RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 MBIPQ9NS73 344 aa18.41■□□□□ 0.54
CYB561A3-216ENST00000540755 ADAMTS7Q9UKP4 1686 aa18.41■□□□□ 0.54
CYB561A3-216ENST00000540755 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
CYB561A3-216ENST00000540755 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
CYB561A3-216ENST00000540755 MEGF6O75095 1541 aa18.41■□□□□ 0.54
CYB561A3-216ENST00000540755 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
CYB561A3-216ENST00000540755 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.4■□□□□ 0.54
CYB561A3-216ENST00000540755 CEMIPQ8WUJ3 1361 aa18.4■□□□□ 0.54
CYB561A3-216ENST00000540755 CHL1O00533 1208 aa18.39■□□□□ 0.54
CYB561A3-216ENST00000540755 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.54
CYB561A3-216ENST00000540755 ZNF530Q6P9A1 599 aaPredicted RBP18.39■□□□□ 0.54
CYB561A3-216ENST00000540755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.39■□□□□ 0.54
CYB561A3-216ENST00000540755 ZNF428Q96B54 188 aa18.39■□□□□ 0.53
CYB561A3-216ENST00000540755 CARD10Q9BWT7 1032 aa18.39■□□□□ 0.53
CYB561A3-216ENST00000540755 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
CYB561A3-216ENST00000540755 BCL9O00512 1426 aa18.38■□□□□ 0.53
CYB561A3-216ENST00000540755 BCAR3O75815 825 aa18.37■□□□□ 0.53
CYB561A3-216ENST00000540755 DDB1Q16531 1140 aa18.37■□□□□ 0.53
CYB561A3-216ENST00000540755 C1orf141Q5JVX7 400 aa18.37■□□□□ 0.53
CYB561A3-216ENST00000540755 BABAM1Q9NWV8 329 aa18.37■□□□□ 0.53
CYB561A3-216ENST00000540755 SCN11AQ9UI33 1791 aa18.37■□□□□ 0.53
CYB561A3-216ENST00000540755 SIPA1L3O60292 1781 aaPredicted RBP18.36■□□□□ 0.53
CYB561A3-216ENST00000540755 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
CYB561A3-216ENST00000540755 MARCH10Q8NA82 808 aaPredicted RBP18.36■□□□□ 0.53
CYB561A3-216ENST00000540755 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
CYB561A3-216ENST00000540755 PLIN1O60240 522 aa18.35■□□□□ 0.53
CYB561A3-216ENST00000540755 KDM3BQ7LBC6 1761 aa18.35■□□□□ 0.53
CYB561A3-216ENST00000540755 TNS2Q63HR2 1409 aa18.35■□□□□ 0.53
CYB561A3-216ENST00000540755 ALDH1L2Q3SY69 923 aa18.34■□□□□ 0.53
CYB561A3-216ENST00000540755 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
CYB561A3-216ENST00000540755 CDCA7Q9BWT1 371 aaPredicted RBP18.33■□□□□ 0.53
CYB561A3-216ENST00000540755 SHANK3Q9BYB0 1731 aa18.33■□□□□ 0.52
CYB561A3-216ENST00000540755 VAMP4O75379 141 aa18.33■□□□□ 0.52
CYB561A3-216ENST00000540755 TAF7Q15545 349 aaPredicted RBP18.33■□□□□ 0.52
CYB561A3-216ENST00000540755 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
CYB561A3-216ENST00000540755 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
CYB561A3-216ENST00000540755 TWISTNBQ3B726 338 aaPredicted RBP18.32■□□□□ 0.52
CYB561A3-216ENST00000540755 IL2RBP14784 551 aa18.31■□□□□ 0.52
CYB561A3-216ENST00000540755 PHKG2P15735 406 aa18.31■□□□□ 0.52
CYB561A3-216ENST00000540755 BRPF1P55201 1214 aaPredicted RBP18.31■□□□□ 0.52
CYB561A3-216ENST00000540755 IFNL2Q8IZJ0 200 aa18.31■□□□□ 0.52
CYB561A3-216ENST00000540755 TSPYL6Q8N831 410 aa18.31■□□□□ 0.52
CYB561A3-216ENST00000540755 LGR6Q9HBX8 967 aa18.31■□□□□ 0.52
CYB561A3-216ENST00000540755 PPP4R2Q9NY27 417 aa18.31■□□□□ 0.52
CYB561A3-216ENST00000540755 MPRIPQ6WCQ1 1025 aa18.3■□□□□ 0.52
CYB561A3-216ENST00000540755 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
CYB561A3-216ENST00000540755 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
CYB561A3-216ENST00000540755 BCL11BQ9C0K0 894 aaPredicted RBP18.3■□□□□ 0.52
CYB561A3-216ENST00000540755 SMC4Q9NTJ3 1288 aa18.3■□□□□ 0.52
CYB561A3-216ENST00000540755 NHSQ6T4R5 1651 aa18.29■□□□□ 0.52
CYB561A3-216ENST00000540755 PDE3AQ14432 1141 aa18.29■□□□□ 0.52
CYB561A3-216ENST00000540755 ANO8Q9HCE9 1232 aaPredicted RBP18.29■□□□□ 0.52
CYB561A3-216ENST00000540755 CASZ1Q86V15 1759 aa18.29■□□□□ 0.52
CYB561A3-216ENST00000540755 MRC1P22897 1456 aa18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 KDM6AO15550 1401 aaPredicted RBP18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 PCDH11XQ9BZA7 1347 aa18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 PCDH11YQ9BZA8 1340 aa18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 PLSCR1O15162 318 aa18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 TEFQ10587 303 aa18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 BCL2L13Q9BXK5 485 aa18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 MIS18AQ9NYP9 233 aa18.28■□□□□ 0.52
CYB561A3-216ENST00000540755 SOS1Q07889 1333 aaPredicted RBP18.27■□□□□ 0.52
CYB561A3-216ENST00000540755 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
CYB561A3-216ENST00000540755 KIF16BQ96L93 1317 aa18.27■□□□□ 0.51
CYB561A3-216ENST00000540755 CYP27B1O15528 508 aa18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 CRBNQ96SW2 442 aa18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 CACNA1FO60840 1977 aa18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 ELL2O00472 640 aaPredicted RBP18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 ZKSCAN2Q63HK3 967 aa18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 PROM2Q8N271 834 aa18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 FRAT1Q92837 279 aaPredicted RBP18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 DCAF5Q96JK2 942 aa18.26■□□□□ 0.51
CYB561A3-216ENST00000540755 EXOC5O00471 708 aa18.24■□□□□ 0.51
CYB561A3-216ENST00000540755 MS4A1P11836 297 aa18.24■□□□□ 0.51
CYB561A3-216ENST00000540755 KRT24Q2M2I5 525 aa18.24■□□□□ 0.51
CYB561A3-216ENST00000540755 MRPL50Q8N5N7 158 aaKnown RBP18.24■□□□□ 0.51
CYB561A3-216ENST00000540755 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
CYB561A3-216ENST00000540755 IPO8O15397 1037 aaKnown RBP18.23■□□□□ 0.51
CYB561A3-216ENST00000540755 KCNQ2O43526 872 aa18.22■□□□□ 0.51
CYB561A3-216ENST00000540755 NKX1-1Q15270 411 aaPredicted RBP18.22■□□□□ 0.51
CYB561A3-216ENST00000540755 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
CYB561A3-216ENST00000540755 NOB1Q9ULX3 412 aaKnown RBP18.22■□□□□ 0.51
CYB561A3-216ENST00000540755 PAPPAQ13219 1627 aa18.22■□□□□ 0.51
CYB561A3-216ENST00000540755 ATF7IPQ6VMQ6 1270 aa18.21■□□□□ 0.51
CYB561A3-216ENST00000540755 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
CYB561A3-216ENST00000540755 BTAF1O14981 1849 aa18.21■□□□□ 0.51
CYB561A3-216ENST00000540755 HOXB7P09629 217 aa18.2■□□□□ 0.5
CYB561A3-216ENST00000540755 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
CYB561A3-216ENST00000540755 TRIM27P14373 513 aa18.2■□□□□ 0.5
CYB561A3-216ENST00000540755 TXNRD1Q16881 649 aa18.2■□□□□ 0.5
CYB561A3-216ENST00000540755 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
CYB561A3-216ENST00000540755 PDGFDQ9GZP0 370 aaPredicted RBP18.2■□□□□ 0.5
CYB561A3-216ENST00000540755 TOGARAM1Q9Y4F4 1720 aa18.19■□□□□ 0.5
CYB561A3-216ENST00000540755 PANK1Q8TE04 598 aa18.19■□□□□ 0.5
CYB561A3-216ENST00000540755 HEG1Q9ULI3 1381 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms