RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 TSPYL4Q9UJ04 414 aa16.16■□□□□ 0.18
UBE3B-209ENST00000539584 ZDHHC9Q9Y397 364 aa16.16■□□□□ 0.18
UBE3B-209ENST00000539584 BRD1O95696 1058 aa16.15■□□□□ 0.18
UBE3B-209ENST00000539584 KRT24Q2M2I5 525 aa16.15■□□□□ 0.18
UBE3B-209ENST00000539584 ZGPATQ8N5A5 531 aaKnown RBP16.15■□□□□ 0.18
UBE3B-209ENST00000539584 TMX3Q96JJ7 454 aa16.15■□□□□ 0.18
UBE3B-209ENST00000539584 NEK4P51957 841 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 CCDC30Q5VVM6 783 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 FLT4P35916 1363 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 MX1P20591 662 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 ATP8B2P98198 1209 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 PKP1Q13835 747 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 GPT2Q8TD30 523 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 ESF1Q9H501 851 aaKnown RBP16.14■□□□□ 0.17
UBE3B-209ENST00000539584 TMEM2Q9UHN6 1383 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 PXDNLA1KZ92 1463 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 DIP2BQ9P265 1576 aa16.14■□□□□ 0.17
UBE3B-209ENST00000539584 NCKAP5LQ9HCH0 1330 aa16.13■□□□□ 0.17
UBE3B-209ENST00000539584 PHF14O94880 888 aa16.13■□□□□ 0.17
UBE3B-209ENST00000539584 PRIM1P49642 420 aaKnown RBP16.13■□□□□ 0.17
UBE3B-209ENST00000539584 FAM69CQ0P6D2 419 aa16.13■□□□□ 0.17
UBE3B-209ENST00000539584 CSPP1Q1MSJ5 1256 aa16.13■□□□□ 0.17
UBE3B-209ENST00000539584 HSP90AB2PQ58FF8 381 aa16.13■□□□□ 0.17
UBE3B-209ENST00000539584 RBSNQ9H1K0 784 aa16.13■□□□□ 0.17
UBE3B-209ENST00000539584 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
UBE3B-209ENST00000539584 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
UBE3B-209ENST00000539584 PEAK1Q9H792 1746 aa16.12■□□□□ 0.17
UBE3B-209ENST00000539584 APBB1O00213 710 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 SLC4A10Q6U841 1118 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 KIAA1211Q6ZU35 1233 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 CCDC39Q9UFE4 941 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 IGSF1Q8N6C5 1336 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 TNRQ92752 1358 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 CHMLP26374 656 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 MTHFSDQ2M296 383 aaKnown RBP16.11■□□□□ 0.17
UBE3B-209ENST00000539584 PDCL3Q9H2J4 239 aa16.11■□□□□ 0.17
UBE3B-209ENST00000539584 MAP3K19Q56UN5 1328 aa16.1■□□□□ 0.17
UBE3B-209ENST00000539584 PLEKHG1Q9ULL1 1385 aa16.1■□□□□ 0.17
UBE3B-209ENST00000539584 ADAMTS13Q76LX8 1427 aa16.1■□□□□ 0.17
UBE3B-209ENST00000539584 RAB11FIP3O75154 756 aa16.1■□□□□ 0.17
UBE3B-209ENST00000539584 FLIIQ13045 1269 aa16.1■□□□□ 0.17
UBE3B-209ENST00000539584 ZKSCAN5Q9Y2L8 839 aa16.1■□□□□ 0.17
UBE3B-209ENST00000539584 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
UBE3B-209ENST00000539584 TMEM63CQ9P1W3 806 aa16.09■□□□□ 0.17
UBE3B-209ENST00000539584 CACNA1FO60840 1977 aa16.09■□□□□ 0.17
UBE3B-209ENST00000539584 G2E3Q7L622 706 aa16.09■□□□□ 0.17
UBE3B-209ENST00000539584 TUBGCP6Q96RT7 1819 aa16.09■□□□□ 0.17
UBE3B-209ENST00000539584 WDR33Q9C0J8 1336 aaKnown RBP16.09■□□□□ 0.17
UBE3B-209ENST00000539584 AK9Q5TCS8 1911 aa16.08■□□□□ 0.17
UBE3B-209ENST00000539584 MAP7D2Q96T17 732 aa16.08■□□□□ 0.16
UBE3B-209ENST00000539584 LRRC37A3O60309 1634 aa16.08■□□□□ 0.16
UBE3B-209ENST00000539584 F6X3S4 739 aa16.07■□□□□ 0.16
UBE3B-209ENST00000539584 PLEKHG5O94827 1062 aa16.07■□□□□ 0.16
UBE3B-209ENST00000539584 EXOC6BQ9Y2D4 811 aa16.07■□□□□ 0.16
UBE3B-209ENST00000539584 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-209ENST00000539584 N4BP2Q86UW6 1770 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-209ENST00000539584 FMN2Q9NZ56 1722 aa16.07■□□□□ 0.16
UBE3B-209ENST00000539584 LETM1O95202 739 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-209ENST00000539584 FKBP5Q13451 457 aaPredicted RBP16.07■□□□□ 0.16
UBE3B-209ENST00000539584 UVSSAQ2YD98 709 aa16.07■□□□□ 0.16
UBE3B-209ENST00000539584 ANO2Q9NQ90 1003 aa16.07■□□□□ 0.16
UBE3B-209ENST00000539584 SYCE3A1L190 88 aa16.06■□□□□ 0.16
UBE3B-209ENST00000539584 GNAT3A8MTJ3 354 aa16.06■□□□□ 0.16
UBE3B-209ENST00000539584 TMEM87AQ8NBN3 555 aa16.06■□□□□ 0.16
UBE3B-209ENST00000539584 TRIM6-TRIM34B2RNG4 842 aa16.06■□□□□ 0.16
UBE3B-209ENST00000539584 HSPA4P34932 840 aa16.06■□□□□ 0.16
UBE3B-209ENST00000539584 UBR1Q8IWV7 1749 aa16.06■□□□□ 0.16
UBE3B-209ENST00000539584 SSH3Q8TE77 659 aa16.06■□□□□ 0.16
UBE3B-209ENST00000539584 TSPY26PQ9H489 355 aa16.06■□□□□ 0.16
UBE3B-209ENST00000539584 XRN1Q8IZH2 1706 aaKnown RBP16.05■□□□□ 0.16
UBE3B-209ENST00000539584 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
UBE3B-209ENST00000539584 MTERF4Q7Z6M4 381 aaKnown RBP16.04■□□□□ 0.16
UBE3B-209ENST00000539584 RILPL2Q969X0 211 aa16.04■□□□□ 0.16
UBE3B-209ENST00000539584 EYA1Q99502 592 aa16.04■□□□□ 0.16
UBE3B-209ENST00000539584 MIS18AQ9NYP9 233 aa16.04■□□□□ 0.16
UBE3B-209ENST00000539584 RBM27Q9P2N5 1060 aaKnown RBP16.04■□□□□ 0.16
UBE3B-209ENST00000539584 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
UBE3B-209ENST00000539584 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
UBE3B-209ENST00000539584 UBTFL1P0CB47 393 aaPredicted RBP16.04■□□□□ 0.16
UBE3B-209ENST00000539584 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
UBE3B-209ENST00000539584 AMPHP49418 695 aa16.04■□□□□ 0.16
UBE3B-209ENST00000539584 MLECQ14165 292 aa16.04■□□□□ 0.16
UBE3B-209ENST00000539584 FOXO3O43524 673 aa16.03■□□□□ 0.16
UBE3B-209ENST00000539584 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
UBE3B-209ENST00000539584 HSP90AB4PQ58FF6 505 aa16.03■□□□□ 0.16
UBE3B-209ENST00000539584 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.03■□□□□ 0.16
UBE3B-209ENST00000539584 ATP6V1DQ9Y5K8 247 aa16.03■□□□□ 0.16
UBE3B-209ENST00000539584 PALD1Q9ULE6 856 aa16.02■□□□□ 0.16
UBE3B-209ENST00000539584 HOXB7P09629 217 aa16.02■□□□□ 0.15
UBE3B-209ENST00000539584 USP44Q9H0E7 712 aa16.02■□□□□ 0.15
UBE3B-209ENST00000539584 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.02■□□□□ 0.15
UBE3B-209ENST00000539584 MAP3K5Q99683 1374 aa16.01■□□□□ 0.15
UBE3B-209ENST00000539584 POLA2Q14181 598 aa16.01■□□□□ 0.15
UBE3B-209ENST00000539584 CYB5RLQ6IPT4 315 aa16.01■□□□□ 0.15
UBE3B-209ENST00000539584 KIF1BPQ96EK5 621 aa16.01■□□□□ 0.15
UBE3B-209ENST00000539584 LRRFIP2Q9Y608 721 aaKnown RBP16.01■□□□□ 0.15
UBE3B-209ENST00000539584 RAD50Q92878 1312 aa16.01■□□□□ 0.15
UBE3B-209ENST00000539584 CEP170BQ9Y4F5 1589 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms