RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 CCER2I3L3R5 266 aa22.25■■□□□ 1.15
UBC-208ENST00000540700 PRKAR2BP31323 418 aa22.25■■□□□ 1.15
UBC-208ENST00000540700 ZCRB1Q8TBF4 217 aaKnown RBP22.25■■□□□ 1.15
UBC-208ENST00000540700 PLEKHF1Q96S99 279 aa22.25■■□□□ 1.15
UBC-208ENST00000540700 QSER1Q2KHR3 1735 aa22.24■■□□□ 1.15
UBC-208ENST00000540700 PHACTR3Q96KR7 559 aa22.24■■□□□ 1.15
UBC-208ENST00000540700 TUBGCP6Q96RT7 1819 aa22.23■■□□□ 1.15
UBC-208ENST00000540700 FCHSD2O94868 740 aa22.22■■□□□ 1.15
UBC-208ENST00000540700 ZNF526Q8TF50 670 aaPredicted RBP22.22■■□□□ 1.15
UBC-208ENST00000540700 COL24A1Q17RW2 1714 aa22.22■■□□□ 1.15
UBC-208ENST00000540700 CYP27B1O15528 508 aa22.21■■□□□ 1.15
UBC-208ENST00000540700 WDR43Q15061 677 aaKnown RBP eCLIP22.21■■□□□ 1.15
UBC-208ENST00000540700 GPBP1L1Q9HC44 474 aaPredicted RBP22.21■■□□□ 1.15
UBC-208ENST00000540700 MTHFSDQ2M296 383 aaKnown RBP22.2■■□□□ 1.14
UBC-208ENST00000540700 CCDC146Q8IYE0 955 aa22.2■■□□□ 1.14
UBC-208ENST00000540700 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
UBC-208ENST00000540700 DOT1LQ8TEK3 1739 aa22.2■■□□□ 1.14
UBC-208ENST00000540700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.18■■□□□ 1.14
UBC-208ENST00000540700 WWC3Q9ULE0 1092 aa22.18■■□□□ 1.14
UBC-208ENST00000540700 PHKG2P15735 406 aa22.16■■□□□ 1.14
UBC-208ENST00000540700 PLEKHO1Q53GL0 409 aaPredicted RBP22.16■■□□□ 1.14
UBC-208ENST00000540700 CD2APQ9Y5K6 639 aa22.16■■□□□ 1.14
UBC-208ENST00000540700 LY75O60449 1722 aa22.16■■□□□ 1.14
UBC-208ENST00000540700 PCDH11XQ9BZA7 1347 aa22.15■■□□□ 1.14
UBC-208ENST00000540700 PCDH11YQ9BZA8 1340 aa22.15■■□□□ 1.14
UBC-208ENST00000540700 AMOTQ4VCS5 1084 aa22.15■■□□□ 1.14
UBC-208ENST00000540700 ZNF530Q6P9A1 599 aaPredicted RBP22.15■■□□□ 1.14
UBC-208ENST00000540700 FAM9BQ8IZU0 186 aa22.15■■□□□ 1.14
UBC-208ENST00000540700 SPG7Q9UQ90 795 aa22.15■■□□□ 1.14
UBC-208ENST00000540700 HSPA6P17066 643 aa22.13■■□□□ 1.13
UBC-208ENST00000540700 TOGARAM1Q9Y4F4 1720 aa22.13■■□□□ 1.13
UBC-208ENST00000540700 KDM6AO15550 1401 aaPredicted RBP22.13■■□□□ 1.13
UBC-208ENST00000540700 RUNDC1Q96C34 613 aa22.12■■□□□ 1.13
UBC-208ENST00000540700 NKX1-1Q15270 411 aaPredicted RBP22.11■■□□□ 1.13
UBC-208ENST00000540700 MPRIPQ6WCQ1 1025 aa22.11■■□□□ 1.13
UBC-208ENST00000540700 IFNL2Q8IZJ0 200 aa22.11■■□□□ 1.13
UBC-208ENST00000540700 FLAD1Q8NFF5 587 aa22.11■■□□□ 1.13
UBC-208ENST00000540700 PHF14O94880 888 aa22.1■■□□□ 1.13
UBC-208ENST00000540700 SMIM5Q71RC9 77 aa22.1■■□□□ 1.13
UBC-208ENST00000540700 ADCY9O60503 1353 aa22.1■■□□□ 1.13
UBC-208ENST00000540700 PALLDQ8WX93 1383 aa22.1■■□□□ 1.13
UBC-208ENST00000540700 AKAP4Q5JQC9 854 aa22.09■■□□□ 1.13
UBC-208ENST00000540700 GAS2L2Q8NHY3 880 aa22.09■■□□□ 1.13
UBC-208ENST00000540700 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
UBC-208ENST00000540700 ADAMTS7Q9UKP4 1686 aa22.08■■□□□ 1.13
UBC-208ENST00000540700 NFE2L2Q16236 605 aa22.08■■□□□ 1.13
UBC-208ENST00000540700 AMIGO3Q86WK7 504 aa22.08■■□□□ 1.13
UBC-208ENST00000540700 AK7Q96M32 723 aa22.08■■□□□ 1.13
UBC-208ENST00000540700 MAPK8IP3Q9UPT6 1336 aa22.07■■□□□ 1.12
UBC-208ENST00000540700 APAF1O14727 1248 aa22.07■■□□□ 1.12
UBC-208ENST00000540700 TMPOP42166 694 aaKnown RBP22.07■■□□□ 1.12
UBC-208ENST00000540700 PNNQ9H307 717 aaKnown RBP22.07■■□□□ 1.12
UBC-208ENST00000540700 LGR6Q9HBX8 967 aa22.07■■□□□ 1.12
UBC-208ENST00000540700 C1orf141Q5JVX7 400 aa22.05■■□□□ 1.12
UBC-208ENST00000540700 IL17REQ8NFR9 667 aa22.05■■□□□ 1.12
UBC-208ENST00000540700 DLG5Q8TDM6 1919 aa22.05■■□□□ 1.12
UBC-208ENST00000540700 C5P01031 1676 aa22.04■■□□□ 1.12
UBC-208ENST00000540700 DCTN1Q14203 1278 aa22.04■■□□□ 1.12
UBC-208ENST00000540700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.03■■□□□ 1.12
UBC-208ENST00000540700 GNAT3A8MTJ3 354 aa22.03■■□□□ 1.12
UBC-208ENST00000540700 RNMTO43148 476 aaKnown RBP22.03■■□□□ 1.12
UBC-208ENST00000540700 HMGB2P26583 209 aaKnown RBP22.03■■□□□ 1.12
UBC-208ENST00000540700 TRIM35Q9UPQ4 493 aa22.03■■□□□ 1.12
UBC-208ENST00000540700 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.12
UBC-208ENST00000540700 RIPK4P57078 832 aa22.02■■□□□ 1.12
UBC-208ENST00000540700 NEUROD2Q15784 382 aa22.02■■□□□ 1.12
UBC-208ENST00000540700 MCM10Q7L590 875 aa22.02■■□□□ 1.12
UBC-208ENST00000540700 DCAF5Q96JK2 942 aa22.02■■□□□ 1.12
UBC-208ENST00000540700 THUMPD2Q9BTF0 503 aaKnown RBP22.02■■□□□ 1.12
UBC-208ENST00000540700 CEMIPQ8WUJ3 1361 aa22.01■■□□□ 1.11
UBC-208ENST00000540700 KIF3CO14782 793 aa22.01■■□□□ 1.11
UBC-208ENST00000540700 NEFMP07197 916 aa22.01■■□□□ 1.11
UBC-208ENST00000540700 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
UBC-208ENST00000540700 MRC1P22897 1456 aa22.01■■□□□ 1.11
UBC-208ENST00000540700 HSP90AB1P08238 724 aaKnown RBP22■■□□□ 1.11
UBC-208ENST00000540700 VIRMAQ69YN4 1812 aaKnown RBP21.99■■□□□ 1.11
UBC-208ENST00000540700 PIGBQ92521 554 aa21.99■■□□□ 1.11
UBC-208ENST00000540700 C4BP0C0L5 1744 aa21.98■■□□□ 1.11
UBC-208ENST00000540700 ITGB4P16144 1822 aa21.98■■□□□ 1.11
UBC-208ENST00000540700 LINC00116Q8NCU8 138 aa21.97■■□□□ 1.11
UBC-208ENST00000540700 ERVV-2B6SEH9 535 aa21.96■■□□□ 1.11
UBC-208ENST00000540700 HTATSF1O43719 755 aaKnown RBP21.96■■□□□ 1.11
UBC-208ENST00000540700 SIPA1L3O60292 1781 aaPredicted RBP21.95■■□□□ 1.1
UBC-208ENST00000540700 SSFA2P28290 1259 aa21.95■■□□□ 1.1
UBC-208ENST00000540700 SLC52A2Q9HAB3 445 aa21.95■■□□□ 1.1
UBC-208ENST00000540700 SALL2Q9Y467 1007 aaPredicted RBP21.95■■□□□ 1.1
UBC-208ENST00000540700 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
UBC-208ENST00000540700 LOC102724428A0A0B4J2F2 783 aa21.94■■□□□ 1.1
UBC-208ENST00000540700 GNPATO15228 680 aa21.94■■□□□ 1.1
UBC-208ENST00000540700 SIK1P57059 783 aa21.94■■□□□ 1.1
UBC-208ENST00000540700 NFATC2IPQ8NCF5 419 aa21.94■■□□□ 1.1
UBC-208ENST00000540700 APLP1P51693 650 aa21.93■■□□□ 1.1
UBC-208ENST00000540700 CABP4P57796 275 aa21.93■■□□□ 1.1
UBC-208ENST00000540700 RTF1Q92541 710 aaKnown RBP21.93■■□□□ 1.1
UBC-208ENST00000540700 MMP10P09238 476 aa21.92■■□□□ 1.1
UBC-208ENST00000540700 TMOD3Q9NYL9 352 aa21.92■■□□□ 1.1
UBC-208ENST00000540700 ITPK1Q13572 414 aa21.91■■□□□ 1.1
UBC-208ENST00000540700 BCS1LQ9Y276 419 aa21.91■■□□□ 1.1
UBC-208ENST00000540700 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
UBC-208ENST00000540700 CCDC27Q2M243 656 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms