RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 TBC1D9Q6ZT07 1266 aa7.84□□□□□ -1.15
MDM2-227ENST00000540709 FAM181BA6NEQ2 426 aa7.83□□□□□ -1.16
MDM2-227ENST00000540709 INHAP05111 366 aa7.83□□□□□ -1.16
MDM2-227ENST00000540709 SCNN1DP51172 638 aa7.83□□□□□ -1.16
MDM2-227ENST00000540709 KRT76Q01546 638 aa7.83□□□□□ -1.16
MDM2-227ENST00000540709 DBN1Q16643 649 aa7.83□□□□□ -1.16
MDM2-227ENST00000540709 RNFT1Q5M7Z0 435 aa7.83□□□□□ -1.16
MDM2-227ENST00000540709 FOXR1Q6PIV2 292 aa7.83□□□□□ -1.16
MDM2-227ENST00000540709 GTPBP3Q969Y2 492 aaKnown RBP7.83□□□□□ -1.16
MDM2-227ENST00000540709 AIDAQ96BJ3 306 aa7.83□□□□□ -1.16
MDM2-227ENST00000540709 H7C1W4 665 aa7.82□□□□□ -1.16
MDM2-227ENST00000540709 F11P03951 625 aa7.82□□□□□ -1.16
MDM2-227ENST00000540709 C4orf17Q53FE4 359 aa7.82□□□□□ -1.16
MDM2-227ENST00000540709 TRIM22Q8IYM9 498 aa7.82□□□□□ -1.16
MDM2-227ENST00000540709 NFATC2IPQ8NCF5 419 aa7.82□□□□□ -1.16
MDM2-227ENST00000540709 GLMNQ92990 594 aa7.82□□□□□ -1.16
MDM2-227ENST00000540709 ZNF837Q96EG3 531 aaPredicted RBP7.82□□□□□ -1.16
MDM2-227ENST00000540709 CALR3Q96L12 384 aaKnown RBP7.82□□□□□ -1.16
MDM2-227ENST00000540709 FHDC1Q9C0D6 1143 aaPredicted RBP7.82□□□□□ -1.16
MDM2-227ENST00000540709 PCDHGA11Q9Y5H2 935 aa7.82□□□□□ -1.16
MDM2-227ENST00000540709 HRH3Q9Y5N1 445 aa7.82□□□□□ -1.16
MDM2-227ENST00000540709 PLA2G4AP47712 749 aa7.81□□□□□ -1.16
MDM2-227ENST00000540709 SMTNP53814 917 aa7.81□□□□□ -1.16
MDM2-227ENST00000540709 RHBDD1Q8TEB9 315 aa7.81□□□□□ -1.16
MDM2-227ENST00000540709 UCN2Q96RP3 112 aa7.81□□□□□ -1.16
MDM2-227ENST00000540709 USP17L3A6NCW0 530 aa7.8□□□□□ -1.16
MDM2-227ENST00000540709 USP17L4A6NCW7 530 aa7.8□□□□□ -1.16
MDM2-227ENST00000540709 TMEM229AB2RXF0 380 aa7.8□□□□□ -1.16
MDM2-227ENST00000540709 LZTS3O60299 673 aaPredicted RBP7.8□□□□□ -1.16
MDM2-227ENST00000540709 WDR44Q5JSH3 913 aa7.8□□□□□ -1.16
MDM2-227ENST00000540709 USP17L2Q6R6M4 530 aa7.8□□□□□ -1.16
MDM2-227ENST00000540709 USP17L1Q7RTZ2 530 aa7.8□□□□□ -1.16
MDM2-227ENST00000540709 PPARGC1BQ86YN6 1023 aaKnown RBP7.8□□□□□ -1.16
MDM2-227ENST00000540709 FNBP4Q8N3X1 1017 aaPredicted RBP7.8□□□□□ -1.16
MDM2-227ENST00000540709 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.8□□□□□ -1.16
MDM2-227ENST00000540709 NUCKS1Q9H1E3 243 aaKnown RBP7.8□□□□□ -1.16
MDM2-227ENST00000540709 RUBCNLQ9H714 662 aa7.8□□□□□ -1.16
MDM2-227ENST00000540709 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
MDM2-227ENST00000540709 ATP9BO43861 1147 aa7.79□□□□□ -1.16
MDM2-227ENST00000540709 CSB-PGBD3P0DP91 1061 aa7.79□□□□□ -1.16
MDM2-227ENST00000540709 LORP23490 312 aaPredicted RBP7.79□□□□□ -1.16
MDM2-227ENST00000540709 TRIM50Q86XT4 487 aa7.79□□□□□ -1.16
MDM2-227ENST00000540709 PGBD3Q8N328 593 aa7.79□□□□□ -1.16
MDM2-227ENST00000540709 TRERF1Q96PN7 1200 aa7.79□□□□□ -1.16
MDM2-227ENST00000540709 CABP1Q9NZU7 370 aa7.79□□□□□ -1.16
MDM2-227ENST00000540709 TFIP11Q9UBB9 837 aaKnown RBP7.79□□□□□ -1.16
MDM2-227ENST00000540709 ZNF777Q9ULD5 760 aaPredicted RBP7.79□□□□□ -1.16
MDM2-227ENST00000540709 A6NJR5 290 aa7.78□□□□□ -1.16
MDM2-227ENST00000540709 A6NJY4 79 aa7.78□□□□□ -1.16
MDM2-227ENST00000540709 MSX1P28360 303 aa7.78□□□□□ -1.16
MDM2-227ENST00000540709 TPCN2Q8NHX9 752 aa7.78□□□□□ -1.16
MDM2-227ENST00000540709 NIFKQ9BYG3 293 aaKnown RBP7.78□□□□□ -1.16
MDM2-227ENST00000540709 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
MDM2-227ENST00000540709 BACH1O14867 736 aa7.77□□□□□ -1.17
MDM2-227ENST00000540709 GMCL1Q96IK5 515 aa7.77□□□□□ -1.17
MDM2-227ENST00000540709 ZNF594Q96JF6 807 aaPredicted RBP7.77□□□□□ -1.17
MDM2-227ENST00000540709 ZNF358Q9NW07 568 aa7.77□□□□□ -1.17
MDM2-227ENST00000540709 RBM19Q9Y4C8 960 aaKnown RBP7.77□□□□□ -1.17
MDM2-227ENST00000540709 PARP3Q9Y6F1 533 aa7.77□□□□□ -1.17
MDM2-227ENST00000540709 ADAMTS2O95450 1211 aa7.76□□□□□ -1.17
MDM2-227ENST00000540709 ATP1A2P50993 1020 aa7.76□□□□□ -1.17
MDM2-227ENST00000540709 GAS6Q14393 721 aa7.76□□□□□ -1.17
MDM2-227ENST00000540709 TBCELQ5QJ74 424 aa7.76□□□□□ -1.17
MDM2-227ENST00000540709 CCDC102BQ68D86 513 aa7.76□□□□□ -1.17
MDM2-227ENST00000540709 TNS4Q8IZW8 715 aa7.76□□□□□ -1.17
MDM2-227ENST00000540709 SVOPQ8N4V2 548 aa7.76□□□□□ -1.17
MDM2-227ENST00000540709 OGFOD1Q8N543 542 aa7.76□□□□□ -1.17
MDM2-227ENST00000540709 DNAAF2Q9NVR5 837 aaKnown RBP7.76□□□□□ -1.17
MDM2-227ENST00000540709 ARSJQ5FYB0 599 aaPredicted RBP7.75□□□□□ -1.17
MDM2-227ENST00000540709 EFHC2Q5JST6 749 aa7.75□□□□□ -1.17
MDM2-227ENST00000540709 WHAMMQ8TF30 809 aa7.75□□□□□ -1.17
MDM2-227ENST00000540709 SLC4A9Q96Q91 983 aa7.75□□□□□ -1.17
MDM2-227ENST00000540709 KIAA1024Q9UPX6 916 aa7.75□□□□□ -1.17
MDM2-227ENST00000540709 USP3Q9Y6I4 520 aa7.75□□□□□ -1.17
MDM2-227ENST00000540709 PALM3A6NDB9 673 aaPredicted RBP7.74□□□□□ -1.17
MDM2-227ENST00000540709 CDK2AP1O14519 115 aa7.74□□□□□ -1.17
MDM2-227ENST00000540709 ZBTB7BO15156 539 aaPredicted RBP7.74□□□□□ -1.17
MDM2-227ENST00000540709 RASA1P20936 1047 aa7.74□□□□□ -1.17
MDM2-227ENST00000540709 CLDN10P78369 228 aa7.74□□□□□ -1.17
MDM2-227ENST00000540709 PLEKHM2Q8IWE5 1019 aa7.74□□□□□ -1.17
MDM2-227ENST00000540709 ZNF232Q9UNY5 417 aa7.74□□□□□ -1.17
MDM2-227ENST00000540709 MX2P20592 715 aa7.73□□□□□ -1.17
MDM2-227ENST00000540709 LMOD1P29536 600 aaPredicted RBP7.73□□□□□ -1.17
MDM2-227ENST00000540709 NBPF1Q3BBV0 1214 aa7.73□□□□□ -1.17
MDM2-227ENST00000540709 MBIPQ9NS73 344 aa7.73□□□□□ -1.17
MDM2-227ENST00000540709 MAFBQ9Y5Q3 323 aaPredicted RBP7.73□□□□□ -1.17
MDM2-227ENST00000540709 IGF1RP08069 1367 aa7.72□□□□□ -1.17
MDM2-227ENST00000540709 TATP17735 454 aaPredicted RBP7.72□□□□□ -1.17
MDM2-227ENST00000540709 SRSF11Q05519 484 aaKnown RBP7.72□□□□□ -1.17
MDM2-227ENST00000540709 ZNF385CQ66K41 422 aaPredicted RBP7.72□□□□□ -1.17
MDM2-227ENST00000540709 BICDL1Q6ZP65 573 aa7.72□□□□□ -1.17
MDM2-227ENST00000540709 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
MDM2-227ENST00000540709 GJA3Q9Y6H8 435 aa7.72□□□□□ -1.17
MDM2-227ENST00000540709 SFI1A8K8P3 1242 aa7.71□□□□□ -1.18
MDM2-227ENST00000540709 MTFR1Q15390 333 aa7.71□□□□□ -1.18
MDM2-227ENST00000540709 LARP1Q6PKG0 1096 aaKnown RBP7.71□□□□□ -1.18
MDM2-227ENST00000540709 LYPD4Q6UWN0 246 aa7.71□□□□□ -1.18
MDM2-227ENST00000540709 SLC9A9Q8IVB4 645 aa7.71□□□□□ -1.18
MDM2-227ENST00000540709 SCHIP1Q9P0W5 487 aaPredicted RBP7.71□□□□□ -1.18
MDM2-227ENST00000540709 NSFL1CQ9UNZ2 370 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms