RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 FBLN1P23142 703 aa10.1□□□□□ -0.79
GNE-205ENST00000539815 NRXN3Q9Y4C0 1643 aa10.1□□□□□ -0.79
GNE-205ENST00000539815 COL22A1Q8NFW1 1626 aaPredicted RBP10.1□□□□□ -0.79
GNE-205ENST00000539815 SOGA3Q5TF21 947 aa10.1□□□□□ -0.79
GNE-205ENST00000539815 YTHDC1Q96MU7 727 aaKnown RBP10.1□□□□□ -0.79
GNE-205ENST00000539815 NEFLP07196 543 aa10.09□□□□□ -0.79
GNE-205ENST00000539815 HSPA1AP0DMV8 641 aaKnown RBP10.09□□□□□ -0.79
GNE-205ENST00000539815 HSPA1BP0DMV9 641 aaKnown RBP10.09□□□□□ -0.79
GNE-205ENST00000539815 EIF6P56537 245 aaKnown RBP10.09□□□□□ -0.79
GNE-205ENST00000539815 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
GNE-205ENST00000539815 NWD2Q9ULI1 1742 aa10.09□□□□□ -0.79
GNE-205ENST00000539815 LMNB1P20700 586 aa10.09□□□□□ -0.79
GNE-205ENST00000539815 DCAF5Q96JK2 942 aa10.09□□□□□ -0.79
GNE-205ENST00000539815 GJA3Q9Y6H8 435 aa10.09□□□□□ -0.79
GNE-205ENST00000539815 CNKSR1Q969H4 720 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 ASAP1Q9ULH1 1129 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 FLT4P35916 1363 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 PDE6BP35913 854 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 KLRG1Q96E93 195 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 RPS6KA4O75676 772 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 PIGBQ92521 554 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 ZNF408Q9H9D4 720 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 PDZRN3Q9UPQ7 1066 aa10.08□□□□□ -0.8
GNE-205ENST00000539815 FMN2Q9NZ56 1722 aa10.07□□□□□ -0.8
GNE-205ENST00000539815 LRP5O75197 1615 aa10.07□□□□□ -0.8
GNE-205ENST00000539815 EMILIN1Q9Y6C2 1016 aa10.07□□□□□ -0.8
GNE-205ENST00000539815 ECE1P42892 770 aa10.07□□□□□ -0.8
GNE-205ENST00000539815 EDC4Q6P2E9 1401 aaKnown RBP10.07□□□□□ -0.8
GNE-205ENST00000539815 PLEKHG2Q9H7P9 1386 aa10.07□□□□□ -0.8
GNE-205ENST00000539815 TCERG1O14776 1098 aaKnown RBP10.06□□□□□ -0.8
GNE-205ENST00000539815 CTCFP49711 727 aaPredicted RBP10.06□□□□□ -0.8
GNE-205ENST00000539815 NBPF5PQ86XG9 351 aaPredicted RBP10.06□□□□□ -0.8
GNE-205ENST00000539815 TAOK3Q9H2K8 898 aa10.06□□□□□ -0.8
GNE-205ENST00000539815 LAMC1P11047 1609 aa10.06□□□□□ -0.8
GNE-205ENST00000539815 NGEFQ8N5V2 710 aa10.06□□□□□ -0.8
GNE-205ENST00000539815 BCL2L13Q9BXK5 485 aa10.06□□□□□ -0.8
GNE-205ENST00000539815 TEX13AQ9BXU3 409 aaPredicted RBP10.06□□□□□ -0.8
GNE-205ENST00000539815 SULT6B1Q6IMI4 303 aa10.05□□□□□ -0.8
GNE-205ENST00000539815 HTRA3P83110 453 aa10.05□□□□□ -0.8
GNE-205ENST00000539815 SMIM5Q71RC9 77 aa10.05□□□□□ -0.8
GNE-205ENST00000539815 ARHGEF1Q92888 912 aaKnown RBP10.05□□□□□ -0.8
GNE-205ENST00000539815 MAP3K5Q99683 1374 aa10.05□□□□□ -0.8
GNE-205ENST00000539815 CNBD1Q8NA66 436 aa10.05□□□□□ -0.8
GNE-205ENST00000539815 NRKQ7Z2Y5 1582 aa10.05□□□□□ -0.8
GNE-205ENST00000539815 ERVV-2B6SEH9 535 aa10.04□□□□□ -0.8
GNE-205ENST00000539815 CHRNA5P30532 468 aa10.04□□□□□ -0.8
GNE-205ENST00000539815 DEKP35659 375 aaKnown RBP10.04□□□□□ -0.8
GNE-205ENST00000539815 SERPINB2P05120 415 aa10.04□□□□□ -0.8
GNE-205ENST00000539815 RPGRQ92834 1020 aaKnown RBP10.04□□□□□ -0.8
GNE-205ENST00000539815 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.04□□□□□ -0.8
GNE-205ENST00000539815 FGD1P98174 961 aa10.03□□□□□ -0.8
GNE-205ENST00000539815 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
GNE-205ENST00000539815 USPL1Q5W0Q7 1092 aa10.03□□□□□ -0.8
GNE-205ENST00000539815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.03□□□□□ -0.81e-6■■■■□ 22.3
GNE-205ENST00000539815 PPLO60437 1756 aa10.02□□□□□ -0.8
GNE-205ENST00000539815 FYB1O15117 783 aa10.02□□□□□ -0.8
GNE-205ENST00000539815 NFATC2IPQ8NCF5 419 aa10.02□□□□□ -0.8
GNE-205ENST00000539815 PLCH1Q4KWH8 1693 aa10.02□□□□□ -0.81
GNE-205ENST00000539815 BRWD3Q6RI45 1802 aa10.02□□□□□ -0.81
GNE-205ENST00000539815 CHADLQ6NUI6 762 aa10.02□□□□□ -0.81
GNE-205ENST00000539815 SRP68Q9UHB9 627 aaKnown RBP10.02□□□□□ -0.81
GNE-205ENST00000539815 C21orf2O43822 256 aa10.02□□□□□ -0.81
GNE-205ENST00000539815 CRKLP46109 303 aaKnown RBP10.02□□□□□ -0.81
GNE-205ENST00000539815 TPTE2Q6XPS3 522 aa10.02□□□□□ -0.81
GNE-205ENST00000539815 KIF3CO14782 793 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 CYP27B1O15528 508 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 MAP2K1Q02750 393 aaPredicted RBP10.01□□□□□ -0.81
GNE-205ENST00000539815 LARGE2Q8N3Y3 721 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 EYA1Q99502 592 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 SGIP1Q9BQI5 828 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 HDAC9Q9UKV0 1011 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 PHKG2P15735 406 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 PRELPP51888 382 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 TTLL12Q14166 644 aaPredicted RBP10.01□□□□□ -0.81
GNE-205ENST00000539815 ERICH6BQ5W0A0 696 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 DNAJC10Q8IXB1 793 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 A0A1W2PP64 1363 aa10.01□□□□□ -0.81
GNE-205ENST00000539815 DEFB115Q30KQ5 88 aa10□□□□□ -0.81
GNE-205ENST00000539815 RC3H1Q5TC82 1133 aaKnown RBP10□□□□□ -0.81
GNE-205ENST00000539815 TAOK2Q9UL54 1235 aa10□□□□□ -0.81
GNE-205ENST00000539815 GLTPD2A6NH11 291 aa10□□□□□ -0.81
GNE-205ENST00000539815 HMOX1P09601 288 aa10□□□□□ -0.81
GNE-205ENST00000539815 CCDC93Q567U6 631 aa10□□□□□ -0.81
GNE-205ENST00000539815 LINC00116Q8NCU8 138 aa10□□□□□ -0.81
GNE-205ENST00000539815 TBC1D2BQ9UPU7 963 aa10□□□□□ -0.81
GNE-205ENST00000539815 KIF6Q6ZMV9 814 aa10□□□□□ -0.81
GNE-205ENST00000539815 GAS2L2Q8NHY3 880 aa10□□□□□ -0.81
GNE-205ENST00000539815 PNMA8AQ86V59 439 aaPredicted RBP9.99□□□□□ -0.81
GNE-205ENST00000539815 USP31Q70CQ4 1352 aa9.99□□□□□ -0.81
GNE-205ENST00000539815 HACL1Q9UJ83 578 aa9.99□□□□□ -0.81
GNE-205ENST00000539815 WDHD1O75717 1129 aaPredicted RBP9.98□□□□□ -0.81
GNE-205ENST00000539815 COL13A1Q5TAT6 717 aaPredicted RBP9.98□□□□□ -0.81
GNE-205ENST00000539815 RTL1A6NKG5 1358 aa9.98□□□□□ -0.81
GNE-205ENST00000539815 INSRP06213 1382 aa9.98□□□□□ -0.81
GNE-205ENST00000539815 DIAPH1O60610 1272 aaKnown RBP9.98□□□□□ -0.81
GNE-205ENST00000539815 RASSF7Q02833 373 aa9.98□□□□□ -0.81
GNE-205ENST00000539815 MLLT1Q03111 559 aaPredicted RBP9.98□□□□□ -0.81
GNE-205ENST00000539815 CCDC24Q8N4L8 307 aa9.98□□□□□ -0.81
GNE-205ENST00000539815 MAPK8IP3Q9UPT6 1336 aa9.98□□□□□ -0.81
GNE-205ENST00000539815 NIM1KQ8IY84 436 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms