RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 COL23A1Q86Y22 540 aaPredicted RBP23.09■■□□□ 1.29
CACNA2D4-211ENST00000540728 U2SURPO15042 1029 aaKnown RBP23.08■■□□□ 1.29
CACNA2D4-211ENST00000540728 YY1P25490 414 aa23.08■■□□□ 1.29
CACNA2D4-211ENST00000540728 MAP3K5Q99683 1374 aa23.08■■□□□ 1.29
CACNA2D4-211ENST00000540728 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.28
CACNA2D4-211ENST00000540728 PHF14O94880 888 aa23.07■■□□□ 1.28
CACNA2D4-211ENST00000540728 FLAD1Q8NFF5 587 aa23.07■■□□□ 1.28
CACNA2D4-211ENST00000540728 ATG3Q9NT62 314 aa23.07■■□□□ 1.28
CACNA2D4-211ENST00000540728 UBR3Q6ZT12 1888 aa23.07■■□□□ 1.28
CACNA2D4-211ENST00000540728 AKAP4Q5JQC9 854 aa23.06■■□□□ 1.28
CACNA2D4-211ENST00000540728 ATP6V1AP38606 617 aa23.05■■□□□ 1.28
CACNA2D4-211ENST00000540728 LINC00116Q8NCU8 138 aa23.04■■□□□ 1.28
CACNA2D4-211ENST00000540728 COL3A1P02461 1466 aaPredicted RBP23.04■■□□□ 1.28
CACNA2D4-211ENST00000540728 PPP2R1AP30153 589 aa23.03■■□□□ 1.28
CACNA2D4-211ENST00000540728 RBM42Q9BTD8 480 aaKnown RBP23.03■■□□□ 1.28
CACNA2D4-211ENST00000540728 NUDCQ9Y266 331 aa23.03■■□□□ 1.28
CACNA2D4-211ENST00000540728 NFATC2IPQ8NCF5 419 aa23.02■■□□□ 1.28
CACNA2D4-211ENST00000540728 GNPATO15228 680 aa23.01■■□□□ 1.27
CACNA2D4-211ENST00000540728 ITPK1Q13572 414 aa23.01■■□□□ 1.27
CACNA2D4-211ENST00000540728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23■■□□□ 1.27
CACNA2D4-211ENST00000540728 MTHFSDQ2M296 383 aaKnown RBP23■■□□□ 1.27
CACNA2D4-211ENST00000540728 AMIGO3Q86WK7 504 aa23■■□□□ 1.27
CACNA2D4-211ENST00000540728 PELP1Q8IZL8 1130 aaKnown RBP23■■□□□ 1.27
CACNA2D4-211ENST00000540728 SCN11AQ9UI33 1791 aa22.99■■□□□ 1.27
CACNA2D4-211ENST00000540728 SMIM5Q71RC9 77 aa22.99■■□□□ 1.27
CACNA2D4-211ENST00000540728 ZNF831Q5JPB2 1677 aa22.98■■□□□ 1.27
CACNA2D4-211ENST00000540728 COL5A3P25940 1745 aaPredicted RBP22.97■■□□□ 1.27
CACNA2D4-211ENST00000540728 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
CACNA2D4-211ENST00000540728 SSFA2P28290 1259 aa22.97■■□□□ 1.27
CACNA2D4-211ENST00000540728 GPR162Q16538 588 aa22.97■■□□□ 1.27
CACNA2D4-211ENST00000540728 NLGN2Q8NFZ4 835 aa22.97■■□□□ 1.27
CACNA2D4-211ENST00000540728 GAS2L2Q8NHY3 880 aa22.97■■□□□ 1.27
CACNA2D4-211ENST00000540728 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
CACNA2D4-211ENST00000540728 SLC52A2Q9HAB3 445 aa22.96■■□□□ 1.27
CACNA2D4-211ENST00000540728 PTCD1O75127 700 aaKnown RBP22.95■■□□□ 1.26
CACNA2D4-211ENST00000540728 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
CACNA2D4-211ENST00000540728 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
CACNA2D4-211ENST00000540728 SLC4A9Q96Q91 983 aa22.94■■□□□ 1.26
CACNA2D4-211ENST00000540728 VIRMAQ69YN4 1812 aaKnown RBP22.94■■□□□ 1.26
CACNA2D4-211ENST00000540728 UTRNP46939 3433 aa22.92■■□□□ 1.26
CACNA2D4-211ENST00000540728 PRKAR2BP31323 418 aa22.92■■□□□ 1.26
CACNA2D4-211ENST00000540728 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
CACNA2D4-211ENST00000540728 RTCBQ9Y3I0 505 aaKnown RBP22.92■■□□□ 1.26
CACNA2D4-211ENST00000540728 MRC1P22897 1456 aa22.92■■□□□ 1.26
CACNA2D4-211ENST00000540728 TJP1Q07157 1748 aa22.91■■□□□ 1.26
CACNA2D4-211ENST00000540728 CHD4Q14839 1912 aa22.91■■□□□ 1.26
CACNA2D4-211ENST00000540728 GNAT3A8MTJ3 354 aa22.91■■□□□ 1.26
CACNA2D4-211ENST00000540728 RSPH6AQ9H0K4 717 aa22.91■■□□□ 1.26
CACNA2D4-211ENST00000540728 CNTNAP4Q9C0A0 1308 aa22.9■■□□□ 1.26
CACNA2D4-211ENST00000540728 TRAPPC3LQ5T215 181 aa22.9■■□□□ 1.26
CACNA2D4-211ENST00000540728 FCHSD2O94868 740 aa22.89■■□□□ 1.25
CACNA2D4-211ENST00000540728 TEFQ10587 303 aa22.89■■□□□ 1.25
CACNA2D4-211ENST00000540728 DDX10Q13206 875 aaKnown RBP22.89■■□□□ 1.25
CACNA2D4-211ENST00000540728 CICQ96RK0 1608 aaPredicted RBP22.89■■□□□ 1.25
CACNA2D4-211ENST00000540728 C4AP0C0L4 1744 aa22.88■■□□□ 1.25
CACNA2D4-211ENST00000540728 ADAMTS7Q9UKP4 1686 aa22.87■■□□□ 1.25
CACNA2D4-211ENST00000540728 RPS6KA4O75676 772 aa22.87■■□□□ 1.25
CACNA2D4-211ENST00000540728 ADRA2BP18089 450 aa22.87■■□□□ 1.25
CACNA2D4-211ENST00000540728 PHACTR3Q96KR7 559 aa22.87■■□□□ 1.25
CACNA2D4-211ENST00000540728 GOLGB1Q14789 3259 aaKnown RBP22.86■■□□□ 1.25
CACNA2D4-211ENST00000540728 NEFMP07197 916 aa22.86■■□□□ 1.25
CACNA2D4-211ENST00000540728 SLC39A6Q13433 755 aa22.86■■□□□ 1.25
CACNA2D4-211ENST00000540728 RALBP1Q15311 655 aa22.86■■□□□ 1.25
CACNA2D4-211ENST00000540728 CD2APQ9Y5K6 639 aa22.86■■□□□ 1.25
CACNA2D4-211ENST00000540728 ZEB1P37275 1124 aaPredicted RBP22.85■■□□□ 1.25
CACNA2D4-211ENST00000540728 CRKLP46109 303 aaKnown RBP22.85■■□□□ 1.25
CACNA2D4-211ENST00000540728 TTC5Q8N0Z6 440 aa22.85■■□□□ 1.25
CACNA2D4-211ENST00000540728 IL17REQ8NFR9 667 aa22.85■■□□□ 1.25
CACNA2D4-211ENST00000540728 MYH14Q7Z406 1995 aaKnown RBP22.84■■□□□ 1.25
CACNA2D4-211ENST00000540728 RFC4P35249 363 aa22.84■■□□□ 1.25
CACNA2D4-211ENST00000540728 MMP10P09238 476 aa22.83■■□□□ 1.25
CACNA2D4-211ENST00000540728 RTF1Q92541 710 aaKnown RBP22.83■■□□□ 1.25
CACNA2D4-211ENST00000540728 KCPQ6ZWJ8 1503 aa22.82■■□□□ 1.24
CACNA2D4-211ENST00000540728 YBX3P16989 372 aaKnown RBP eCLIP22.82■■□□□ 1.24
CACNA2D4-211ENST00000540728 DNAJC10Q8IXB1 793 aa22.82■■□□□ 1.24
CACNA2D4-211ENST00000540728 ARHGEF1Q92888 912 aaKnown RBP22.82■■□□□ 1.24
CACNA2D4-211ENST00000540728 VSIG10Q8N0Z9 540 aa22.81■■□□□ 1.24
CACNA2D4-211ENST00000540728 NLGN1Q8N2Q7 840 aa22.81■■□□□ 1.24
CACNA2D4-211ENST00000540728 ZNF784Q8NCA9 323 aaPredicted RBP22.8■■□□□ 1.24
CACNA2D4-211ENST00000540728 PNNQ9H307 717 aaKnown RBP22.8■■□□□ 1.24
CACNA2D4-211ENST00000540728 CCDC87Q9NVE4 849 aa22.8■■□□□ 1.24
CACNA2D4-211ENST00000540728 WWC3Q9ULE0 1092 aa22.8■■□□□ 1.24
CACNA2D4-211ENST00000540728 UBR2Q8IWV8 1755 aa22.79■■□□□ 1.24
CACNA2D4-211ENST00000540728 GRIN3BO60391 1043 aa22.78■■□□□ 1.24
CACNA2D4-211ENST00000540728 ZNF790Q6PG37 636 aa22.78■■□□□ 1.24
CACNA2D4-211ENST00000540728 CEMIPQ8WUJ3 1361 aa22.77■■□□□ 1.24
CACNA2D4-211ENST00000540728 HTATSF1O43719 755 aaKnown RBP22.77■■□□□ 1.24
CACNA2D4-211ENST00000540728 GYS1P13807 737 aa22.77■■□□□ 1.24
CACNA2D4-211ENST00000540728 INTS5Q6P9B9 1019 aaKnown RBP22.77■■□□□ 1.24
CACNA2D4-211ENST00000540728 BTBD11A6QL63 1104 aa22.76■■□□□ 1.23
CACNA2D4-211ENST00000540728 CYP19A1P11511 503 aaPredicted RBP22.76■■□□□ 1.23
CACNA2D4-211ENST00000540728 STARD3NLO95772 234 aa22.75■■□□□ 1.23
CACNA2D4-211ENST00000540728 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
CACNA2D4-211ENST00000540728 SRP68Q9UHB9 627 aaKnown RBP22.75■■□□□ 1.23
CACNA2D4-211ENST00000540728 SIPA1L3O60292 1781 aaPredicted RBP22.75■■□□□ 1.23
CACNA2D4-211ENST00000540728 KIF13BQ9NQT8 1826 aa22.75■■□□□ 1.23
CACNA2D4-211ENST00000540728 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
CACNA2D4-211ENST00000540728 MCM10Q7L590 875 aa22.74■■□□□ 1.23
CACNA2D4-211ENST00000540728 ZNF496Q96IT1 587 aaPredicted RBP22.74■■□□□ 1.23
CACNA2D4-211ENST00000540728 FMNL2Q96PY5 1086 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms