15399 786 aa7.22□□□□□ -1.25
CUL3-214ENST00000541548 SLC27A3Q5K4L6 730 aa7.22□□□□□ -1.25
CUL3-214ENST00000541548 SLC16A10Q8TF71 515 aa7.22□□□□□ -1.25
CUL3-214ENST00000541548 ZNF837Q96EG3 531 aaPredicted RBP7.22□□□□□ -1.25
CUL3-214ENST00000541548 DYRK1BQ9Y463 629 aa7.22□□□□□ -1.25
CUL3-214ENST00000541548 SMTNP53814 917 aa7.21□□□□□ -1.26
CUL3-214ENST00000541548 GAS6Q14393 721 aa7.21□□□□□ -1.26
CUL3-214ENST00000541548 TAS1R3Q7RTX0 852 aa7.21□□□□□ -1.26
CUL3-214ENST00000541548 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.21□□□□□ -1.26
CUL3-214ENST00000541548 CALR3Q96L12 384 aaKnown RBP7.21□□□□□ -1.26
CUL3-214ENST00000541548 ZSCAN10Q96SZ4 725 aaPredicted RBP7.21□□□□□ -1.26
CUL3-214ENST00000541548 ZMYND15Q9H091 742 aa7.21□□□□□ -1.26
CUL3-214ENST00000541548 ATP4AP20648 1035 aa7.2□□□□□ -1.26
CUL3-214ENST00000541548 SRPK2P78362 688 aaKnown RBP7.2□□□□□ -1.26
CUL3-214ENST00000541548 DBN1Q16643 649 aa7.2□□□□□ -1.26
CUL3-214ENST00000541548 CRTC2Q53ET0 693 aaPredicted RBP7.2□□□□□ -1.26
CUL3-214ENST00000541548 SIX5Q8N196 739 aa7.2□□□□□ -1.26
CUL3-214ENST00000541548 RHBDD1Q8TEB9 315 aa7.2□□□□□ -1.26
CUL3-214ENST00000541548 ZDHHC1Q8WTX9 485 aa7.2□□□□□ -1.26
CUL3-214ENST00000541548 MKRN1Q9UHC7 482 aaKnown RBP7.2□□□□□ -1.26
CUL3-214ENST00000541548 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
CUL3-214ENST00000541548 HCN2Q9UL51 889 aa7.2□□□□□ -1.26
CUL3-214ENST00000541548 A6NJY4 79 aa7.19□□□□□ -1.26
CUL3-214ENST00000541548 POTEAQ6S8J7 498 aa7.19□□□□□ -1.26
CUL3-214ENST00000541548 VWA5B2Q8N398 1253 aa7.19□□□□□ -1.26
CUL3-214ENST00000541548 OGFOD1Q8N543 542 aa7.19□□□□□ -1.26
CUL3-214ENST00000541548 TPCN2Q8NHX9 752 aa7.19□□□□□ -1.26
CUL3-214ENST00000541548 ESF1Q9H501 851 aaKnown RBP7.19□□□□□ -1.26
CUL3-214ENST00000541548 SCHIP1Q9P0W5 487 aaPredicted RBP7.19□□□□□ -1.26
CUL3-214ENST00000541548 PHKA2P46019 1235 aa7.18□□□□□ -1.26
CUL3-214ENST00000541548 TRIM22Q8IYM9 498 aa7.18□□□□□ -1.26
CUL3-214ENST00000541548 KLRG1Q96E93 195 aa7.18□□□□□ -1.26
CUL3-214ENST00000541548 ARXQ96QS3 562 aa7.18□□□□□ -1.26
CUL3-214ENST00000541548 C1orf115Q9H7X2 142 aa7.18□□□□□ -1.26
CUL3-214ENST00000541548 TIMMDC1Q9NPL8 285 aa7.18□□□□□ -1.26
CUL3-214ENST00000541548 CDK2AP1O14519 115 aa7.17□□□□□ -1.26
CUL3-214ENST00000541548 PTK7Q13308 1070 aa7.17□□□□□ -1.26
CUL3-214ENST00000541548 TRIM50Q86XT4 487 aa7.17□□□□□ -1.26
CUL3-214ENST00000541548 LARGE2Q8N3Y3 721 aa7.17□□□□□ -1.26
CUL3-214ENST00000541548 DNAAF2Q9NVR5 837 aaKnown RBP7.17□□□□□ -1.26
CUL3-214ENST00000541548 C21orf2O43822 256 aa7.16□□□□□ -1.26
CUL3-214ENST00000541548 MSX1P28360 303 aa7.16□□□□□ -1.26
CUL3-214ENST00000541548 CCDC102BQ68D86 513 aa7.16□□□□□ -1.26
CUL3-214ENST00000541548 TNS4Q8IZW8 715 aa7.16□□□□□ -1.26
CUL3-214ENST00000541548 C7orf43Q8WVR3 580 aa7.16□□□□□ -1.26
CUL3-214ENST00000541548 ZNF594Q96JF6 807 aaPredicted RBP7.16□□□□□ -1.26
CUL3-214ENST00000541548 COL25A1Q9BXS0 654 aaPredicted RBP7.16□□□□□ -1.26
CUL3-214ENST00000541548 A0A1B0GTH6 734 aa7.15□□□□□ -1.26
CUL3-214ENST00000541548 CDC14CA4D256 554 aa7.15□□□□□ -1.26
CUL3-214ENST00000541548 SFI1A8K8P3 1242 aa7.15□□□□□ -1.26
CUL3-214ENST00000541548 M0R2N6 131 aa7.15□□□□□ -1.26
CUL3-214ENST00000541548 F11P03951 625 aa7.15□□□□□ -1.26
CUL3-214ENST00000541548 PLA2G4AP47712 749 aa7.15□□□□□ -1.26
CUL3-214ENST00000541548 SH3PXD2AQ5TCZ1 1133 aa7.15□□□□□ -1.26
CUL3-214ENST00000541548 TMEM214Q6NUQ4 689 aaKnown RBP7.15□□□□□ -1.26
CUL3-214ENST00000541548 NDFIP2Q9NV92 336 aa7.15□□□□□ -1.26
CUL3-214ENST00000541548 FAM196BA6NMK8 535 aa7.14□□□□□ -1.27
CUL3-214ENST00000541548 LMOD1P29536 600 aaPredicted RBP7.14□□□□□ -1.27
CUL3-214ENST00000541548 ATP1A2P50993 1020 aa7.14□□□□□ -1.27
CUL3-214ENST00000541548 GNASQ5JWF2 1037 aa7.14□□□□□ -1.27
CUL3-214ENST00000541548 SV2AQ7L0J3 742 aa7.14□□□□□ -1.27
CUL3-214ENST00000541548 TSEN2Q8NCE0 465 aaKnown RBP7.14□□□□□ -1.27
CUL3-214ENST00000541548 GAS2L1Q99501 681 aaPredicted RBP7.14□□□□□ -1.27
CUL3-214ENST00000541548 CRISPLD1Q9H336 500 aa7.14□□□□□ -1.27
CUL3-214ENST00000541548 USP17L15C9J2P7 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L10C9JJH3 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L13C9JLJ4 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L12C9JPN9 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L11C9JVI0 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L21D6R901 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L18D6R9N7 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L22D6RA61 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L17D6RBQ6 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L19D6RCP7 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 USP17L20D6RJB6 530 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 GPR25O00155 361 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 EML1O00423 815 aa7.13□□□□□ -1.27
CUL3-214ENST00000541548 SLURP2P0DP57 97 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms