RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 CPS1P31327 1500 aa13.65□□□□□ -0.22
CPT1A-206ENST00000540367 RNF214Q8ND24 703 aa13.65□□□□□ -0.22
CPT1A-206ENST00000540367 SYAP1Q96A49 352 aaPredicted RBP13.65□□□□□ -0.22
CPT1A-206ENST00000540367 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.22
CPT1A-206ENST00000540367 COG3Q96JB2 828 aa13.65□□□□□ -0.22
CPT1A-206ENST00000540367 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
CPT1A-206ENST00000540367 C3P01024 1663 aa13.65□□□□□ -0.22
CPT1A-206ENST00000540367 LTKP29376 864 aa13.64□□□□□ -0.23
CPT1A-206ENST00000540367 MCCP23508 829 aa13.64□□□□□ -0.23
CPT1A-206ENST00000540367 ESYT1Q9BSJ8 1104 aa13.64□□□□□ -0.23
CPT1A-206ENST00000540367 MIS18AQ9NYP9 233 aa13.64□□□□□ -0.23
CPT1A-206ENST00000540367 AGLP35573 1532 aa13.63□□□□□ -0.23
CPT1A-206ENST00000540367 ANAPC15P60006 121 aa13.63□□□□□ -0.23
CPT1A-206ENST00000540367 AKAP12Q02952 1782 aa13.63□□□□□ -0.23
CPT1A-206ENST00000540367 SPATA31D1Q6ZQQ2 1576 aa13.63□□□□□ -0.23
CPT1A-206ENST00000540367 SALL3Q9BXA9 1300 aa13.63□□□□□ -0.23
CPT1A-206ENST00000540367 KIAA2012Q0VF49 1180 aa13.63□□□□□ -0.23
CPT1A-206ENST00000540367 MCM10Q7L590 875 aa13.63□□□□□ -0.23
CPT1A-206ENST00000540367 SSH2Q76I76 1423 aa13.62□□□□□ -0.23
CPT1A-206ENST00000540367 PHF14O94880 888 aa13.62□□□□□ -0.23
CPT1A-206ENST00000540367 PTMAP06454 111 aaKnown RBP13.62□□□□□ -0.23
CPT1A-206ENST00000540367 ITSN1Q15811 1721 aa13.62□□□□□ -0.23
CPT1A-206ENST00000540367 WASLO00401 505 aaPredicted RBP13.62□□□□□ -0.23
CPT1A-206ENST00000540367 IL17RAQ96F46 866 aa13.62□□□□□ -0.23
CPT1A-206ENST00000540367 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.61□□□□□ -0.23
CPT1A-206ENST00000540367 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
CPT1A-206ENST00000540367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.61□□□□□ -0.23
CPT1A-206ENST00000540367 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
CPT1A-206ENST00000540367 CCT4P50991 539 aaKnown RBP13.6□□□□□ -0.23
CPT1A-206ENST00000540367 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
CPT1A-206ENST00000540367 NUDT16Q96DE0 195 aaKnown RBP13.6□□□□□ -0.23
CPT1A-206ENST00000540367 NRXN3Q9Y4C0 1643 aa13.6□□□□□ -0.23
CPT1A-206ENST00000540367 SULT6B1Q6IMI4 303 aa13.59□□□□□ -0.23
CPT1A-206ENST00000540367 CRB1P82279 1406 aa13.59□□□□□ -0.23
CPT1A-206ENST00000540367 TNRQ92752 1358 aa13.59□□□□□ -0.23
CPT1A-206ENST00000540367 EIF4A2Q14240 407 aaKnown RBP13.59□□□□□ -0.23
CPT1A-206ENST00000540367 UVSSAQ2YD98 709 aa13.59□□□□□ -0.23
CPT1A-206ENST00000540367 RGPD1P0DJD0 1748 aa13.59□□□□□ -0.23
CPT1A-206ENST00000540367 MX1P20591 662 aa13.58□□□□□ -0.23
CPT1A-206ENST00000540367 CHMLP26374 656 aa13.58□□□□□ -0.23
CPT1A-206ENST00000540367 ANO2Q9NQ90 1003 aa13.58□□□□□ -0.23
CPT1A-206ENST00000540367 EXOC6BQ9Y2D4 811 aa13.58□□□□□ -0.23
CPT1A-206ENST00000540367 WDR33Q9C0J8 1336 aaKnown RBP13.58□□□□□ -0.24
CPT1A-206ENST00000540367 GADD45BO75293 160 aaPredicted RBP13.58□□□□□ -0.24
CPT1A-206ENST00000540367 GNAI2P04899 355 aa13.58□□□□□ -0.24
CPT1A-206ENST00000540367 TSHZ3Q63HK5 1081 aa13.58□□□□□ -0.24
CPT1A-206ENST00000540367 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
CPT1A-206ENST00000540367 MYRIPQ8NFW9 859 aa13.58□□□□□ -0.24
CPT1A-206ENST00000540367 RBM33Q96EV2 1170 aaKnown RBP13.58□□□□□ -0.24
CPT1A-206ENST00000540367 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
CPT1A-206ENST00000540367 PRDM4Q9UKN5 801 aa13.58□□□□□ -0.24
CPT1A-206ENST00000540367 PRR36Q9H6K5 1346 aa13.58□□□□□ -0.24
CPT1A-206ENST00000540367 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.24
CPT1A-206ENST00000540367 FOXO3O43524 673 aa13.57□□□□□ -0.24
CPT1A-206ENST00000540367 TMEM87AQ8NBN3 555 aa13.57□□□□□ -0.24
CPT1A-206ENST00000540367 SLC4A10Q6U841 1118 aa13.57□□□□□ -0.24
CPT1A-206ENST00000540367 USP48Q86UV5 1035 aa13.57□□□□□ -0.24
CPT1A-206ENST00000540367 SMAP1Q8IYB5 467 aaPredicted RBP13.57□□□□□ -0.24
CPT1A-206ENST00000540367 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
CPT1A-206ENST00000540367 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
CPT1A-206ENST00000540367 ARHGEF10O15013 1369 aa13.57□□□□□ -0.24
CPT1A-206ENST00000540367 F6X3S4 739 aa13.56□□□□□ -0.24
CPT1A-206ENST00000540367 G2E3Q7L622 706 aa13.56□□□□□ -0.24
CPT1A-206ENST00000540367 GDPD2Q9HCC8 539 aa13.56□□□□□ -0.24
CPT1A-206ENST00000540367 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
CPT1A-206ENST00000540367 HSP90AB2PQ58FF8 381 aa13.56□□□□□ -0.24
CPT1A-206ENST00000540367 PRIMPOLQ96LW4 560 aa13.56□□□□□ -0.24
CPT1A-206ENST00000540367 STAP2Q9UGK3 403 aa13.56□□□□□ -0.24
CPT1A-206ENST00000540367 CCDC61Q9Y6R9 512 aa13.56□□□□□ -0.24
CPT1A-206ENST00000540367 RPAP1Q9BWH6 1393 aaPredicted RBP13.56□□□□□ -0.24
CPT1A-206ENST00000540367 TCHHQ07283 1943 aa13.56□□□□□ -0.24
CPT1A-206ENST00000540367 NECTIN2Q92692 538 aa13.55□□□□□ -0.24
CPT1A-206ENST00000540367 RILPL2Q969X0 211 aa13.55□□□□□ -0.24
CPT1A-206ENST00000540367 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
CPT1A-206ENST00000540367 TRIM6-TRIM34B2RNG4 842 aa13.55□□□□□ -0.24
CPT1A-206ENST00000540367 CCDC183Q5T5S1 534 aa13.55□□□□□ -0.24
CPT1A-206ENST00000540367 SRCIN1Q9C0H9 1055 aa13.55□□□□□ -0.24
CPT1A-206ENST00000540367 PEAK1Q9H792 1746 aa13.55□□□□□ -0.24
CPT1A-206ENST00000540367 XRN1Q8IZH2 1706 aaKnown RBP13.54□□□□□ -0.24
CPT1A-206ENST00000540367 FOXD4L6Q3SYB3 417 aaPredicted RBP13.54□□□□□ -0.24
CPT1A-206ENST00000540367 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
CPT1A-206ENST00000540367 FOXD4L3Q6VB84 417 aaPredicted RBP13.54□□□□□ -0.24
CPT1A-206ENST00000540367 USP25Q9UHP3 1055 aa13.54□□□□□ -0.24
CPT1A-206ENST00000540367 AOX1Q06278 1338 aa13.54□□□□□ -0.24
CPT1A-206ENST00000540367 TMEM2Q9UHN6 1383 aa13.54□□□□□ -0.24
CPT1A-206ENST00000540367 FAM208AQ9UK61 1670 aaKnown RBP13.54□□□□□ -0.24
CPT1A-206ENST00000540367 N4BP2Q86UW6 1770 aaPredicted RBP13.54□□□□□ -0.24
CPT1A-206ENST00000540367 HMGN5P82970 282 aaKnown RBP13.54□□□□□ -0.24
CPT1A-206ENST00000540367 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
CPT1A-206ENST00000540367 NALCNQ8IZF0 1738 aa13.54□□□□□ -0.24
CPT1A-206ENST00000540367 LETM1O95202 739 aaPredicted RBP13.53□□□□□ -0.24
CPT1A-206ENST00000540367 GNAI3P08754 354 aa13.53□□□□□ -0.24
CPT1A-206ENST00000540367 GTF2F1P35269 517 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPT1A-206ENST00000540367 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPT1A-206ENST00000540367 OVOS2A0A0J9YW53 1432 aa13.53□□□□□ -0.24
CPT1A-206ENST00000540367 OVOS2Q6IE36 1432 aa13.53□□□□□ -0.24
CPT1A-206ENST00000540367 PNMA6EA0A0J9YXQ4 647 aa13.53□□□□□ -0.24
CPT1A-206ENST00000540367 HSPA4P34932 840 aa13.53□□□□□ -0.24
CPT1A-206ENST00000540367 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
CPT1A-206ENST00000540367 ADCY5O95622 1261 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms