RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 CDK19Q9BWU1 502 aa9.96□□□□□ -0.82
CCDC60-204ENST00000539847 TMEM121BQ9BXQ6 578 aaPredicted RBP9.96□□□□□ -0.82
CCDC60-204ENST00000539847 STRN4Q9NRL3 753 aa9.96□□□□□ -0.82
CCDC60-204ENST00000539847 ACEP12821 1306 aa9.96□□□□□ -0.82
CCDC60-204ENST00000539847 NINLQ9Y2I6 1382 aa9.96□□□□□ -0.82
CCDC60-204ENST00000539847 CHRNA2Q15822 529 aa9.95□□□□□ -0.82
CCDC60-204ENST00000539847 NLRP13Q86W25 1043 aa9.95□□□□□ -0.82
CCDC60-204ENST00000539847 OCEL1Q9H607 264 aa9.95□□□□□ -0.82
CCDC60-204ENST00000539847 SPON1Q9HCB6 807 aa9.95□□□□□ -0.82
CCDC60-204ENST00000539847 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
CCDC60-204ENST00000539847 BCL9O00512 1426 aa9.95□□□□□ -0.82
CCDC60-204ENST00000539847 PHRF1Q9P1Y6 1649 aaKnown RBP9.95□□□□□ -0.82
CCDC60-204ENST00000539847 ARHGEF28Q8N1W1 1705 aaKnown RBP9.94□□□□□ -0.82
CCDC60-204ENST00000539847 RREB1Q92766 1687 aa9.94□□□□□ -0.82
CCDC60-204ENST00000539847 CAMTA1Q9Y6Y1 1673 aa9.94□□□□□ -0.82
CCDC60-204ENST00000539847 PLSCR1O15162 318 aa9.94□□□□□ -0.82
CCDC60-204ENST00000539847 GCP02774 474 aa9.94□□□□□ -0.82
CCDC60-204ENST00000539847 ZC3H6P61129 1189 aaKnown RBP9.94□□□□□ -0.82
CCDC60-204ENST00000539847 LARP1Q6PKG0 1096 aaKnown RBP9.94□□□□□ -0.82
CCDC60-204ENST00000539847 ABTB2Q8N961 1025 aa9.94□□□□□ -0.82
CCDC60-204ENST00000539847 TOPAZ1Q8N9V7 1692 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 LMO7Q8WWI1 1683 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 NRKQ7Z2Y5 1582 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 OVOS2A0A0G2JMS6 1433 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 OVOS2A0A0J9YW53 1432 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 OVOS2Q6IE36 1432 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 AATKQ6ZMQ8 1374 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 KIF3CO14782 793 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 TRIM66O15016 1216 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 KCNQ2O43526 872 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 NEFMP07197 916 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 PDE4DQ08499 809 aa9.93□□□□□ -0.82
CCDC60-204ENST00000539847 CDCA7Q9BWT1 371 aaPredicted RBP9.93□□□□□ -0.82
CCDC60-204ENST00000539847 COL5A2P05997 1499 aaPredicted RBP9.92□□□□□ -0.82
CCDC60-204ENST00000539847 CRB1P82279 1406 aa9.92□□□□□ -0.82
CCDC60-204ENST00000539847 YY1P25490 414 aa9.92□□□□□ -0.82
CCDC60-204ENST00000539847 ASTLQ6HA08 431 aaPredicted RBP9.92□□□□□ -0.82
CCDC60-204ENST00000539847 RGPD3A6NKT7 1758 aaPredicted RBP9.92□□□□□ -0.82
CCDC60-204ENST00000539847 RGPD4Q7Z3J3 1758 aa9.92□□□□□ -0.82
CCDC60-204ENST00000539847 KIAA1210Q9ULL0 1709 aa9.92□□□□□ -0.82
CCDC60-204ENST00000539847 PARP4Q9UKK3 1724 aaKnown RBP9.91□□□□□ -0.82
CCDC60-204ENST00000539847 EXOC6Q8TAG9 804 aa9.91□□□□□ -0.82
CCDC60-204ENST00000539847 NUP188Q5SRE5 1749 aa9.9□□□□□ -0.82
CCDC60-204ENST00000539847 CLCN6P51797 869 aa9.9□□□□□ -0.82
CCDC60-204ENST00000539847 IER5LQ5T953 404 aa9.9□□□□□ -0.82
CCDC60-204ENST00000539847 NUTM2GQ5VZR2 741 aa9.9□□□□□ -0.82
CCDC60-204ENST00000539847 PPP1R1BQ9UD71 204 aaPredicted RBP9.9□□□□□ -0.82
CCDC60-204ENST00000539847 PPIP5K1Q6PFW1 1433 aa9.9□□□□□ -0.83
CCDC60-204ENST00000539847 CENPJQ9HC77 1338 aaPredicted RBP9.89□□□□□ -0.83
CCDC60-204ENST00000539847 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
CCDC60-204ENST00000539847 MAP3K9P80192 1104 aa9.89□□□□□ -0.83
CCDC60-204ENST00000539847 USP6P35125 1406 aa9.89□□□□□ -0.83
CCDC60-204ENST00000539847 SLIT3O75094 1523 aa9.88□□□□□ -0.83
CCDC60-204ENST00000539847 PEAK1Q9H792 1746 aa9.88□□□□□ -0.83
CCDC60-204ENST00000539847 G3V3G9 751 aa9.88□□□□□ -0.83
CCDC60-204ENST00000539847 GPR37O15354 613 aa9.88□□□□□ -0.83
CCDC60-204ENST00000539847 SRPK2P78362 688 aaKnown RBP9.88□□□□□ -0.83
CCDC60-204ENST00000539847 DDB1Q16531 1140 aa9.88□□□□□ -0.83
CCDC60-204ENST00000539847 TMEM92Q6UXU6 159 aa9.88□□□□□ -0.83
CCDC60-204ENST00000539847 CENPQQ7L2Z9 268 aaPredicted RBP9.88□□□□□ -0.83
CCDC60-204ENST00000539847 CARD11Q9BXL7 1154 aa9.88□□□□□ -0.83
CCDC60-204ENST00000539847 WDR17Q8IZU2 1322 aa9.87□□□□□ -0.83
CCDC60-204ENST00000539847 PER1O15534 1290 aaPredicted RBP9.87□□□□□ -0.83
CCDC60-204ENST00000539847 PLCG2P16885 1265 aa9.87□□□□□ -0.83
CCDC60-204ENST00000539847 NGEFQ8N5V2 710 aa9.87□□□□□ -0.83
CCDC60-204ENST00000539847 KCNH5Q8NCM2 988 aa9.87□□□□□ -0.83
CCDC60-204ENST00000539847 ANO8Q9HCE9 1232 aaPredicted RBP9.87□□□□□ -0.83
CCDC60-204ENST00000539847 ABCC6O95255 1503 aa9.87□□□□□ -0.83
CCDC60-204ENST00000539847 KDM2BQ8NHM5 1336 aa9.85□□□□□ -0.83
CCDC60-204ENST00000539847 NFKBIBQ15653 356 aa9.85□□□□□ -0.83
CCDC60-204ENST00000539847 TOM1L2Q6ZVM7 507 aa9.85□□□□□ -0.83
CCDC60-204ENST00000539847 ARHGEF25Q86VW2 580 aa9.85□□□□□ -0.83
CCDC60-204ENST00000539847 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.85□□□□□ -0.83
CCDC60-204ENST00000539847 CARD10Q9BWT7 1032 aa9.85□□□□□ -0.83
CCDC60-204ENST00000539847 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
CCDC60-204ENST00000539847 TTC21AQ8NDW8 1320 aa9.84□□□□□ -0.83
CCDC60-204ENST00000539847 CPSF1Q10570 1443 aaKnown RBP9.84□□□□□ -0.83
CCDC60-204ENST00000539847 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
CCDC60-204ENST00000539847 NBPF1Q3BBV0 1214 aa9.84□□□□□ -0.83
CCDC60-204ENST00000539847 UBE2Q2Q8WVN8 375 aa9.84□□□□□ -0.83
CCDC60-204ENST00000539847 ARID3AQ99856 593 aa9.84□□□□□ -0.83
CCDC60-204ENST00000539847 COLQQ9Y215 455 aaPredicted RBP9.84□□□□□ -0.83
CCDC60-204ENST00000539847 SALL2Q9Y467 1007 aaPredicted RBP9.84□□□□□ -0.83
CCDC60-204ENST00000539847 LRRC37A3O60309 1634 aa9.84□□□□□ -0.83
CCDC60-204ENST00000539847 EVC2Q86UK5 1308 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 ST20-MTHFSA0A0A6YYL1 179 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 OSBPP22059 807 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 PTGER2P43116 358 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 AAMPQ13685 434 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 FAM43AQ8N2R8 423 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 MARCH10Q8NA82 808 aaPredicted RBP9.83□□□□□ -0.84
CCDC60-204ENST00000539847 L3MBTL3Q96JM7 780 aaPredicted RBP9.83□□□□□ -0.84
CCDC60-204ENST00000539847 FAM117AQ9C073 453 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 C1orf115Q9H7X2 142 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 MAP3K5Q99683 1374 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 CASZ1Q86V15 1759 aa9.83□□□□□ -0.84
CCDC60-204ENST00000539847 MTFR1LQ9H019 292 aa9.82□□□□□ -0.84
CCDC60-204ENST00000539847 STK32BQ9NY57 414 aa9.82□□□□□ -0.84
CCDC60-204ENST00000539847 AXIN2Q9Y2T1 843 aa9.82□□□□□ -0.84
CCDC60-204ENST00000539847 COL18A1P39060 1754 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms