RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 LRRC37A3O60309 1634 aa13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 LRP6O75581 1613 aa13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 PDE3AQ14432 1141 aa13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 ATF7IPQ6VMQ6 1270 aa13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 FTSJ3Q8IY81 847 aaKnown RBP13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 ZNF428Q96B54 188 aa13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
PABPC1P4-201ENST00000539977 SLIT2O94813 1529 aa13.24□□□□□ -0.29
PABPC1P4-201ENST00000539977 PRAMEF22A3QJZ6 481 aa13.24□□□□□ -0.29
PABPC1P4-201ENST00000539977 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
PABPC1P4-201ENST00000539977 HSP90AB1P08238 724 aaKnown RBP13.24□□□□□ -0.29
PABPC1P4-201ENST00000539977 EIF2S2P20042 333 aaKnown RBP13.24□□□□□ -0.29
PABPC1P4-201ENST00000539977 CCDC136Q96JN2 1154 aa13.24□□□□□ -0.29
PABPC1P4-201ENST00000539977 SPATA31A5Q5VU36 1347 aa13.24□□□□□ -0.29
PABPC1P4-201ENST00000539977 SPATA31A7Q8IWB4 1347 aa13.24□□□□□ -0.29
PABPC1P4-201ENST00000539977 EXOC5O00471 708 aa13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 DZIP1LQ8IYY4 767 aaKnown RBP13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 KIF16BQ96L93 1317 aa13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 DISP2A7MBM2 1401 aa13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 FAM98CQ17RN3 349 aaKnown RBP13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 ZNF790Q6PG37 636 aa13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 G2E3Q7L622 706 aa13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 USP21Q9UK80 565 aa13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 BCL9LQ86UU0 1499 aa13.23□□□□□ -0.29
PABPC1P4-201ENST00000539977 IPO8O15397 1037 aaKnown RBP13.22□□□□□ -0.29
PABPC1P4-201ENST00000539977 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
PABPC1P4-201ENST00000539977 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.29
PABPC1P4-201ENST00000539977 NKX1-1Q15270 411 aaPredicted RBP13.21□□□□□ -0.29
PABPC1P4-201ENST00000539977 HDGFL1Q5TGJ6 251 aa13.21□□□□□ -0.29
PABPC1P4-201ENST00000539977 ITPRIPQ8IWB1 547 aa13.21□□□□□ -0.29
PABPC1P4-201ENST00000539977 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
PABPC1P4-201ENST00000539977 PLEKHG2Q9H7P9 1386 aa13.21□□□□□ -0.29
PABPC1P4-201ENST00000539977 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.3
PABPC1P4-201ENST00000539977 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.3
PABPC1P4-201ENST00000539977 A0A0G2JS52 829 aa13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 GIGYF1O75420 1035 aaPredicted RBP13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 ANXA1P04083 346 aa13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 MYT1Q01538 1121 aa13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 DDB1Q16531 1140 aa13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 CCDC30Q5VVM6 783 aa13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 STK31Q9BXU1 1019 aa13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 THRAP3Q9Y2W1 955 aaKnown RBP13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 PKD1L3Q7Z443 1732 aa13.2□□□□□ -0.3
PABPC1P4-201ENST00000539977 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
PABPC1P4-201ENST00000539977 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
PABPC1P4-201ENST00000539977 VPS72Q15906 364 aa13.19□□□□□ -0.3
PABPC1P4-201ENST00000539977 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
PABPC1P4-201ENST00000539977 AFF2P51816 1311 aa13.19□□□□□ -0.3
PABPC1P4-201ENST00000539977 PARP4Q9UKK3 1724 aaKnown RBP13.19□□□□□ -0.3
PABPC1P4-201ENST00000539977 SYTL4Q96C24 671 aaPredicted RBP13.19□□□□□ -0.3
PABPC1P4-201ENST00000539977 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
PABPC1P4-201ENST00000539977 F6X3S4 739 aa13.18□□□□□ -0.3
PABPC1P4-201ENST00000539977 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
PABPC1P4-201ENST00000539977 ARHGAP45Q92619 1136 aa13.18□□□□□ -0.3
PABPC1P4-201ENST00000539977 PHAXQ9H814 394 aaKnown RBP13.18□□□□□ -0.3
PABPC1P4-201ENST00000539977 NRAPQ86VF7 1730 aa13.17□□□□□ -0.3
PABPC1P4-201ENST00000539977 BARGINQ6ZT62 677 aa13.17□□□□□ -0.3
PABPC1P4-201ENST00000539977 MARCH10Q8NA82 808 aaPredicted RBP13.17□□□□□ -0.3
PABPC1P4-201ENST00000539977 PIGBQ92521 554 aa13.17□□□□□ -0.3
PABPC1P4-201ENST00000539977 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
PABPC1P4-201ENST00000539977 TMOD3Q9NYL9 352 aa13.17□□□□□ -0.3
PABPC1P4-201ENST00000539977 ADAMTS7Q9UKP4 1686 aa13.17□□□□□ -0.3
PABPC1P4-201ENST00000539977 HEG1Q9ULI3 1381 aa13.17□□□□□ -0.3
PABPC1P4-201ENST00000539977 MS4A1P11836 297 aa13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 ACSBG1Q96GR2 724 aa13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 PIP4K2AP48426 406 aaPredicted RBP13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 PRIM1P49642 420 aaKnown RBP13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 FLIIQ13045 1269 aa13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 API5Q9BZZ5 524 aaKnown RBP13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 ASAP1Q9ULH1 1129 aa13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 USP16Q9Y5T5 823 aa13.16□□□□□ -0.3
PABPC1P4-201ENST00000539977 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
PABPC1P4-201ENST00000539977 HOXB7P09629 217 aa13.15□□□□□ -0.3
PABPC1P4-201ENST00000539977 FKBP5Q13451 457 aaPredicted RBP13.15□□□□□ -0.3
PABPC1P4-201ENST00000539977 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.3
PABPC1P4-201ENST00000539977 FMNL2Q96PY5 1086 aa13.15□□□□□ -0.3
PABPC1P4-201ENST00000539977 MRC1P22897 1456 aa13.15□□□□□ -0.3
PABPC1P4-201ENST00000539977 ABCC4O15439 1325 aa13.15□□□□□ -0.31
PABPC1P4-201ENST00000539977 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.31
PABPC1P4-201ENST00000539977 FAM182BQ5T319 152 aa13.14□□□□□ -0.31
PABPC1P4-201ENST00000539977 KDM3BQ7LBC6 1761 aa13.14□□□□□ -0.31
PABPC1P4-201ENST00000539977 SCN11AQ9UI33 1791 aa13.14□□□□□ -0.31
PABPC1P4-201ENST00000539977 SHANK3Q9BYB0 1731 aa13.14□□□□□ -0.31
PABPC1P4-201ENST00000539977 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
PABPC1P4-201ENST00000539977 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
PABPC1P4-201ENST00000539977 RGS12O14924 1447 aa13.14□□□□□ -0.31
PABPC1P4-201ENST00000539977 PTPRCP08575 1304 aa13.13□□□□□ -0.31
PABPC1P4-201ENST00000539977 MYL6BP14649 208 aa13.13□□□□□ -0.31
PABPC1P4-201ENST00000539977 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
PABPC1P4-201ENST00000539977 DDX19BQ9UMR2 479 aa13.13□□□□□ -0.31
PABPC1P4-201ENST00000539977 NWD2Q9ULI1 1742 aa13.13□□□□□ -0.31
PABPC1P4-201ENST00000539977 SKAP1Q86WV1 359 aa13.12□□□□□ -0.31
PABPC1P4-201ENST00000539977 C1orf115Q9H7X2 142 aa13.12□□□□□ -0.31
PABPC1P4-201ENST00000539977 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
PABPC1P4-201ENST00000539977 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
PABPC1P4-201ENST00000539977 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
PABPC1P4-201ENST00000539977 KCNQ2O43526 872 aa13.12□□□□□ -0.31
PABPC1P4-201ENST00000539977 IGHDP01880 384 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms