RNA–Protein interactions for RNA: ENST00000541017.5

PPFIA2-204, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 4,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-204ENST00000541017 SPATA31A7Q8IWB4 1347 aa10.68□□□□□ -0.7
PPFIA2-204ENST00000541017 GJD4Q96KN9 370 aaPredicted RBP10.68□□□□□ -0.7
PPFIA2-204ENST00000541017 SPATA31A1Q5TZJ5 1347 aa10.68□□□□□ -0.7
PPFIA2-204ENST00000541017 CHL1O00533 1208 aa10.68□□□□□ -0.7
PPFIA2-204ENST00000541017 FNBP4Q8N3X1 1017 aaPredicted RBP10.68□□□□□ -0.7
PPFIA2-204ENST00000541017 USP54Q70EL1 1684 aa10.68□□□□□ -0.7
PPFIA2-204ENST00000541017 MAP2P11137 1827 aaKnown RBP10.68□□□□□ -0.7
PPFIA2-204ENST00000541017 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
PPFIA2-204ENST00000541017 RIC3Q7Z5B4 369 aa10.67□□□□□ -0.7
PPFIA2-204ENST00000541017 ITPRIPQ8IWB1 547 aa10.67□□□□□ -0.7
PPFIA2-204ENST00000541017 HSP90AB4PQ58FF6 505 aa10.67□□□□□ -0.7
PPFIA2-204ENST00000541017 COL3A1P02461 1466 aaPredicted RBP10.67□□□□□ -0.7
PPFIA2-204ENST00000541017 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
PPFIA2-204ENST00000541017 PHACTR3Q96KR7 559 aa10.67□□□□□ -0.7
PPFIA2-204ENST00000541017 VSIG10Q8N0Z9 540 aa10.66□□□□□ -0.7
PPFIA2-204ENST00000541017 RGPD8O14715 1765 aaPredicted RBP10.66□□□□□ -0.7
PPFIA2-204ENST00000541017 MBIPQ9NS73 344 aa10.66□□□□□ -0.7
PPFIA2-204ENST00000541017 GTF2E1P29083 439 aaPredicted RBP10.66□□□□□ -0.7
PPFIA2-204ENST00000541017 FLAD1Q8NFF5 587 aa10.66□□□□□ -0.7
PPFIA2-204ENST00000541017 ZNF330Q9Y3S2 320 aaPredicted RBP10.65□□□□□ -0.7
PPFIA2-204ENST00000541017 ALS2Q96Q42 1657 aa10.65□□□□□ -0.7
PPFIA2-204ENST00000541017 KRT27Q7Z3Y8 459 aa10.65□□□□□ -0.7
PPFIA2-204ENST00000541017 ZNF790Q6PG37 636 aa10.65□□□□□ -0.71
PPFIA2-204ENST00000541017 STRCP1A6NGW2 1772 aa10.65□□□□□ -0.71
PPFIA2-204ENST00000541017 TRPM3Q9HCF6 1732 aaPredicted RBP10.65□□□□□ -0.71
PPFIA2-204ENST00000541017 ELL2O00472 640 aaPredicted RBP10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 ATF7IPQ6VMQ6 1270 aa10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 C9orf78Q9NZ63 289 aaPredicted RBP10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 AXIN2Q9Y2T1 843 aa10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 GTF3C3Q9Y5Q9 886 aa10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 TRIM35Q9UPQ4 493 aa10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 BAG6P46379 1132 aa10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 NKX1-1Q15270 411 aaPredicted RBP10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 TSR2Q969E8 191 aaKnown RBP10.64□□□□□ -0.71
PPFIA2-204ENST00000541017 SLC4A10Q6U841 1118 aa10.63□□□□□ -0.71
PPFIA2-204ENST00000541017 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
PPFIA2-204ENST00000541017 NBPF14Q5TI25 921 aa10.63□□□□□ -0.71
PPFIA2-204ENST00000541017 SRCIN1Q9C0H9 1055 aa10.63□□□□□ -0.71
PPFIA2-204ENST00000541017 AK7Q96M32 723 aa10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 TNS2Q63HR2 1409 aa10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 RARSP54136 660 aaKnown RBP10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 DCTN1Q14203 1278 aa10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 SEPT12Q8IYM1 358 aa10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 NFATC2IPQ8NCF5 419 aa10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 GPATCH3Q96I76 525 aa10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 DDX21Q9NR30 783 aaKnown RBP eCLIP10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 PHRF1Q9P1Y6 1649 aaKnown RBP10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 TAF7LQ5H9L4 462 aa10.62□□□□□ -0.71
PPFIA2-204ENST00000541017 COL22A1Q8NFW1 1626 aaPredicted RBP10.61□□□□□ -0.71
PPFIA2-204ENST00000541017 ALDH1L1O75891 902 aa10.61□□□□□ -0.71
PPFIA2-204ENST00000541017 ZPR1O75312 459 aa10.61□□□□□ -0.71
PPFIA2-204ENST00000541017 CASC1Q6TDU7 716 aa10.61□□□□□ -0.71
PPFIA2-204ENST00000541017 THUMPD2Q9BTF0 503 aaKnown RBP10.61□□□□□ -0.71
PPFIA2-204ENST00000541017 UPF2Q9HAU5 1272 aaKnown RBP10.61□□□□□ -0.71
PPFIA2-204ENST00000541017 ZNF521Q96K83 1311 aa10.61□□□□□ -0.71
PPFIA2-204ENST00000541017 UBTFL1P0CB47 393 aaPredicted RBP10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 SHPRHQ149N8 1683 aa10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 PTCD1O75127 700 aaKnown RBP10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 COL16A1Q07092 1604 aaPredicted RBP10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 SENP3-EIF4A1A0A087X0R7 540 aa10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 ZNF853P0CG23 659 aa10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 CCDC125Q86Z20 511 aa10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 IL17REQ8NFR9 667 aa10.6□□□□□ -0.71
PPFIA2-204ENST00000541017 ATP6V1AP38606 617 aa10.59□□□□□ -0.71
PPFIA2-204ENST00000541017 LTN1O94822 1766 aa10.59□□□□□ -0.71
PPFIA2-204ENST00000541017 EIF4A1P60842 406 aaKnown RBP10.59□□□□□ -0.71
PPFIA2-204ENST00000541017 PRIM1P49642 420 aaKnown RBP10.58□□□□□ -0.71
PPFIA2-204ENST00000541017 SLC27A3Q5K4L6 730 aa10.58□□□□□ -0.71
PPFIA2-204ENST00000541017 ERC1Q8IUD2 1116 aa10.58□□□□□ -0.71
PPFIA2-204ENST00000541017 DNAAF4Q8WXU2 420 aa10.58□□□□□ -0.71
PPFIA2-204ENST00000541017 PARP4Q9UKK3 1724 aaKnown RBP10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 MSH5O43196 834 aa10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 FLIIQ13045 1269 aa10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 SLIT2O94813 1529 aa10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 VAMP4O75379 141 aa10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 GNAI2P04899 355 aa10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 CENPQQ7L2Z9 268 aaPredicted RBP10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 PPP1R42Q7Z4L9 355 aa10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 TRMT2AQ8IZ69 625 aaKnown RBP10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 RPAP2Q8IXW5 612 aaPredicted RBP10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 SSH1Q8WYL5 1049 aa10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 NOB1Q9ULX3 412 aaKnown RBP10.58□□□□□ -0.72
PPFIA2-204ENST00000541017 CAMTA1Q9Y6Y1 1673 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 CEMIPQ8WUJ3 1361 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 CYP27B1O15528 508 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 MVPQ14764 893 aaKnown RBP10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 LRRFIP1Q32MZ4 808 aaKnown RBP10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 NYXQ9GZU5 481 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 STK32BQ9NY57 414 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 CCNL1Q9UK58 526 aaPredicted RBP10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 PARP10Q53GL7 1025 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 HEG1Q9ULI3 1381 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 KSR2Q6VAB6 950 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 BCL11BQ9C0K0 894 aaPredicted RBP10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 CCDC87Q9NVE4 849 aa10.57□□□□□ -0.72
PPFIA2-204ENST00000541017 AIMP1Q12904 312 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms