RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, human

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00943-206	ENST00000540250	ZNF385C	Q66K41	422 aa	Predicted RBP	11.77	□□□□□ -0.53
LINC00943-206	ENST00000540250	IL27	Q8NEV9	243 aa		11.77	□□□□□ -0.53
LINC00943-206	ENST00000540250	RSPH6A	Q9H0K4	717 aa		11.77	□□□□□ -0.53
LINC00943-206	ENST00000540250	FKBPL	Q9UIM3	349 aa		11.77	□□□□□ -0.53
LINC00943-206	ENST00000540250	PTPN23	Q9H3S7	1636 aa		11.77	□□□□□ -0.53
LINC00943-206	ENST00000540250	GDF11	O95390	407 aa		11.76	□□□□□ -0.53
LINC00943-206	ENST00000540250	CTSO	P43234	321 aa	Predicted RBP	11.76	□□□□□ -0.53
LINC00943-206	ENST00000540250	INTS6L	Q5JSJ4	861 aa	Known RBP	11.76	□□□□□ -0.53
LINC00943-206	ENST00000540250	ZCCHC11	Q5TAX3	1644 aa	Known RBP	11.75	□□□□□ -0.53
LINC00943-206	ENST00000540250	RELB	Q01201	579 aa		11.75	□□□□□ -0.53
LINC00943-206	ENST00000540250	VWA5B2	Q8N398	1253 aa		11.75	□□□□□ -0.53
LINC00943-206	ENST00000540250	CDV3	Q9UKY7	258 aa	Known RBP	11.75	□□□□□ -0.53
LINC00943-206	ENST00000540250	TCOF1	Q13428	1488 aa	Known RBP	11.75	□□□□□ -0.53
LINC00943-206	ENST00000540250	ITGA6	P23229	1130 aa		11.74	□□□□□ -0.53
LINC00943-206	ENST00000540250	DHX9	Q08211	1270 aa	Known RBP	11.74	□□□□□ -0.53
LINC00943-206	ENST00000540250	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.74	□□□□□ -0.53
LINC00943-206	ENST00000540250	ZBTB33	Q86T24	672 aa		11.74	□□□□□ -0.53
LINC00943-206	ENST00000540250	WHAMM	Q8TF30	809 aa		11.74	□□□□□ -0.53
LINC00943-206	ENST00000540250	INSM2	Q96T92	566 aa	Predicted RBP	11.74	□□□□□ -0.53
LINC00943-206	ENST00000540250	OCSTAMP	Q9BR26	566 aa		11.74	□□□□□ -0.53
LINC00943-206	ENST00000540250	MIA2	Q96PC5	1412 aa		11.74	□□□□□ -0.53
LINC00943-206	ENST00000540250	SVOP	Q8N4V2	548 aa		11.73	□□□□□ -0.53
LINC00943-206	ENST00000540250	KDM5B	Q9UGL1	1544 aa		11.72	□□□□□ -0.53
LINC00943-206	ENST00000540250	CDC14C	A4D256	554 aa		11.72	□□□□□ -0.53
LINC00943-206	ENST00000540250	RNF225	M0QZC1	329 aa	Predicted RBP	11.72	□□□□□ -0.53
LINC00943-206	ENST00000540250	FAM50A	Q14320	339 aa	Known RBP	11.72	□□□□□ -0.53
LINC00943-206	ENST00000540250	NR6A1	Q15406	480 aa		11.72	□□□□□ -0.53
LINC00943-206	ENST00000540250	CDC42BPA	Q5VT25	1732 aa		11.72	□□□□□ -0.53
LINC00943-206	ENST00000540250	PLEKHD1	A6NEE1	506 aa		11.71	□□□□□ -0.53
LINC00943-206	ENST00000540250	ABCC10	Q5T3U5	1492 aa		11.7	□□□□□ -0.54
LINC00943-206	ENST00000540250	SV2A	Q7L0J3	742 aa		11.7	□□□□□ -0.54
LINC00943-206	ENST00000540250	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.7	□□□□□ -0.54
LINC00943-206	ENST00000540250	POLM	Q9NP87	494 aa	Predicted RBP	11.7	□□□□□ -0.54
LINC00943-206	ENST00000540250	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.69	□□□□□ -0.54
LINC00943-206	ENST00000540250	SLURP2	P0DP57	97 aa		11.69	□□□□□ -0.54
LINC00943-206	ENST00000540250	RNF217	Q8TC41	542 aa		11.69	□□□□□ -0.54
LINC00943-206	ENST00000540250	ADAM32	Q8TC27	787 aa		11.68	□□□□□ -0.54
LINC00943-206	ENST00000540250	TMPRSS4	Q9NRS4	437 aa		11.68	□□□□□ -0.54
LINC00943-206	ENST00000540250	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.68	□□□□□ -0.54
LINC00943-206	ENST00000540250	PREX2	Q70Z35	1606 aa		11.68	□□□□□ -0.54
LINC00943-206	ENST00000540250	SENP3-EIF4A1	A0A087X0R7	540 aa		11.67	□□□□□ -0.54
LINC00943-206	ENST00000540250	ARHGEF15	O94989	841 aa		11.67	□□□□□ -0.54
LINC00943-206	ENST00000540250	ITGAE	P38570	1179 aa		11.67	□□□□□ -0.54
LINC00943-206	ENST00000540250	PTK2	Q05397	1052 aa		11.67	□□□□□ -0.54
LINC00943-206	ENST00000540250	DDRGK1	Q96HY6	314 aa		11.67	□□□□□ -0.54
LINC00943-206	ENST00000540250	ARX	Q96QS3	562 aa		11.67	□□□□□ -0.54
LINC00943-206	ENST00000540250	DNMT1	P26358	1616 aa	Known RBP	11.67	□□□□□ -0.54
LINC00943-206	ENST00000540250	TTC37	Q6PGP7	1564 aa		11.66	□□□□□ -0.54
LINC00943-206	ENST00000540250	MYO5C	Q9NQX4	1742 aa		11.66	□□□□□ -0.54
LINC00943-206	ENST00000540250	CAMSAP2	Q08AD1	1489 aa		11.65	□□□□□ -0.54
LINC00943-206	ENST00000540250	RAB15	P59190	212 aa		11.65	□□□□□ -0.54
LINC00943-206	ENST00000540250	ZNF784	Q8NCA9	323 aa	Predicted RBP	11.65	□□□□□ -0.54
LINC00943-206	ENST00000540250	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.65	□□□□□ -0.54
LINC00943-206	ENST00000540250	FAM117A	Q9C073	453 aa		11.65	□□□□□ -0.54
LINC00943-206	ENST00000540250	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	11.65	□□□□□ -0.55
LINC00943-206	ENST00000540250	CROCC2	H7BZ55	1655 aa		11.65	□□□□□ -0.55
LINC00943-206	ENST00000540250	CDC42BPB	Q9Y5S2	1711 aa		11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	IRS1	P35568	1242 aa		11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	ZEB1	P37275	1124 aa	Predicted RBP	11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	SKIV2L	Q15477	1246 aa	Known RBP	11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	CCER1	Q8TC90	406 aa	Predicted RBP	11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	EPS8L1	Q8TE68	723 aa		11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	GPSM3	Q9Y4H4	160 aa		11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	GCC2	Q8IWJ2	1684 aa		11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	RIMBP3C	A6NJZ7	1639 aa		11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	RIMBP3B	A6NNM3	1639 aa		11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	RIMBP3	Q9UFD9	1639 aa		11.64	□□□□□ -0.55
LINC00943-206	ENST00000540250	SETD5	Q9C0A6	1442 aa		11.63	□□□□□ -0.55
LINC00943-206	ENST00000540250	ADH1A	P07327	375 aa		11.63	□□□□□ -0.55
LINC00943-206	ENST00000540250	ADD1	P35611	737 aa	Known RBP	11.63	□□□□□ -0.55
LINC00943-206	ENST00000540250	PTPRK	Q15262	1439 aa		11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	LILRA1	O75019	489 aa		11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	AP1G2	O75843	785 aa		11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	NBPF20	Q3BBV1	942 aa		11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	PPP2R2D	Q66LE6	453 aa		11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	KDF1	Q8NAX2	398 aa	Predicted RBP	11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	WDR7	Q9Y4E6	1490 aa		11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	ADGB	Q8N7X0	1667 aa		11.62	□□□□□ -0.55
LINC00943-206	ENST00000540250	DAPK1	P53355	1430 aa		11.61	□□□□□ -0.55
LINC00943-206	ENST00000540250	AKNA	Q7Z591	1439 aa		11.61	□□□□□ -0.55
LINC00943-206	ENST00000540250	ERVH48-1	M5A8F1	160 aa		11.61	□□□□□ -0.55
LINC00943-206	ENST00000540250	ADAMTS2	O95450	1211 aa		11.61	□□□□□ -0.55
LINC00943-206	ENST00000540250	SH3D19	Q5HYK7	790 aa		11.61	□□□□□ -0.55
LINC00943-206	ENST00000540250	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.61	□□□□□ -0.55
LINC00943-206	ENST00000540250	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.61	□□□□□ -0.55
LINC00943-206	ENST00000540250	RAB3GAP2	Q9H2M9	1393 aa		11.61	□□□□□ -0.55
LINC00943-206	ENST00000540250	HFM1	A2PYH4	1435 aa		11.6	□□□□□ -0.55
LINC00943-206	ENST00000540250	SAMD9L	Q8IVG5	1584 aa		11.6	□□□□□ -0.55
LINC00943-206	ENST00000540250	PTGIR	P43119	386 aa		11.6	□□□□□ -0.55
LINC00943-206	ENST00000540250	MARS	P56192	900 aa	Known RBP	11.6	□□□□□ -0.55
LINC00943-206	ENST00000540250	LYPD4	Q6UWN0	246 aa		11.6	□□□□□ -0.55
LINC00943-206	ENST00000540250	GPAT2	Q6NUI2	795 aa		11.59	□□□□□ -0.55
LINC00943-206	ENST00000540250	HMX1	Q9NP08	348 aa	Predicted RBP	11.59	□□□□□ -0.55
LINC00943-206	ENST00000540250	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.59	□□□□□ -0.55
LINC00943-206	ENST00000540250	ABCA9	Q8IUA7	1624 aa		11.59	□□□□□ -0.55
LINC00943-206	ENST00000540250	ARHGAP5	Q13017	1502 aa		11.59	□□□□□ -0.55
LINC00943-206	ENST00000540250	ABCC5	O15440	1437 aa		11.59	□□□□□ -0.55
LINC00943-206	ENST00000540250	ARHGEF5	Q12774	1597 aa		11.58	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms