RNA–Protein interactions for RNA: ENST00000539735.5

COPS7A-210, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COPS7A, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-210ENST00000539735 MVPQ14764 893 aaKnown RBP23.22■■□□□ 1.31
COPS7A-210ENST00000539735 IGSF1Q8N6C5 1336 aa23.21■■□□□ 1.31
COPS7A-210ENST00000539735 FAM208AQ9UK61 1670 aaKnown RBP23.21■■□□□ 1.31
COPS7A-210ENST00000539735 TATP17735 454 aaPredicted RBP23.21■■□□□ 1.31
COPS7A-210ENST00000539735 VIRMAQ69YN4 1812 aaKnown RBP23.2■■□□□ 1.3
COPS7A-210ENST00000539735 GNAI1P63096 354 aa23.19■■□□□ 1.3
COPS7A-210ENST00000539735 IFT57Q9NWB7 429 aa23.19■■□□□ 1.3
COPS7A-210ENST00000539735 DCTN1Q14203 1278 aa23.19■■□□□ 1.3
COPS7A-210ENST00000539735 DZIP1LQ8IYY4 767 aaKnown RBP23.19■■□□□ 1.3
COPS7A-210ENST00000539735 SMC4Q9NTJ3 1288 aa23.19■■□□□ 1.3
COPS7A-210ENST00000539735 TNNQ9UQP3 1299 aa23.19■■□□□ 1.3
COPS7A-210ENST00000539735 MEGF6O75095 1541 aa23.18■■□□□ 1.3
COPS7A-210ENST00000539735 FTSJ3Q8IY81 847 aaKnown RBP23.17■■□□□ 1.3
COPS7A-210ENST00000539735 ZCRB1Q8TBF4 217 aaKnown RBP23.17■■□□□ 1.3
COPS7A-210ENST00000539735 DDX54Q8TDD1 881 aaKnown RBP23.17■■□□□ 1.3
COPS7A-210ENST00000539735 PCDHB15Q9Y5E8 787 aa23.17■■□□□ 1.3
COPS7A-210ENST00000539735 RGPD2P0DJD1 1756 aa23.17■■□□□ 1.3
COPS7A-210ENST00000539735 ZNF853P0CG23 659 aa23.17■■□□□ 1.3
COPS7A-210ENST00000539735 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
COPS7A-210ENST00000539735 RWDD1Q9H446 243 aaPredicted RBP23.17■■□□□ 1.3
COPS7A-210ENST00000539735 KDRP35968 1356 aa23.16■■□□□ 1.3
COPS7A-210ENST00000539735 MARCH10Q8NA82 808 aaPredicted RBP23.16■■□□□ 1.3
COPS7A-210ENST00000539735 NBR1Q14596 966 aa23.15■■□□□ 1.3
COPS7A-210ENST00000539735 MBIPQ9NS73 344 aa23.15■■□□□ 1.3
COPS7A-210ENST00000539735 NCAPD2Q15021 1401 aa23.15■■□□□ 1.3
COPS7A-210ENST00000539735 TNS2Q63HR2 1409 aa23.15■■□□□ 1.3
COPS7A-210ENST00000539735 ZNF428Q96B54 188 aa23.15■■□□□ 1.3
COPS7A-210ENST00000539735 CFAP44Q96MT7 982 aa23.15■■□□□ 1.3
COPS7A-210ENST00000539735 OVOS2A0A0G2JMS6 1433 aa23.14■■□□□ 1.3
COPS7A-210ENST00000539735 KIF16BQ96L93 1317 aa23.14■■□□□ 1.29
COPS7A-210ENST00000539735 FAM196AQ6ZSG2 479 aa23.14■■□□□ 1.29
COPS7A-210ENST00000539735 SOCS7O14512 581 aa23.13■■□□□ 1.29
COPS7A-210ENST00000539735 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
COPS7A-210ENST00000539735 ATF7IPQ6VMQ6 1270 aa23.13■■□□□ 1.29
COPS7A-210ENST00000539735 BRWD3Q6RI45 1802 aa23.13■■□□□ 1.29
COPS7A-210ENST00000539735 PARP4Q9UKK3 1724 aaKnown RBP23.13■■□□□ 1.29
COPS7A-210ENST00000539735 MCM10Q7L590 875 aa23.12■■□□□ 1.29
COPS7A-210ENST00000539735 LRRC37A3O60309 1634 aa23.12■■□□□ 1.29
COPS7A-210ENST00000539735 TRIM27P14373 513 aa23.12■■□□□ 1.29
COPS7A-210ENST00000539735 MTHFSDQ2M296 383 aaKnown RBP23.12■■□□□ 1.29
COPS7A-210ENST00000539735 RTL5Q5HYW3 569 aaPredicted RBP23.12■■□□□ 1.29
COPS7A-210ENST00000539735 DDX19BQ9UMR2 479 aa23.12■■□□□ 1.29
COPS7A-210ENST00000539735 SPG7Q9UQ90 795 aa23.12■■□□□ 1.29
COPS7A-210ENST00000539735 IPO8O15397 1037 aaKnown RBP23.1■■□□□ 1.29
COPS7A-210ENST00000539735 BRPF1P55201 1214 aaPredicted RBP23.1■■□□□ 1.29
COPS7A-210ENST00000539735 UPF1Q92900 1129 aaKnown RBP eCLIP23.1■■□□□ 1.29
COPS7A-210ENST00000539735 TSPYL6Q8N831 410 aa23.09■■□□□ 1.29
COPS7A-210ENST00000539735 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.09■■□□□ 1.29
COPS7A-210ENST00000539735 NOB1Q9ULX3 412 aaKnown RBP23.09■■□□□ 1.29
COPS7A-210ENST00000539735 WNK3Q9BYP7 1800 aa23.09■■□□□ 1.29
COPS7A-210ENST00000539735 PCDH11XQ9BZA7 1347 aa23.09■■□□□ 1.29
COPS7A-210ENST00000539735 PCDH11YQ9BZA8 1340 aa23.09■■□□□ 1.29
COPS7A-210ENST00000539735 VAMP4O75379 141 aa23.08■■□□□ 1.29
COPS7A-210ENST00000539735 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.28
COPS7A-210ENST00000539735 PLEKHO1Q53GL0 409 aaPredicted RBP23.08■■□□□ 1.28
COPS7A-210ENST00000539735 GAS2L2Q8NHY3 880 aa23.08■■□□□ 1.28
COPS7A-210ENST00000539735 TRIM37O94972 964 aa23.07■■□□□ 1.28
COPS7A-210ENST00000539735 HDAC1Q13547 482 aaPredicted RBP23.07■■□□□ 1.28
COPS7A-210ENST00000539735 PDZRN3Q9UPQ7 1066 aa23.07■■□□□ 1.28
COPS7A-210ENST00000539735 CYP27B1O15528 508 aa23.06■■□□□ 1.28
COPS7A-210ENST00000539735 AMOTQ4VCS5 1084 aa23.06■■□□□ 1.28
COPS7A-210ENST00000539735 RTF1Q92541 710 aaKnown RBP23.06■■□□□ 1.28
COPS7A-210ENST00000539735 TWISTNBQ3B726 338 aaPredicted RBP23.05■■□□□ 1.28
COPS7A-210ENST00000539735 C8orf58Q8NAV2 365 aa23.05■■□□□ 1.28
COPS7A-210ENST00000539735 DAXXQ9UER7 740 aaPredicted RBP23.05■■□□□ 1.28
COPS7A-210ENST00000539735 SF3B2Q13435 895 aaKnown RBP23.04■■□□□ 1.28
COPS7A-210ENST00000539735 ITPRIPQ8IWB1 547 aa23.04■■□□□ 1.28
COPS7A-210ENST00000539735 CHL1O00533 1208 aa23.03■■□□□ 1.28
COPS7A-210ENST00000539735 ACSBG1Q96GR2 724 aa23.03■■□□□ 1.28
COPS7A-210ENST00000539735 ZNF530Q6P9A1 599 aaPredicted RBP23.03■■□□□ 1.28
COPS7A-210ENST00000539735 CCDC125Q86Z20 511 aa23.03■■□□□ 1.28
COPS7A-210ENST00000539735 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
COPS7A-210ENST00000539735 PLEKHG2Q9H7P9 1386 aa23.02■■□□□ 1.28
COPS7A-210ENST00000539735 PHKG2P15735 406 aa23.01■■□□□ 1.27
COPS7A-210ENST00000539735 MRPL50Q8N5N7 158 aaKnown RBP23.01■■□□□ 1.27
COPS7A-210ENST00000539735 DEKP35659 375 aaKnown RBP23.01■■□□□ 1.27
COPS7A-210ENST00000539735 C1orf141Q5JVX7 400 aa23.01■■□□□ 1.27
COPS7A-210ENST00000539735 TMEM57Q8N5G2 664 aa23.01■■□□□ 1.27
COPS7A-210ENST00000539735 KCNQ2O43526 872 aa23■■□□□ 1.27
COPS7A-210ENST00000539735 ARHGAP45Q92619 1136 aa23■■□□□ 1.27
COPS7A-210ENST00000539735 SYTL4Q96C24 671 aaPredicted RBP23■■□□□ 1.27
COPS7A-210ENST00000539735 BCL9O00512 1426 aa23■■□□□ 1.27
COPS7A-210ENST00000539735 GNAT3A8MTJ3 354 aa22.99■■□□□ 1.27
COPS7A-210ENST00000539735 ZBTB40Q9NUA8 1239 aa22.99■■□□□ 1.27
COPS7A-210ENST00000539735 HTATSF1O43719 755 aaKnown RBP22.98■■□□□ 1.27
COPS7A-210ENST00000539735 BCL11BQ9C0K0 894 aaPredicted RBP22.98■■□□□ 1.27
COPS7A-210ENST00000539735 KRT24Q2M2I5 525 aa22.98■■□□□ 1.27
COPS7A-210ENST00000539735 PTF1AQ7RTS3 328 aa22.98■■□□□ 1.27
COPS7A-210ENST00000539735 CHMP4BQ9H444 224 aaKnown RBP22.98■■□□□ 1.27
COPS7A-210ENST00000539735 MIS18AQ9NYP9 233 aa22.98■■□□□ 1.27
COPS7A-210ENST00000539735 APBA3O96018 575 aa22.97■■□□□ 1.27
COPS7A-210ENST00000539735 PRIM1P49642 420 aaKnown RBP22.97■■□□□ 1.27
COPS7A-210ENST00000539735 MAP3K5Q99683 1374 aa22.97■■□□□ 1.27
COPS7A-210ENST00000539735 NKX1-1Q15270 411 aaPredicted RBP22.96■■□□□ 1.27
COPS7A-210ENST00000539735 SMC5Q8IY18 1101 aa22.96■■□□□ 1.27
COPS7A-210ENST00000539735 TSPYL4Q9UJ04 414 aa22.96■■□□□ 1.27
COPS7A-210ENST00000539735 HSP90AB1P08238 724 aaKnown RBP22.95■■□□□ 1.26
COPS7A-210ENST00000539735 AKAP4Q5JQC9 854 aa22.94■■□□□ 1.26
COPS7A-210ENST00000539735 DEFB132Q7Z7B7 95 aa22.94■■□□□ 1.26
COPS7A-210ENST00000539735 UPF2Q9HAU5 1272 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms