RNA–Protein interactions for RNA: ENST00000541242.1

AC005840.4-201, humanhuman

BASIC

Gene AC005840.4, Length 2,494 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.4-201ENST00000541242 TPRNQ4KMQ1 711 aa18.11■□□□□ 0.49
AC005840.4-201ENST00000541242 INTS3Q68E01 1043 aaKnown RBP18.11■□□□□ 0.49
AC005840.4-201ENST00000541242 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
AC005840.4-201ENST00000541242 FER1L4A9Z1Z3 1794 aa18.11■□□□□ 0.49
AC005840.4-201ENST00000541242 ACEP12821 1306 aa18.11■□□□□ 0.49
AC005840.4-201ENST00000541242 NOL8Q76FK4 1167 aaKnown RBP18.11■□□□□ 0.49
AC005840.4-201ENST00000541242 ABCC4O15439 1325 aa18.1■□□□□ 0.49
AC005840.4-201ENST00000541242 GDPD2Q9HCC8 539 aa18.1■□□□□ 0.49
AC005840.4-201ENST00000541242 PIK3R4Q99570 1358 aa18.1■□□□□ 0.49
AC005840.4-201ENST00000541242 TSPY26PQ9H489 355 aa18.1■□□□□ 0.49
AC005840.4-201ENST00000541242 TTC21BQ7Z4L5 1316 aa18.09■□□□□ 0.49
AC005840.4-201ENST00000541242 BRPF1P55201 1214 aaPredicted RBP18.09■□□□□ 0.49
AC005840.4-201ENST00000541242 EID1Q9Y6B2 187 aa18.09■□□□□ 0.49
AC005840.4-201ENST00000541242 DCTPP1Q9H773 170 aa18.08■□□□□ 0.49
AC005840.4-201ENST00000541242 TTC12Q9H892 705 aaPredicted RBP18.08■□□□□ 0.49
AC005840.4-201ENST00000541242 AMOTL2Q9Y2J4 779 aa18.08■□□□□ 0.49
AC005840.4-201ENST00000541242 ARHGAP45Q92619 1136 aa18.08■□□□□ 0.48
AC005840.4-201ENST00000541242 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
AC005840.4-201ENST00000541242 PLEKHG3A1L390 1219 aa18.07■□□□□ 0.48
AC005840.4-201ENST00000541242 GADD45BO75293 160 aaPredicted RBP18.07■□□□□ 0.48
AC005840.4-201ENST00000541242 TOPAZ1Q8N9V7 1692 aa18.07■□□□□ 0.48
AC005840.4-201ENST00000541242 NEK4P51957 841 aa18.07■□□□□ 0.48
AC005840.4-201ENST00000541242 ATP2B3Q16720 1220 aa18.07■□□□□ 0.48
AC005840.4-201ENST00000541242 TMX3Q96JJ7 454 aa18.07■□□□□ 0.48
AC005840.4-201ENST00000541242 ARHGAP23Q9P227 1491 aa18.06■□□□□ 0.48
AC005840.4-201ENST00000541242 MBD3O95983 291 aa18.06■□□□□ 0.48
AC005840.4-201ENST00000541242 MBIPQ9NS73 344 aa18.06■□□□□ 0.48
AC005840.4-201ENST00000541242 USP25Q9UHP3 1055 aa18.06■□□□□ 0.48
AC005840.4-201ENST00000541242 NRKQ7Z2Y5 1582 aa18.06■□□□□ 0.48
AC005840.4-201ENST00000541242 NOLC1Q14978 699 aaKnown RBP eCLIP18.06■□□□□ 0.48
AC005840.4-201ENST00000541242 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
AC005840.4-201ENST00000541242 SLIT1O75093 1534 aa18.06■□□□□ 0.48
AC005840.4-201ENST00000541242 TWISTNBQ3B726 338 aaPredicted RBP18.05■□□□□ 0.48
AC005840.4-201ENST00000541242 PPP4R3BQ5MIZ7 849 aa18.05■□□□□ 0.48
AC005840.4-201ENST00000541242 DLG5Q8TDM6 1919 aa18.05■□□□□ 0.48
AC005840.4-201ENST00000541242 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
AC005840.4-201ENST00000541242 USP6P35125 1406 aa18.05■□□□□ 0.48
AC005840.4-201ENST00000541242 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
AC005840.4-201ENST00000541242 UTP14CQ5TAP6 766 aaKnown RBP18.04■□□□□ 0.48
AC005840.4-201ENST00000541242 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
AC005840.4-201ENST00000541242 SPDYE4A6NLX3 237 aa18.04■□□□□ 0.48
AC005840.4-201ENST00000541242 BRD1O95696 1058 aa18.04■□□□□ 0.48
AC005840.4-201ENST00000541242 EIF4A2Q14240 407 aaKnown RBP18.04■□□□□ 0.48
AC005840.4-201ENST00000541242 PIBF1Q8WXW3 757 aa18.04■□□□□ 0.48
AC005840.4-201ENST00000541242 ZNF428Q96B54 188 aa18.04■□□□□ 0.48
AC005840.4-201ENST00000541242 OVOS2A0A0J9YW53 1432 aa18.03■□□□□ 0.48
AC005840.4-201ENST00000541242 OVOS2Q6IE36 1432 aa18.03■□□□□ 0.48
AC005840.4-201ENST00000541242 FGD1P98174 961 aa18.03■□□□□ 0.48
AC005840.4-201ENST00000541242 CASC1Q6TDU7 716 aa18.03■□□□□ 0.48
AC005840.4-201ENST00000541242 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
AC005840.4-201ENST00000541242 ZNF853P0CG23 659 aa18.03■□□□□ 0.48
AC005840.4-201ENST00000541242 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
AC005840.4-201ENST00000541242 SOX12O15370 315 aa18.02■□□□□ 0.48
AC005840.4-201ENST00000541242 REC8O95072 547 aa18.01■□□□□ 0.47
AC005840.4-201ENST00000541242 KRT24Q2M2I5 525 aa18.01■□□□□ 0.47
AC005840.4-201ENST00000541242 IFT57Q9NWB7 429 aa18.01■□□□□ 0.47
AC005840.4-201ENST00000541242 ERC2O15083 957 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 IGSF3O75054 1194 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 ADCY5O95622 1261 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 HSP90AB2PQ58FF8 381 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 TSHZ3Q63HK5 1081 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 THEMISQ8N1K5 641 aaPredicted RBP18■□□□□ 0.47
AC005840.4-201ENST00000541242 PRIMPOLQ96LW4 560 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 SSH2Q76I76 1423 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 GNAI1P63096 354 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 SULT6B1Q6IMI4 303 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 CFAP44Q96MT7 982 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 BCL2L12Q9HB09 334 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 PALD1Q9ULE6 856 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 PEAK1Q9H792 1746 aa18■□□□□ 0.47
AC005840.4-201ENST00000541242 RGPD8O14715 1765 aaPredicted RBP18■□□□□ 0.47
AC005840.4-201ENST00000541242 USP48Q86UV5 1035 aa17.99■□□□□ 0.47
AC005840.4-201ENST00000541242 API5Q9BZZ5 524 aaKnown RBP17.99■□□□□ 0.47
AC005840.4-201ENST00000541242 ATP10DQ9P241 1426 aa17.99■□□□□ 0.47
AC005840.4-201ENST00000541242 HMGN5P82970 282 aaKnown RBP17.99■□□□□ 0.47
AC005840.4-201ENST00000541242 PLCB2Q00722 1185 aa17.99■□□□□ 0.47
AC005840.4-201ENST00000541242 ANKRD44Q8N8A2 993 aa17.99■□□□□ 0.47
AC005840.4-201ENST00000541242 KIF3AQ9Y496 699 aa17.99■□□□□ 0.47
AC005840.4-201ENST00000541242 HCLS1P14317 486 aaPredicted RBP17.98■□□□□ 0.47
AC005840.4-201ENST00000541242 GTF2F1P35269 517 aaKnown RBP eCLIP17.98■□□□□ 0.47
AC005840.4-201ENST00000541242 CEP85Q6P2H3 762 aa17.98■□□□□ 0.47
AC005840.4-201ENST00000541242 SYAP1Q96A49 352 aaPredicted RBP17.97■□□□□ 0.47
AC005840.4-201ENST00000541242 NALCNQ8IZF0 1738 aa17.97■□□□□ 0.47
AC005840.4-201ENST00000541242 ADAMTSL3P82987 1691 aa17.97■□□□□ 0.47
AC005840.4-201ENST00000541242 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
AC005840.4-201ENST00000541242 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
AC005840.4-201ENST00000541242 FKBP5Q13451 457 aaPredicted RBP17.96■□□□□ 0.47
AC005840.4-201ENST00000541242 KCNA6P17658 529 aa17.95■□□□□ 0.46
AC005840.4-201ENST00000541242 LMOD3Q0VAK6 560 aa17.95■□□□□ 0.46
AC005840.4-201ENST00000541242 MEIS3Q99687 375 aa17.95■□□□□ 0.46
AC005840.4-201ENST00000541242 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
AC005840.4-201ENST00000541242 U2AF2P26368 475 aaKnown RBP eCLIP17.95■□□□□ 0.46
AC005840.4-201ENST00000541242 NGDNQ8NEJ9 315 aaKnown RBP17.95■□□□□ 0.46
AC005840.4-201ENST00000541242 MSH6P52701 1360 aa17.95■□□□□ 0.46
AC005840.4-201ENST00000541242 MAP3K19Q56UN5 1328 aa17.94■□□□□ 0.46
AC005840.4-201ENST00000541242 CUL4AQ13619 759 aa17.94■□□□□ 0.46
AC005840.4-201ENST00000541242 PDCL2Q8N4E4 241 aa17.94■□□□□ 0.46
AC005840.4-201ENST00000541242 RIOK3O14730 519 aaKnown RBP17.93■□□□□ 0.46
AC005840.4-201ENST00000541242 DTNBO60941 627 aa17.93■□□□□ 0.46
AC005840.4-201ENST00000541242 PHF14O94880 888 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms